RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 GAGE5Q13069 117 aa8.3□□□□□ -1.08
SHROOM3-202ENST00000466541 RHOHQ15669 191 aa8.3□□□□□ -1.08
SHROOM3-202ENST00000466541 GAGE13Q4V321 117 aa8.3□□□□□ -1.08
SHROOM3-202ENST00000466541 PIK3CD-AS1Q5SR53 167 aa8.3□□□□□ -1.08
SHROOM3-202ENST00000466541 LYZL1Q6UWQ5 148 aa8.3□□□□□ -1.08
SHROOM3-202ENST00000466541 ZFP2Q6ZN57 461 aa8.3□□□□□ -1.08
SHROOM3-202ENST00000466541 MRPS16Q9Y3D3 137 aaKnown RBP8.3□□□□□ -1.08
SHROOM3-202ENST00000466541 TRBV6-4A0A1B0GX49 114 aa8.29□□□□□ -1.08
SHROOM3-202ENST00000466541 F5H697 171 aa8.29□□□□□ -1.08
SHROOM3-202ENST00000466541 RHODO00212 210 aa8.29□□□□□ -1.08
SHROOM3-202ENST00000466541 CIDEAO60543 219 aa8.29□□□□□ -1.08
SHROOM3-202ENST00000466541 NXPH4O95158 308 aa8.29□□□□□ -1.08
SHROOM3-202ENST00000466541 SMIM17P0DL12 118 aa8.29□□□□□ -1.08
SHROOM3-202ENST00000466541 ZNF56Q15929 161 aa8.29□□□□□ -1.08
SHROOM3-202ENST00000466541 SSBP4Q9BWG4 385 aaPredicted RBP8.29□□□□□ -1.08
SHROOM3-202ENST00000466541 MSRB1Q9NZV6 116 aa8.29□□□□□ -1.08
SHROOM3-202ENST00000466541 Q9UF83 564 aa8.29□□□□□ -1.08
SHROOM3-202ENST00000466541 CRYGDP07320 174 aa8.28□□□□□ -1.08
SHROOM3-202ENST00000466541 IGLC6P0CF74 106 aa8.28□□□□□ -1.08
SHROOM3-202ENST00000466541 TMEM241Q24JQ0 296 aa8.28□□□□□ -1.08
SHROOM3-202ENST00000466541 UFSP1Q6NVU6 142 aa8.28□□□□□ -1.08
SHROOM3-202ENST00000466541 LINC01551Q86U37 167 aa8.28□□□□□ -1.08
SHROOM3-202ENST00000466541 NBDYA0A0U1RRE5 68 aa8.27□□□□□ -1.09
SHROOM3-202ENST00000466541 MGPP08493 103 aa8.27□□□□□ -1.09
SHROOM3-202ENST00000466541 ADIRFQ15847 76 aa8.27□□□□□ -1.09
SHROOM3-202ENST00000466541 ATP6V0E2Q8NHE4 81 aa8.27□□□□□ -1.09
SHROOM3-202ENST00000466541 LY96Q9Y6Y9 160 aa8.27□□□□□ -1.09
SHROOM3-202ENST00000466541 A0A1W2PPQ1 181 aa8.26□□□□□ -1.09
SHROOM3-202ENST00000466541 F2Z2F3 143 aa8.26□□□□□ -1.09
SHROOM3-202ENST00000466541 SIVA1O15304 175 aa8.26□□□□□ -1.09
SHROOM3-202ENST00000466541 NDUFS6O75380 124 aaKnown RBP8.26□□□□□ -1.09
SHROOM3-202ENST00000466541 CACNG7P62955 275 aa8.26□□□□□ -1.09
SHROOM3-202ENST00000466541 TWIST1Q15672 202 aa8.26□□□□□ -1.09
SHROOM3-202ENST00000466541 SOHLH1Q5JUK2 328 aa8.26□□□□□ -1.09
SHROOM3-202ENST00000466541 Q6ZR54 194 aa8.26□□□□□ -1.09
SHROOM3-202ENST00000466541 SH2D6Q7Z4S9 175 aa8.26□□□□□ -1.09
SHROOM3-202ENST00000466541 PGLYRP4Q96LB8 373 aa8.26□□□□□ -1.09
SHROOM3-202ENST00000466541 AP1S3Q96PC3 154 aa8.26□□□□□ -1.09
SHROOM3-202ENST00000466541 DNAH6Q9C0G6 4158 aa8.26□□□□□ -1.09
SHROOM3-202ENST00000466541 A8MWL6 223 aa8.25□□□□□ -1.09
SHROOM3-202ENST00000466541 NTF3P20783 257 aa8.25□□□□□ -1.09
SHROOM3-202ENST00000466541 RAB4BP61018 213 aa8.25□□□□□ -1.09
SHROOM3-202ENST00000466541 IFITM2Q01629 132 aa8.25□□□□□ -1.09
SHROOM3-202ENST00000466541 FAM74A3Q4VXF1 159 aa8.25□□□□□ -1.09
SHROOM3-202ENST00000466541 OR10J3Q5JRS4 329 aa8.25□□□□□ -1.09
SHROOM3-202ENST00000466541 C1orf134Q5TEV5 83 aa8.25□□□□□ -1.09
SHROOM3-202ENST00000466541 FAM231DQ6ZW35 169 aa8.25□□□□□ -1.09
SHROOM3-202ENST00000466541 C15orf54Q8N8G6 183 aa8.25□□□□□ -1.09
SHROOM3-202ENST00000466541 GTSF1Q8WW33 167 aa8.25□□□□□ -1.09
SHROOM3-202ENST00000466541 UPK3BQ9BT76 320 aa8.25□□□□□ -1.09
SHROOM3-202ENST00000466541 NAT8Q9UHE5 227 aa8.25□□□□□ -1.09
SHROOM3-202ENST00000466541 RPL23P62829 140 aaKnown RBP8.24□□□□□ -1.09
SHROOM3-202ENST00000466541 WFDC10BQ8IUB3 73 aa8.24□□□□□ -1.09
SHROOM3-202ENST00000466541 GTSF1LQ9H1H1 148 aa8.24□□□□□ -1.09
SHROOM3-202ENST00000466541 SMDT1Q9H4I9 107 aa8.24□□□□□ -1.09
SHROOM3-202ENST00000466541 TRAV8-6A0A0B4J262 113 aa8.23□□□□□ -1.09
SHROOM3-202ENST00000466541 TRGC1P0CF51 173 aa8.23□□□□□ -1.09
SHROOM3-202ENST00000466541 EVI2AP22794 236 aa8.23□□□□□ -1.09
SHROOM3-202ENST00000466541 CTRLP40313 264 aa8.23□□□□□ -1.09
SHROOM3-202ENST00000466541 RPL36AP83881 106 aaKnown RBP8.23□□□□□ -1.09
SHROOM3-202ENST00000466541 RPL36ALQ969Q0 106 aaKnown RBP8.23□□□□□ -1.09
SHROOM3-202ENST00000466541 ISOC2Q96AB3 205 aa8.23□□□□□ -1.09
SHROOM3-202ENST00000466541 KRTAP1-5Q9BYS1 174 aa8.23□□□□□ -1.09
SHROOM3-202ENST00000466541 OSTCQ9NRP0 149 aa8.23□□□□□ -1.09
SHROOM3-202ENST00000466541 IGHV3-38A0A0C4DH36 116 aa8.22□□□□□ -1.09
SHROOM3-202ENST00000466541 RTL8CO15255 209 aa8.22□□□□□ -1.09
SHROOM3-202ENST00000466541 TTC32Q5I0X7 151 aa8.22□□□□□ -1.09
SHROOM3-202ENST00000466541 CLLU1Q5K131 121 aa8.22□□□□□ -1.09
SHROOM3-202ENST00000466541 OR10G8Q8NGN5 311 aa8.22□□□□□ -1.09
SHROOM3-202ENST00000466541 BORCS7Q96B45 105 aa8.22□□□□□ -1.09
SHROOM3-202ENST00000466541 KIF25-AS1Q9Y6Z4 181 aa8.22□□□□□ -1.09
SHROOM3-202ENST00000466541 DNAH10Q8IVF4 4471 aa8.22□□□□□ -1.09
SHROOM3-202ENST00000466541 FRAS1Q86XX4 4008 aa8.21□□□□□ -1.09
SHROOM3-202ENST00000466541 TRBV7-3A0A075B6L6 115 aa8.21□□□□□ -1.1
SHROOM3-202ENST00000466541 PRSS29PA6NIE9 313 aa8.21□□□□□ -1.1
SHROOM3-202ENST00000466541 IGHV3-30P01768 117 aa8.21□□□□□ -1.1
SHROOM3-202ENST00000466541 IGHV3-33P01772 117 aa8.21□□□□□ -1.1
SHROOM3-202ENST00000466541 IGHV3-30-3P0DP02 117 aa8.21□□□□□ -1.1
SHROOM3-202ENST00000466541 IGHV3-30-5P0DP03 117 aa8.21□□□□□ -1.1
SHROOM3-202ENST00000466541 FOXA3P55318 350 aaPredicted RBP8.21□□□□□ -1.1
SHROOM3-202ENST00000466541 SUMO4Q6EEV6 95 aa8.21□□□□□ -1.1
SHROOM3-202ENST00000466541 C6orf223Q8N319 242 aa8.21□□□□□ -1.1
SHROOM3-202ENST00000466541 NEXN-AS1Q8NBZ9 246 aa8.21□□□□□ -1.1
SHROOM3-202ENST00000466541 TSKUQ8WUA8 353 aa8.21□□□□□ -1.1
SHROOM3-202ENST00000466541 DPH3P1Q9H4G8 78 aa8.21□□□□□ -1.1
SHROOM3-202ENST00000466541 EPPK1P58107 5090 aaKnown RBP8.2□□□□□ -1.1
SHROOM3-202ENST00000466541 TRAV9-2A0A087WT02 112 aa8.2□□□□□ -1.1
SHROOM3-202ENST00000466541 TRBV10-1A0A0K0K1A3 114 aa8.2□□□□□ -1.1
SHROOM3-202ENST00000466541 HIGD1CA8MV81 97 aa8.2□□□□□ -1.1
SHROOM3-202ENST00000466541 LINC00694P0DN24 101 aa8.2□□□□□ -1.1
SHROOM3-202ENST00000466541 TIRAPP58753 221 aa8.2□□□□□ -1.1
SHROOM3-202ENST00000466541 LINC00315P59091 139 aa8.2□□□□□ -1.1
SHROOM3-202ENST00000466541 CT83Q5H943 113 aa8.2□□□□□ -1.1
SHROOM3-202ENST00000466541 LELP1Q5T871 98 aa8.2□□□□□ -1.1
SHROOM3-202ENST00000466541 WDR73Q6P4I2 378 aa8.2□□□□□ -1.1
SHROOM3-202ENST00000466541 SMIM15Q7Z3B0 74 aa8.2□□□□□ -1.1
SHROOM3-202ENST00000466541 TNFRSF18Q9Y5U5 241 aa8.2□□□□□ -1.1
SHROOM3-202ENST00000466541 V9GYV3 84 aa8.2□□□□□ -1.1
SHROOM3-202ENST00000466541 DNAH2Q9P225 4427 aa8.19□□□□□ -1.1
SHROOM3-202ENST00000466541 UBE2D3P61077 147 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms