RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 NACAE9PAV3 2078 aa6.37□□□□□ -1.39
SF3A1-206ENST00000471037 LRP1BQ9NZR2 4599 aa6.37□□□□□ -1.39
SF3A1-206ENST00000471037 H3BVH4 76 aa6.37□□□□□ -1.39
SF3A1-206ENST00000471037 SNAI2O43623 268 aa6.37□□□□□ -1.39
SF3A1-206ENST00000471037 ARMS2P0C7Q2 107 aa6.37□□□□□ -1.39
SF3A1-206ENST00000471037 RNASE3P12724 160 aaKnown RBP6.37□□□□□ -1.39
SF3A1-206ENST00000471037 TCL1AP56279 114 aa6.37□□□□□ -1.39
SF3A1-206ENST00000471037 WDR73Q6P4I2 378 aa6.37□□□□□ -1.39
SF3A1-206ENST00000471037 C11orf72Q8NBR9 251 aa6.37□□□□□ -1.39
SF3A1-206ENST00000471037 NUP35Q8NFH5 326 aa6.37□□□□□ -1.39
SF3A1-206ENST00000471037 BORCS7Q96B45 105 aa6.37□□□□□ -1.39
SF3A1-206ENST00000471037 C9orf85Q96MD7 179 aa6.37□□□□□ -1.39
SF3A1-206ENST00000471037 TPPP3Q9BW30 176 aa6.37□□□□□ -1.39
SF3A1-206ENST00000471037 CNFNQ9BYD5 112 aa6.37□□□□□ -1.39
SF3A1-206ENST00000471037 SCRT2Q9NQ03 307 aa6.37□□□□□ -1.39
SF3A1-206ENST00000471037 A0A1B0GUT8 65 aa6.36□□□□□ -1.39
SF3A1-206ENST00000471037 SNURFLB1AK76 121 aa6.36□□□□□ -1.39
SF3A1-206ENST00000471037 HTN3P15516 51 aa6.36□□□□□ -1.39
SF3A1-206ENST00000471037 AZU1P20160 251 aa6.36□□□□□ -1.39
SF3A1-206ENST00000471037 DAD1P61803 113 aa6.36□□□□□ -1.39
SF3A1-206ENST00000471037 CACNG7P62955 275 aa6.36□□□□□ -1.39
SF3A1-206ENST00000471037 LYZL1Q6UWQ5 148 aa6.36□□□□□ -1.39
SF3A1-206ENST00000471037 ATP5L2Q7Z4Y8 100 aa6.36□□□□□ -1.39
SF3A1-206ENST00000471037 CBLN2Q8IUK8 224 aa6.36□□□□□ -1.39
SF3A1-206ENST00000471037 PTH2Q96A98 100 aa6.36□□□□□ -1.39
SF3A1-206ENST00000471037 PGLYRP4Q96LB8 373 aa6.36□□□□□ -1.39
SF3A1-206ENST00000471037 SPXQ9BT56 116 aa6.36□□□□□ -1.39
SF3A1-206ENST00000471037 MDFICQ9P1T7 246 aa6.36□□□□□ -1.39
SF3A1-206ENST00000471037 PHLDA3Q9Y5J5 127 aa6.36□□□□□ -1.39
SF3A1-206ENST00000471037 URGCP-MRPS24S4R325 110 aa6.36□□□□□ -1.39
SF3A1-206ENST00000471037 TRBV24-1A0A075B6N3 115 aa6.35□□□□□ -1.39
SF3A1-206ENST00000471037 A0A1B0GW15 77 aa6.35□□□□□ -1.39
SF3A1-206ENST00000471037 C16orf90A8MZG2 172 aa6.35□□□□□ -1.39
SF3A1-206ENST00000471037 M0R2P5 195 aa6.35□□□□□ -1.39
SF3A1-206ENST00000471037 SCO1O75880 301 aa6.35□□□□□ -1.39
SF3A1-206ENST00000471037 NXPH4O95158 308 aa6.35□□□□□ -1.39
SF3A1-206ENST00000471037 PRM2P04554 102 aa6.35□□□□□ -1.39
SF3A1-206ENST00000471037 TNP2Q05952 138 aa6.35□□□□□ -1.39
SF3A1-206ENST00000471037 DAZ2Q13117 558 aaKnown RBP6.35□□□□□ -1.39
SF3A1-206ENST00000471037 RIGQ13278 110 aa6.35□□□□□ -1.39
SF3A1-206ENST00000471037 ELOBQ15370 118 aa6.35□□□□□ -1.39
SF3A1-206ENST00000471037 PIK3CD-AS1Q5SR53 167 aa6.35□□□□□ -1.39
SF3A1-206ENST00000471037 SPANXN1Q5VSR9 72 aa6.35□□□□□ -1.39
SF3A1-206ENST00000471037 ZFP82Q8N141 532 aa6.35□□□□□ -1.39
SF3A1-206ENST00000471037 SYT8Q8NBV8 401 aa6.35□□□□□ -1.39
SF3A1-206ENST00000471037 GSN-AS1Q9NRJ2 163 aa6.35□□□□□ -1.39
SF3A1-206ENST00000471037 TIMM8BQ9Y5J9 83 aaPredicted RBP6.35□□□□□ -1.39
SF3A1-206ENST00000471037 NBDYA0A0U1RRE5 68 aa6.34□□□□□ -1.39
SF3A1-206ENST00000471037 PLAC8L1A1L4L8 177 aa6.34□□□□□ -1.39
SF3A1-206ENST00000471037 LYRM9A8MSI8 78 aa6.34□□□□□ -1.39
SF3A1-206ENST00000471037 S100A8P05109 93 aa6.34□□□□□ -1.39
SF3A1-206ENST00000471037 RASL11AQ6T310 242 aa6.34□□□□□ -1.39
SF3A1-206ENST00000471037 C6orf223Q8N319 242 aa6.34□□□□□ -1.39
SF3A1-206ENST00000471037 MAPKAPK5-AS1Q8N8E1 139 aa6.34□□□□□ -1.39
SF3A1-206ENST00000471037 OR10AG1Q8NH19 301 aa6.34□□□□□ -1.39
SF3A1-206ENST00000471037 ZNRF2Q8NHG8 242 aa6.34□□□□□ -1.39
SF3A1-206ENST00000471037 YPEL4Q96NS1 127 aa6.34□□□□□ -1.39
SF3A1-206ENST00000471037 A0A1B0GXF2 115 aa6.33□□□□□ -1.4
SF3A1-206ENST00000471037 M0R381 172 aa6.33□□□□□ -1.4
SF3A1-206ENST00000471037 SPINK4O60575 86 aa6.33□□□□□ -1.4
SF3A1-206ENST00000471037 NTF3P20783 257 aa6.33□□□□□ -1.4
SF3A1-206ENST00000471037 HBBP68871 147 aa6.33□□□□□ -1.4
SF3A1-206ENST00000471037 TWIST1Q15672 202 aa6.33□□□□□ -1.4
SF3A1-206ENST00000471037 COX19Q49B96 90 aa6.33□□□□□ -1.4
SF3A1-206ENST00000471037 MRPL54Q6P161 138 aaKnown RBP6.33□□□□□ -1.4
SF3A1-206ENST00000471037 APOBP04114 4563 aaKnown RBP6.32□□□□□ -1.4
SF3A1-206ENST00000471037 TGIF2-C20orf24A0A0A6YYL0 155 aa6.32□□□□□ -1.4
SF3A1-206ENST00000471037 MUC21A0A0G2JKD1 596 aa6.32□□□□□ -1.4
SF3A1-206ENST00000471037 MUC21A0A140T8X8 626 aa6.32□□□□□ -1.4
SF3A1-206ENST00000471037 TRGC1P0CF51 173 aa6.32□□□□□ -1.4
SF3A1-206ENST00000471037 ZNF876PQ49A33 203 aa6.32□□□□□ -1.4
SF3A1-206ENST00000471037 SMIM15Q7Z3B0 74 aa6.32□□□□□ -1.4
SF3A1-206ENST00000471037 Q8N1X5 172 aa6.32□□□□□ -1.4
SF3A1-206ENST00000471037 RASL10AQ92737 203 aa6.32□□□□□ -1.4
SF3A1-206ENST00000471037 AP1S3Q96PC3 154 aa6.32□□□□□ -1.4
SF3A1-206ENST00000471037 NOP10Q9NPE3 64 aaKnown RBP6.32□□□□□ -1.4
SF3A1-206ENST00000471037 TRGV1A0A0A0MS02 117 aa6.31□□□□□ -1.4
SF3A1-206ENST00000471037 A8MWV9 139 aa6.31□□□□□ -1.4
SF3A1-206ENST00000471037 CAMPP49913 170 aa6.31□□□□□ -1.4
SF3A1-206ENST00000471037 SSTP61278 116 aa6.31□□□□□ -1.4
SF3A1-206ENST00000471037 LINC00612Q8N6U2 182 aa6.31□□□□□ -1.4
SF3A1-206ENST00000471037 GATD1Q8NB37 220 aa6.31□□□□□ -1.4
SF3A1-206ENST00000471037 TMEM191AQ9H0A3 160 aa6.31□□□□□ -1.4
SF3A1-206ENST00000471037 MRPL16Q9NX20 251 aaKnown RBP6.31□□□□□ -1.4
SF3A1-206ENST00000471037 DNAH5Q8TE73 4624 aa6.31□□□□□ -1.4
SF3A1-206ENST00000471037 COLCA2A8K830 154 aa6.3□□□□□ -1.4
SF3A1-206ENST00000471037 F5H768 121 aa6.3□□□□□ -1.4
SF3A1-206ENST00000471037 HLA-DQA1P01909 254 aa6.3□□□□□ -1.4
SF3A1-206ENST00000471037 MT-ND6P03923 174 aa6.3□□□□□ -1.4
SF3A1-206ENST00000471037 ATP5G1P05496 136 aa6.3□□□□□ -1.4
SF3A1-206ENST00000471037 SMIM17P0DL12 118 aa6.3□□□□□ -1.4
SF3A1-206ENST00000471037 DEFB130BP0DP73 79 aa6.3□□□□□ -1.4
SF3A1-206ENST00000471037 DEFB130AP0DP74 79 aa6.3□□□□□ -1.4
SF3A1-206ENST00000471037 CCL18P55774 89 aa6.3□□□□□ -1.4
SF3A1-206ENST00000471037 Q6ZTI0 123 aa6.3□□□□□ -1.4
SF3A1-206ENST00000471037 C18orf15Q96N68 181 aa6.3□□□□□ -1.4
SF3A1-206ENST00000471037 GNB1LQ9BYB4 327 aa6.3□□□□□ -1.4
SF3A1-206ENST00000471037 MSRB1Q9NZV6 116 aa6.3□□□□□ -1.4
SF3A1-206ENST00000471037 LINC00588Q9Y4M8 146 aa6.3□□□□□ -1.4
SF3A1-206ENST00000471037 TRGV2A0A075B6R0 118 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms