RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 EIF4EBP1Q13541 118 aaPredicted RBP2.24□□□□□ -2.05
VPS13D-203ENST00000466732 SS18Q15532 418 aa2.24□□□□□ -2.05
VPS13D-203ENST00000466732 CASC10Q5T4H9 136 aa2.24□□□□□ -2.05
VPS13D-203ENST00000466732 LINC00173Q6ZV60 143 aa2.24□□□□□ -2.05
VPS13D-203ENST00000466732 LCA10Q71F78 164 aa2.24□□□□□ -2.05
VPS13D-203ENST00000466732 ARL17AQ8IVW1 177 aa2.24□□□□□ -2.05
VPS13D-203ENST00000466732 ZNF492Q9P255 531 aa2.24□□□□□ -2.05
VPS13D-203ENST00000466732 THSD7AQ9UPZ6 1657 aa2.24□□□□□ -2.05
VPS13D-203ENST00000466732 BPTFQ12830 3046 aa2.23□□□□□ -2.05
VPS13D-203ENST00000466732 A0A0G2JRQ6 117 aa2.23□□□□□ -2.05
VPS13D-203ENST00000466732 TRBV10-2A0A0K0K1G8 114 aa2.23□□□□□ -2.05
VPS13D-203ENST00000466732 A0A1B0GWA3 101 aa2.23□□□□□ -2.05
VPS13D-203ENST00000466732 LRCOL1A6NCL2 159 aa2.23□□□□□ -2.05
VPS13D-203ENST00000466732 C17orf51A8MQB3 221 aa2.23□□□□□ -2.05
VPS13D-203ENST00000466732 RNASE2P10153 161 aaKnown RBP2.23□□□□□ -2.05
VPS13D-203ENST00000466732 CD70P32970 193 aa2.23□□□□□ -2.05
VPS13D-203ENST00000466732 UBE2D1P51668 147 aa2.23□□□□□ -2.05
VPS13D-203ENST00000466732 CCL23P55773 120 aa2.23□□□□□ -2.05
VPS13D-203ENST00000466732 CACNG7P62955 275 aa2.23□□□□□ -2.05
VPS13D-203ENST00000466732 HBBP68871 147 aa2.23□□□□□ -2.05
VPS13D-203ENST00000466732 SDIM1Q6ZPB5 146 aa2.23□□□□□ -2.05
VPS13D-203ENST00000466732 PHF5AQ7RTV0 110 aaKnown RBP2.23□□□□□ -2.05
VPS13D-203ENST00000466732 Q8N2B8 174 aa2.23□□□□□ -2.05
VPS13D-203ENST00000466732 Q8N8P6 123 aa2.23□□□□□ -2.05
VPS13D-203ENST00000466732 TMEM75Q8N9X5 138 aa2.23□□□□□ -2.05
VPS13D-203ENST00000466732 TOMM6Q96B49 74 aa2.23□□□□□ -2.05
VPS13D-203ENST00000466732 FXYD5Q96DB9 178 aa2.23□□□□□ -2.05
VPS13D-203ENST00000466732 RNF185Q96GF1 192 aa2.23□□□□□ -2.05
VPS13D-203ENST00000466732 HIST1H4GQ99525 98 aa2.23□□□□□ -2.05
VPS13D-203ENST00000466732 LINC00597Q9H2U6 94 aa2.23□□□□□ -2.05
VPS13D-203ENST00000466732 DYNLRB1Q9NP97 96 aa2.23□□□□□ -2.05
VPS13D-203ENST00000466732 COL5A1P20908 1838 aaPredicted RBP2.23□□□□□ -2.05
VPS13D-203ENST00000466732 TRBV20OR9-2A0A075B6H5 130 aa2.22□□□□□ -2.05
VPS13D-203ENST00000466732 IGLV4-69A0A075B6H9 119 aa2.22□□□□□ -2.05
VPS13D-203ENST00000466732 A0A0B4J2C4 111 aa2.22□□□□□ -2.05
VPS13D-203ENST00000466732 PIGBOS1A0A0B4J2F0 54 aa2.22□□□□□ -2.05
VPS13D-203ENST00000466732 A0A1W2PQD3 144 aa2.22□□□□□ -2.05
VPS13D-203ENST00000466732 LINC01549A6NIU2 74 aa2.22□□□□□ -2.05
VPS13D-203ENST00000466732 A8MUN3 132 aa2.22□□□□□ -2.05
VPS13D-203ENST00000466732 IBA57-AS1B1ANH7 110 aa2.22□□□□□ -2.05
VPS13D-203ENST00000466732 TMEM256-PLSCR3K7ERE1 68 aa2.22□□□□□ -2.05
VPS13D-203ENST00000466732 M0R381 172 aa2.22□□□□□ -2.05
VPS13D-203ENST00000466732 LST1O00453 97 aa2.22□□□□□ -2.05
VPS13D-203ENST00000466732 PEX7O00628 323 aa2.22□□□□□ -2.05
VPS13D-203ENST00000466732 NDUFC1O43677 76 aa2.22□□□□□ -2.05
VPS13D-203ENST00000466732 BCE1O60756 84 aa2.22□□□□□ -2.05
VPS13D-203ENST00000466732 CCKP06307 115 aa2.22□□□□□ -2.05
VPS13D-203ENST00000466732 ZNF80P51504 273 aaPredicted RBP2.22□□□□□ -2.05
VPS13D-203ENST00000466732 ATXN8Q156A1 80 aa2.22□□□□□ -2.05
VPS13D-203ENST00000466732 C1orf100Q5SVJ3 147 aa2.22□□□□□ -2.05
VPS13D-203ENST00000466732 CLEC19AQ6UXS0 136 aa2.22□□□□□ -2.05
VPS13D-203ENST00000466732 NDUFA11Q86Y39 141 aa2.22□□□□□ -2.05
VPS13D-203ENST00000466732 CLECL1Q8IZS7 167 aa2.22□□□□□ -2.05
VPS13D-203ENST00000466732 RPRMLQ8N4K4 120 aa2.22□□□□□ -2.05
VPS13D-203ENST00000466732 TIMM17AQ99595 171 aa2.22□□□□□ -2.05
VPS13D-203ENST00000466732 SLC50A1Q9BRV3 221 aa2.22□□□□□ -2.05
VPS13D-203ENST00000466732 SLC25A22Q9H936 323 aa2.22□□□□□ -2.05
VPS13D-203ENST00000466732 TAS2R4Q9NYW5 299 aa2.22□□□□□ -2.05
VPS13D-203ENST00000466732 LINC00588Q9Y4M8 146 aa2.22□□□□□ -2.05
VPS13D-203ENST00000466732 SPTBP11277 2137 aa2.21□□□□□ -2.06
VPS13D-203ENST00000466732 MDC1Q14676 2089 aaKnown RBP2.21□□□□□ -2.06
VPS13D-203ENST00000466732 TRAV8-3A0A0A6YYJ7 113 aa2.21□□□□□ -2.06
VPS13D-203ENST00000466732 TRBV7-1A0A0A6YYK4 115 aa2.21□□□□□ -2.06
VPS13D-203ENST00000466732 IGHV3-64DA0A0J9YX35 117 aa2.21□□□□□ -2.06
VPS13D-203ENST00000466732 C4orf51C9J302 202 aa2.21□□□□□ -2.06
VPS13D-203ENST00000466732 KRTAP4-16G5E9R7 235 aaPredicted RBP2.21□□□□□ -2.06
VPS13D-203ENST00000466732 IFI6P09912 130 aa2.21□□□□□ -2.06
VPS13D-203ENST00000466732 CKS2P33552 79 aa2.21□□□□□ -2.06
VPS13D-203ENST00000466732 NCBP2P52298 156 aaKnown RBP eCLIP2.21□□□□□ -2.06
VPS13D-203ENST00000466732 MP68P56378 58 aa2.21□□□□□ -2.06
VPS13D-203ENST00000466732 UBE2BP63146 152 aa2.21□□□□□ -2.06
VPS13D-203ENST00000466732 RBM3P98179 157 aaKnown RBP2.21□□□□□ -2.06
VPS13D-203ENST00000466732 SLC48A1Q6P1K1 146 aa2.21□□□□□ -2.06
VPS13D-203ENST00000466732 FAM19A3Q7Z5A8 133 aa2.21□□□□□ -2.06
VPS13D-203ENST00000466732 MDP1Q86V88 176 aa2.21□□□□□ -2.06
VPS13D-203ENST00000466732 NKAPP1Q8N9T2 125 aa2.21□□□□□ -2.06
VPS13D-203ENST00000466732 CHCHD10Q8WYQ3 142 aaPredicted RBP2.21□□□□□ -2.06
VPS13D-203ENST00000466732 RNASE6Q93091 150 aaKnown RBP2.21□□□□□ -2.06
VPS13D-203ENST00000466732 SPTSSAQ969W0 71 aa2.21□□□□□ -2.06
VPS13D-203ENST00000466732 CCL13Q99616 98 aa2.21□□□□□ -2.06
VPS13D-203ENST00000466732 PLXNB1O43157 2135 aa2.21□□□□□ -2.06
VPS13D-203ENST00000466732 TET1Q8NFU7 2136 aa2.21□□□□□ -2.06
VPS13D-203ENST00000466732 A0A096LNJ9 63 aa2.2□□□□□ -2.06
VPS13D-203ENST00000466732 IGLV1-36A0A0B4J1U3 117 aa2.2□□□□□ -2.06
VPS13D-203ENST00000466732 IGKV1D-43A0A0B4J1Z2 117 aa2.2□□□□□ -2.06
VPS13D-203ENST00000466732 TRAV3A0A0B4J244 114 aa2.2□□□□□ -2.06
VPS13D-203ENST00000466732 TEX49A0A1B0GTD5 131 aa2.2□□□□□ -2.06
VPS13D-203ENST00000466732 RBMY1BA6NDE4 496 aaKnown RBP2.2□□□□□ -2.06
VPS13D-203ENST00000466732 RBMY1EA6NEQ0 496 aaKnown RBP2.2□□□□□ -2.06
VPS13D-203ENST00000466732 IQCF6A8MYZ5 107 aa2.2□□□□□ -2.06
VPS13D-203ENST00000466732 H7BZZ5 65 aa2.2□□□□□ -2.06
VPS13D-203ENST00000466732 COX7A2LO14548 114 aa2.2□□□□□ -2.06
VPS13D-203ENST00000466732 SPINK4O60575 86 aa2.2□□□□□ -2.06
VPS13D-203ENST00000466732 LTAP01374 205 aa2.2□□□□□ -2.06
VPS13D-203ENST00000466732 RBMY1DP0C7P1 496 aaKnown RBP2.2□□□□□ -2.06
VPS13D-203ENST00000466732 RBMY1A1P0DJD3 496 aaKnown RBP2.2□□□□□ -2.06
VPS13D-203ENST00000466732 RBMY1CP0DJD4 496 aa2.2□□□□□ -2.06
VPS13D-203ENST00000466732 INAFM2P0DMQ5 153 aa2.2□□□□□ -2.06
VPS13D-203ENST00000466732 FCER1GP30273 86 aa2.2□□□□□ -2.06
VPS13D-203ENST00000466732 IFI27P40305 119 aaPredicted RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms