RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 IFNA1P01562 189 aa10.28□□□□□ -0.76
ATG4B-215ENST00000468018 TAGLN2P37802 199 aaKnown RBP10.28□□□□□ -0.76
ATG4B-215ENST00000468018 VAX2Q9UIW0 290 aa10.28□□□□□ -0.76
ATG4B-215ENST00000468018 RAB19A4D1S5 217 aa10.27□□□□□ -0.77
ATG4B-215ENST00000468018 M0R381 172 aa10.27□□□□□ -0.77
ATG4B-215ENST00000468018 PRR27Q6MZM9 219 aa10.27□□□□□ -0.77
ATG4B-215ENST00000468018 ALKAL2Q6UX46 152 aa10.27□□□□□ -0.77
ATG4B-215ENST00000468018 C14orf178Q8N769 122 aaPredicted RBP10.27□□□□□ -0.77
ATG4B-215ENST00000468018 OR10AG1Q8NH19 301 aa10.27□□□□□ -0.77
ATG4B-215ENST00000468018 GTSF1LQ9H1H1 148 aa10.27□□□□□ -0.77
ATG4B-215ENST00000468018 LINC01556Q5JQF7 62 aa10.26□□□□□ -0.77
ATG4B-215ENST00000468018 LELP1Q5T871 98 aa10.26□□□□□ -0.77
ATG4B-215ENST00000468018 ATP6V0E2Q8NHE4 81 aa10.26□□□□□ -0.77
ATG4B-215ENST00000468018 IGHV3-38A0A0C4DH36 116 aa10.25□□□□□ -0.77
ATG4B-215ENST00000468018 IGLC6P0CF74 106 aa10.25□□□□□ -0.77
ATG4B-215ENST00000468018 GNG4P50150 75 aa10.25□□□□□ -0.77
ATG4B-215ENST00000468018 NKX2-5P52952 324 aaPredicted RBP10.25□□□□□ -0.77
ATG4B-215ENST00000468018 BLOC1S1P78537 153 aa10.25□□□□□ -0.77
ATG4B-215ENST00000468018 MED9Q9NWA0 146 aa10.25□□□□□ -0.77
ATG4B-215ENST00000468018 BOLA1Q9Y3E2 137 aa10.25□□□□□ -0.77
ATG4B-215ENST00000468018 TNFRSF18Q9Y5U5 241 aa10.25□□□□□ -0.77
ATG4B-215ENST00000468018 TRAV9-2A0A087WT02 112 aa10.24□□□□□ -0.77
ATG4B-215ENST00000468018 A0A087WWL8 130 aa10.24□□□□□ -0.77
ATG4B-215ENST00000468018 EVI2AP22794 236 aa10.24□□□□□ -0.77
ATG4B-215ENST00000468018 FAM74A4Q5TZK3 123 aa10.24□□□□□ -0.77
ATG4B-215ENST00000468018 C10orf126Q8N4M7 172 aa10.24□□□□□ -0.77
ATG4B-215ENST00000468018 TRBV10-1A0A0K0K1A3 114 aa10.23□□□□□ -0.77
ATG4B-215ENST00000468018 GAGE12JA6NER3 117 aa10.23□□□□□ -0.77
ATG4B-215ENST00000468018 GAGE1Q13065 139 aa10.23□□□□□ -0.77
ATG4B-215ENST00000468018 GAGE4Q13068 117 aa10.23□□□□□ -0.77
ATG4B-215ENST00000468018 GAGE5Q13069 117 aa10.23□□□□□ -0.77
ATG4B-215ENST00000468018 GAGE13Q4V321 117 aa10.23□□□□□ -0.77
ATG4B-215ENST00000468018 RYR1P21817 5038 aa10.22□□□□□ -0.77
ATG4B-215ENST00000468018 APOBP04114 4563 aaKnown RBP10.22□□□□□ -0.77
ATG4B-215ENST00000468018 TRAV8-6A0A0B4J262 113 aa10.22□□□□□ -0.77
ATG4B-215ENST00000468018 NDUFS6O75380 124 aaKnown RBP10.22□□□□□ -0.77
ATG4B-215ENST00000468018 NFE4Q86UQ8 179 aa10.22□□□□□ -0.77
ATG4B-215ENST00000468018 OR10G8Q8NGN5 311 aa10.22□□□□□ -0.77
ATG4B-215ENST00000468018 MSRB1Q9NZV6 116 aa10.22□□□□□ -0.77
ATG4B-215ENST00000468018 KIF25-AS1Q9Y6Z4 181 aa10.22□□□□□ -0.77
ATG4B-215ENST00000468018 HSPG2P98160 4391 aa10.21□□□□□ -0.77
ATG4B-215ENST00000468018 RBFOX3A6NFN3 312 aa10.21□□□□□ -0.77
ATG4B-215ENST00000468018 TMEM250H0YL14 139 aa10.21□□□□□ -0.77
ATG4B-215ENST00000468018 RPS20P60866 119 aaKnown RBP10.21□□□□□ -0.77
ATG4B-215ENST00000468018 RAB4BP61018 213 aa10.21□□□□□ -0.77
ATG4B-215ENST00000468018 OR10J3Q5JRS4 329 aa10.21□□□□□ -0.77
ATG4B-215ENST00000468018 BIN3Q9NQY0 253 aa10.21□□□□□ -0.77
ATG4B-215ENST00000468018 IBA57-AS1B1ANH7 110 aa10.2□□□□□ -0.78
ATG4B-215ENST00000468018 K7EN84 100 aa10.2□□□□□ -0.78
ATG4B-215ENST00000468018 GZMBP10144 247 aa10.2□□□□□ -0.78
ATG4B-215ENST00000468018 KRTAP10-2P60368 255 aa10.2□□□□□ -0.78
ATG4B-215ENST00000468018 UBE2D3P61077 147 aa10.2□□□□□ -0.78
ATG4B-215ENST00000468018 UBE2D2P62837 147 aa10.2□□□□□ -0.78
ATG4B-215ENST00000468018 SPANXN1Q5VSR9 72 aa10.2□□□□□ -0.78
ATG4B-215ENST00000468018 FER1L6-AS1Q8NA97 138 aa10.2□□□□□ -0.78
ATG4B-215ENST00000468018 OR2D3Q8NGH3 330 aa10.2□□□□□ -0.78
ATG4B-215ENST00000468018 A0A087WWC5 75 aa10.19□□□□□ -0.78
ATG4B-215ENST00000468018 MUC21A0A0G2JKD1 596 aa10.19□□□□□ -0.78
ATG4B-215ENST00000468018 MUC21A0A140T8X8 626 aa10.19□□□□□ -0.78
ATG4B-215ENST00000468018 P01737 135 aa10.19□□□□□ -0.78
ATG4B-215ENST00000468018 SPATA12Q7Z6I5 190 aa10.19□□□□□ -0.78
ATG4B-215ENST00000468018 OCC1Q8TAD7 63 aa10.19□□□□□ -0.78
ATG4B-215ENST00000468018 DAZAP1Q96EP5 407 aaKnown RBP10.19□□□□□ -0.78
ATG4B-215ENST00000468018 TRBV7-3A0A075B6L6 115 aa10.18□□□□□ -0.78
ATG4B-215ENST00000468018 C16orf90A8MZG2 172 aa10.18□□□□□ -0.78
ATG4B-215ENST00000468018 LAGE3Q14657 143 aa10.18□□□□□ -0.78
ATG4B-215ENST00000468018 NEXN-AS1Q8NBZ9 246 aa10.18□□□□□ -0.78
ATG4B-215ENST00000468018 NUDT10Q8NFP7 164 aa10.18□□□□□ -0.78
ATG4B-215ENST00000468018 NUDT11Q96G61 164 aa10.18□□□□□ -0.78
ATG4B-215ENST00000468018 CACNG7P62955 275 aa10.17□□□□□ -0.78
ATG4B-215ENST00000468018 RPL36AP83881 106 aaKnown RBP10.17□□□□□ -0.78
ATG4B-215ENST00000468018 Q8N3U1 123 aa10.17□□□□□ -0.78
ATG4B-215ENST00000468018 RPL36ALQ969Q0 106 aaKnown RBP10.17□□□□□ -0.78
ATG4B-215ENST00000468018 FAM210AQ96ND0 272 aa10.17□□□□□ -0.78
ATG4B-215ENST00000468018 AP1S3Q96PC3 154 aa10.17□□□□□ -0.78
ATG4B-215ENST00000468018 CNFNQ9BYD5 112 aa10.17□□□□□ -0.78
ATG4B-215ENST00000468018 XKRY2A2RUG3 117 aa10.16□□□□□ -0.78
ATG4B-215ENST00000468018 F2Z2F3 143 aa10.16□□□□□ -0.78
ATG4B-215ENST00000468018 IGHV3-30P01768 117 aa10.16□□□□□ -0.78
ATG4B-215ENST00000468018 IGHV3-33P01772 117 aa10.16□□□□□ -0.78
ATG4B-215ENST00000468018 IGHV3-30-3P0DP02 117 aa10.16□□□□□ -0.78
ATG4B-215ENST00000468018 IGHV3-30-5P0DP03 117 aa10.16□□□□□ -0.78
ATG4B-215ENST00000468018 CTRLP40313 264 aa10.16□□□□□ -0.78
ATG4B-215ENST00000468018 ZNF56Q15929 161 aa10.16□□□□□ -0.78
ATG4B-215ENST00000468018 A0A087WTM6 91 aa10.15□□□□□ -0.78
ATG4B-215ENST00000468018 ERVFC1-1P60608 527 aa10.15□□□□□ -0.78
ATG4B-215ENST00000468018 TOR2AQ5JU69 321 aa10.15□□□□□ -0.78
ATG4B-215ENST00000468018 WDR73Q6P4I2 378 aa10.15□□□□□ -0.78
ATG4B-215ENST00000468018 FAM231DQ6ZW35 169 aa10.15□□□□□ -0.78
ATG4B-215ENST00000468018 RNASE7Q9H1E1 156 aaKnown RBP10.15□□□□□ -0.78
ATG4B-215ENST00000468018 RPP21Q9H633 154 aaKnown RBP10.15□□□□□ -0.78
ATG4B-215ENST00000468018 CDK2AP2O75956 126 aa10.14□□□□□ -0.79
ATG4B-215ENST00000468018 LYZL1Q6UWQ5 148 aa10.14□□□□□ -0.79
ATG4B-215ENST00000468018 NIT1Q86X76 327 aa10.14□□□□□ -0.79
ATG4B-215ENST00000468018 LRCOL1A6NCL2 159 aa10.13□□□□□ -0.79
ATG4B-215ENST00000468018 CHCHD7Q9BUK0 85 aa10.13□□□□□ -0.79
ATG4B-215ENST00000468018 TPPP3Q9BW30 176 aa10.13□□□□□ -0.79
ATG4B-215ENST00000468018 M0QY20 66 aa10.12□□□□□ -0.79
ATG4B-215ENST00000468018 SRP19P09132 144 aaKnown RBP10.12□□□□□ -0.79
ATG4B-215ENST00000468018 SMIM17P0DL12 118 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms