RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 ASIPP42127 132 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 RPS20P60866 119 aaKnown RBP2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 GAGE2BQ13066 116 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 DEFB135Q30KP9 77 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 GAGE2EQ4V326 116 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 Q6AWC8 147 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 GAGE2AQ6NT46 116 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 MRPL54Q6P161 138 aaKnown RBP2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 KCNIP4Q6PIL6 250 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 LYZL1Q6UWQ5 148 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 FAM231DQ6ZW35 169 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 COX8CQ7Z4L0 72 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 CBLN2Q8IUK8 224 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 TSKUQ8WUA8 353 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 BORCS7Q96B45 105 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 KCNS1Q96KK3 526 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 RCHY1Q96PM5 261 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 KRTAP1-5Q9BYS1 174 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 RETNQ9HD89 108 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 GSN-AS1Q9NRJ2 163 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 SMCO4Q9NRQ5 59 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 IL36BQ9NZH7 164 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 MDFICQ9P1T7 246 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 GAGE2DQ9UEU5 116 aa2.94□□□□□ -1.94
TMEM39A-204ENST00000468545 DNAH3Q8TD57 4116 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 A0A087WWC5 75 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 TGIF2-C20orf24A0A0A6YYL0 155 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 IGHV3-16A0A0C4DH30 117 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 KIR2DL5BA0A0G2JN68 375 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 KIR2DL5BA0A0G2JPC4 375 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 HIGD1CA8MV81 97 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 M0R381 172 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 UBE2CO00762 179 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 RAB4BP61018 213 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 DEFA6Q01524 100 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 GAGE5Q13069 117 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 GAGE6Q13070 117 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 RIGQ13278 110 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 UBE2V1Q13404 147 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 RRN3P1Q2M238 152 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 SPANXN1Q5VSR9 72 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 SBSPONQ8IVN8 264 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 KIR2DL5AQ8N109 375 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 TMEM256Q8N2U0 113 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 FER1L6-AS1Q8NA97 138 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 CSNK1G2-AS1Q8NCQ2 148 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 NUP35Q8NFH5 326 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 OR11H2Q8NH07 326 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 KIR2DL5BQ8NHK3 375 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 GTSF1Q8WW33 167 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 C20orf144Q9BQM9 153 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 PYGO2Q9BRQ0 406 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 NAT8BQ9UHF3 227 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 PHLDA3Q9Y5J5 127 aa2.93□□□□□ -1.94
TMEM39A-204ENST00000468545 VWFP04275 2813 aa2.92□□□□□ -1.94
TMEM39A-204ENST00000468545 TRGV1A0A0A0MS02 117 aa2.92□□□□□ -1.94
TMEM39A-204ENST00000468545 IGHV3-73A0A0B4J1V6 119 aa2.92□□□□□ -1.94
TMEM39A-204ENST00000468545 SMIM27A0A1W2PRY6 76 aa2.92□□□□□ -1.94
TMEM39A-204ENST00000468545 SNURFLB1AK76 121 aa2.92□□□□□ -1.94
TMEM39A-204ENST00000468545 CXCL1P09341 107 aa2.92□□□□□ -1.94
TMEM39A-204ENST00000468545 VPREB1P12018 145 aa2.92□□□□□ -1.94
TMEM39A-204ENST00000468545 RNASE3P12724 160 aaKnown RBP2.92□□□□□ -1.94
TMEM39A-204ENST00000468545 NTF3P20783 257 aa2.92□□□□□ -1.94
TMEM39A-204ENST00000468545 FOXA3P55318 350 aaPredicted RBP2.92□□□□□ -1.94
TMEM39A-204ENST00000468545 ZNF415Q09FC8 603 aa2.92□□□□□ -1.94
TMEM39A-204ENST00000468545 ELOBQ15370 118 aa2.92□□□□□ -1.94
TMEM39A-204ENST00000468545 KPRPQ5T749 579 aaPredicted RBP2.92□□□□□ -1.94
TMEM39A-204ENST00000468545 NFE4Q86UQ8 179 aa2.92□□□□□ -1.94
TMEM39A-204ENST00000468545 OR10AG1Q8NH19 301 aa2.92□□□□□ -1.94
TMEM39A-204ENST00000468545 FAM210BQ96KR6 192 aa2.92□□□□□ -1.94
TMEM39A-204ENST00000468545 GFRA4Q9GZZ7 299 aa2.92□□□□□ -1.94
TMEM39A-204ENST00000468545 NOP10Q9NPE3 64 aaKnown RBP2.92□□□□□ -1.94
TMEM39A-204ENST00000468545 TMEM242Q9NWH2 141 aa2.92□□□□□ -1.94
TMEM39A-204ENST00000468545 MRPL16Q9NX20 251 aaKnown RBP2.92□□□□□ -1.94
TMEM39A-204ENST00000468545 DNHD1Q96M86 4753 aa2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 A0A1B0GUT8 65 aa2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 COLCA2A8K830 154 aa2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 F2Z2F3 143 aa2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 IGHV3-53P01767 116 aa2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 MGPP08493 103 aa2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 IGLC6P0CF74 106 aa2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 SMIM17P0DL12 118 aa2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 DEFB130BP0DP73 79 aa2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 DEFB130AP0DP74 79 aa2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 RPS10P46783 165 aaKnown RBP2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 SNRPEP62304 92 aaKnown RBP2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 CACNG7P62955 275 aa2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 RPL24P83731 157 aaKnown RBP2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 FABP9Q0Z7S8 132 aa2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 TDRG1Q3Y452 100 aa2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 ZNF876PQ49A33 203 aa2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 ZNF705AQ6ZN79 300 aaPredicted RBP2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 SMIM15Q7Z3B0 74 aa2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 SMIM29Q86T20 159 aa2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 C14orf178Q8N769 122 aaPredicted RBP2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 TMEM263Q8WUH6 116 aaKnown RBP2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 FRZBQ92765 325 aa2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 C16orf74Q96GX8 76 aa2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 BTF3L4Q96K17 158 aa2.91□□□□□ -1.94
TMEM39A-204ENST00000468545 IMMP2LQ96T52 175 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms