RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 TECPR2O15040 1411 aa-0.04□□□□□ -2.42
CLK1-209ENST00000472679 CC2D2AQ9P2K1 1620 aa-0.05□□□□□ -2.42
CLK1-209ENST00000472679 DSPPQ9NZW4 1301 aa-0.05□□□□□ -2.42
CLK1-209ENST00000472679 ADGRB1O14514 1584 aa-0.05□□□□□ -2.42
CLK1-209ENST00000472679 RPS3P23396 243 aaKnown RBP eCLIP-0.05□□□□□ -2.42
CLK1-209ENST00000472679 KRTAP6-1Q3LI64 71 aa-0.05□□□□□ -2.42
CLK1-209ENST00000472679 CSAG1Q6PB30 78 aa-0.05□□□□□ -2.42
CLK1-209ENST00000472679 OR4B1Q8NGF8 309 aa-0.05□□□□□ -2.42
CLK1-209ENST00000472679 OR5AK2Q8NH90 309 aa-0.05□□□□□ -2.42
CLK1-209ENST00000472679 ASXL1Q8IXJ9 1541 aa-0.05□□□□□ -2.42
CLK1-209ENST00000472679 NKTRP30414 1462 aaKnown RBP-0.05□□□□□ -2.42
CLK1-209ENST00000472679 ABCC10Q5T3U5 1492 aa-0.05□□□□□ -2.42
CLK1-209ENST00000472679 PXDNQ92626 1479 aa-0.05□□□□□ -2.42
CLK1-209ENST00000472679 CFAP43Q8NDM7 1665 aa-0.05□□□□□ -2.42
CLK1-209ENST00000472679 DISP2A7MBM2 1401 aa-0.05□□□□□ -2.42
CLK1-209ENST00000472679 PAPPAQ13219 1627 aa-0.05□□□□□ -2.42
CLK1-209ENST00000472679 PKDREJQ9NTG1 2253 aa-0.06□□□□□ -2.42
CLK1-209ENST00000472679 MYO7AQ13402 2215 aa-0.06□□□□□ -2.42
CLK1-209ENST00000472679 MAPKBP1O60336 1514 aa-0.06□□□□□ -2.42
CLK1-209ENST00000472679 CPS1P31327 1500 aa-0.06□□□□□ -2.42
CLK1-209ENST00000472679 TRACP01848 142 aa-0.06□□□□□ -2.42
CLK1-209ENST00000472679 FABP2P12104 132 aa-0.06□□□□□ -2.42
CLK1-209ENST00000472679 CLEC2BQ92478 149 aa-0.06□□□□□ -2.42
CLK1-209ENST00000472679 LINC00208Q96KT6 92 aa-0.06□□□□□ -2.42
CLK1-209ENST00000472679 HOPXQ9BPY8 73 aaPredicted RBP-0.06□□□□□ -2.42
CLK1-209ENST00000472679 GRIN2AQ12879 1464 aa-0.06□□□□□ -2.42
CLK1-209ENST00000472679 NRXN1Q9ULB1 1477 aa-0.06□□□□□ -2.42
CLK1-209ENST00000472679 SMG6Q86US8 1419 aaKnown RBP-0.06□□□□□ -2.42
CLK1-209ENST00000472679 TRAPPC8Q9Y2L5 1435 aa-0.06□□□□□ -2.42
CLK1-209ENST00000472679 DCAF1Q9Y4B6 1507 aa-0.07□□□□□ -2.42
CLK1-209ENST00000472679 ABCA1O95477 2261 aa-0.07□□□□□ -2.42
CLK1-209ENST00000472679 MYOM1P52179 1685 aa-0.07□□□□□ -2.42
CLK1-209ENST00000472679 CUL7Q14999 1698 aa-0.07□□□□□ -2.42
CLK1-209ENST00000472679 ERVK-7P63135 1459 aa-0.07□□□□□ -2.42
CLK1-209ENST00000472679 TRDV1A0A1B0GX56 115 aa-0.07□□□□□ -2.42
CLK1-209ENST00000472679 C5orf58C9J3I9 102 aa-0.07□□□□□ -2.42
CLK1-209ENST00000472679 H7BYZ3 331 aa-0.07□□□□□ -2.42
CLK1-209ENST00000472679 M0R2T5 61 aa-0.07□□□□□ -2.42
CLK1-209ENST00000472679 NUBP2Q9Y5Y2 271 aa-0.07□□□□□ -2.42
CLK1-209ENST00000472679 KIAA0556O60303 1618 aa-0.07□□□□□ -2.42
CLK1-209ENST00000472679 ABCC5O15440 1437 aa-0.07□□□□□ -2.42
CLK1-209ENST00000472679 FGD6Q6ZV73 1430 aa-0.07□□□□□ -2.42
CLK1-209ENST00000472679 UNC13BO14795 1591 aa-0.07□□□□□ -2.42
CLK1-209ENST00000472679 ZC3H13Q5T200 1668 aaKnown RBP-0.08□□□□□ -2.42
CLK1-209ENST00000472679 RREB1Q92766 1687 aa-0.08□□□□□ -2.42
CLK1-209ENST00000472679 KIAA1549LQ6ZVL6 1849 aa-0.08□□□□□ -2.42
CLK1-209ENST00000472679 C1orf167Q5SNV9 1468 aa-0.08□□□□□ -2.42
CLK1-209ENST00000472679 LRRC37A3O60309 1634 aa-0.08□□□□□ -2.42
CLK1-209ENST00000472679 A0A1W2PRS3 328 aa-0.08□□□□□ -2.42
CLK1-209ENST00000472679 PRORSD1PA6NEY8 169 aa-0.08□□□□□ -2.42
CLK1-209ENST00000472679 EVI2AP22794 236 aa-0.08□□□□□ -2.42
CLK1-209ENST00000472679 RPL37P61927 97 aaKnown RBP-0.08□□□□□ -2.42
CLK1-209ENST00000472679 SNRPD3P62318 126 aaKnown RBP-0.08□□□□□ -2.42
CLK1-209ENST00000472679 MT1HP80294 61 aa-0.08□□□□□ -2.42
CLK1-209ENST00000472679 BASP1P80723 227 aaKnown RBP-0.08□□□□□ -2.42
CLK1-209ENST00000472679 STX19Q8N4C7 294 aa-0.08□□□□□ -2.42
CLK1-209ENST00000472679 FAM24BQ8N5W8 94 aa-0.08□□□□□ -2.42
CLK1-209ENST00000472679 DEFB104AQ8WTQ1 72 aa-0.08□□□□□ -2.42
CLK1-209ENST00000472679 DYDC1Q8WWB3 177 aa-0.08□□□□□ -2.42
CLK1-209ENST00000472679 AP1S3Q96PC3 154 aa-0.08□□□□□ -2.42
CLK1-209ENST00000472679 ANKRD31Q8N7Z5 1873 aa-0.08□□□□□ -2.42
CLK1-209ENST00000472679 USP54Q70EL1 1684 aa-0.08□□□□□ -2.42
CLK1-209ENST00000472679 ANK1P16157 1881 aa-0.09□□□□□ -2.42
CLK1-209ENST00000472679 PEG3Q9GZU2 1588 aa-0.09□□□□□ -2.42
CLK1-209ENST00000472679 ARHGAP31Q2M1Z3 1444 aa-0.09□□□□□ -2.42
CLK1-209ENST00000472679 GABARAPH6UMI1 98 aa-0.09□□□□□ -2.42
CLK1-209ENST00000472679 NDUFA6P56556 154 aa-0.09□□□□□ -2.42
CLK1-209ENST00000472679 TCTAP57738 103 aa-0.09□□□□□ -2.42
CLK1-209ENST00000472679 ZNF56Q15929 161 aa-0.09□□□□□ -2.42
CLK1-209ENST00000472679 SPINK13Q1W4C9 94 aa-0.09□□□□□ -2.42
CLK1-209ENST00000472679 IZUMO2Q6UXV1 221 aa-0.09□□□□□ -2.42
CLK1-209ENST00000472679 KRTAP8-1Q8IUC2 63 aa-0.09□□□□□ -2.42
CLK1-209ENST00000472679 OR5H6Q8NGV6 325 aa-0.09□□□□□ -2.42
CLK1-209ENST00000472679 CIB3Q96Q77 187 aaPredicted RBP-0.09□□□□□ -2.42
CLK1-209ENST00000472679 LAMTOR3Q9UHA4 124 aa-0.09□□□□□ -2.42
CLK1-209ENST00000472679 AKAP6Q13023 2319 aa-0.09□□□□□ -2.42
CLK1-209ENST00000472679 PLEKHH2Q8IVE3 1493 aa-0.1□□□□□ -2.42
CLK1-209ENST00000472679 MLH3Q9UHC1 1453 aa-0.1□□□□□ -2.42
CLK1-209ENST00000472679 RAPGEF2Q9Y4G8 1499 aa-0.1□□□□□ -2.42
CLK1-209ENST00000472679 ZNF831Q5JPB2 1677 aa-0.1□□□□□ -2.43
CLK1-209ENST00000472679 NBDYA0A0U1RRE5 68 aa-0.1□□□□□ -2.43
CLK1-209ENST00000472679 LYNX1G3V0Z9 82 aa-0.1□□□□□ -2.43
CLK1-209ENST00000472679 GYPBP06028 91 aa-0.1□□□□□ -2.43
CLK1-209ENST00000472679 MT1BP07438 61 aa-0.1□□□□□ -2.43
CLK1-209ENST00000472679 FXYD3Q14802 87 aa-0.1□□□□□ -2.43
CLK1-209ENST00000472679 ARHGEF10O15013 1369 aa-0.1□□□□□ -2.43
CLK1-209ENST00000472679 GAPVD1Q14C86 1478 aa-0.1□□□□□ -2.43
CLK1-209ENST00000472679 TEX14Q8IWB6 1497 aa-0.1□□□□□ -2.43
CLK1-209ENST00000472679 MBD5Q9P267 1494 aa-0.1□□□□□ -2.43
CLK1-209ENST00000472679 DNMBPQ6XZF7 1577 aa-0.11□□□□□ -2.43
CLK1-209ENST00000472679 RB1CC1Q8TDY2 1594 aa-0.11□□□□□ -2.43
CLK1-209ENST00000472679 UGGT1Q9NYU2 1555 aa-0.11□□□□□ -2.43
CLK1-209ENST00000472679 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.11□□□□□ -2.43
CLK1-209ENST00000472679 ARHGEF12Q9NZN5 1544 aa-0.11□□□□□ -2.43
CLK1-209ENST00000472679 F5P12259 2224 aa-0.11□□□□□ -2.43
CLK1-209ENST00000472679 DEFB121Q5J5C9 76 aa-0.11□□□□□ -2.43
CLK1-209ENST00000472679 PRELID3AQ96N28 172 aa-0.11□□□□□ -2.43
CLK1-209ENST00000472679 FKBP11Q9NYL4 201 aa-0.11□□□□□ -2.43
CLK1-209ENST00000472679 ABCA3Q99758 1704 aa-0.11□□□□□ -2.43
CLK1-209ENST00000472679 A2MP01023 1474 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms