RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 P01737 135 aa3.47□□□□□ -1.85
NCL-208ENST00000466274 TYMSP04818 313 aa3.47□□□□□ -1.85
NCL-208ENST00000466274 LSM3P62310 102 aaKnown RBP3.47□□□□□ -1.85
NCL-208ENST00000466274 TPRXLQ17RH7 258 aa3.47□□□□□ -1.85
NCL-208ENST00000466274 C1orf137Q5JT78 98 aa3.47□□□□□ -1.85
NCL-208ENST00000466274 EXOC3-AS1Q8N2X6 119 aa3.47□□□□□ -1.85
NCL-208ENST00000466274 ASB13Q8WXK3 278 aa3.47□□□□□ -1.85
NCL-208ENST00000466274 PFDN5Q99471 154 aa3.47□□□□□ -1.85
NCL-208ENST00000466274 SAMD10Q9BYL1 202 aa3.47□□□□□ -1.85
NCL-208ENST00000466274 PRR34Q9NV39 138 aa3.47□□□□□ -1.85
NCL-208ENST00000466274 COMMD3Q9UBI1 195 aa3.47□□□□□ -1.85
NCL-208ENST00000466274 MTFP1Q9UDX5 166 aa3.47□□□□□ -1.85
NCL-208ENST00000466274 GPR132Q9UNW8 380 aa3.47□□□□□ -1.85
NCL-208ENST00000466274 CARHSP1Q9Y2V2 147 aaKnown RBP3.47□□□□□ -1.85
NCL-208ENST00000466274 DUXBA0A1W2PPF3 345 aa3.46□□□□□ -1.86
NCL-208ENST00000466274 H0Y9J4 135 aa3.46□□□□□ -1.86
NCL-208ENST00000466274 H3BP45 60 aa3.46□□□□□ -1.86
NCL-208ENST00000466274 APOA1P02647 267 aa3.46□□□□□ -1.86
NCL-208ENST00000466274 SLC25A6P12236 298 aa3.46□□□□□ -1.86
NCL-208ENST00000466274 NCS1P62166 190 aa3.46□□□□□ -1.86
NCL-208ENST00000466274 SLC38A11Q08AI6 406 aa3.46□□□□□ -1.86
NCL-208ENST00000466274 NEDD8Q15843 81 aa3.46□□□□□ -1.86
NCL-208ENST00000466274 MPV17L2Q567V2 206 aa3.46□□□□□ -1.86
NCL-208ENST00000466274 LINC00269Q8N2A0 174 aa3.46□□□□□ -1.86
NCL-208ENST00000466274 SUN5Q8TC36 379 aa3.46□□□□□ -1.86
NCL-208ENST00000466274 DYNC2LI1Q8TCX1 351 aa3.46□□□□□ -1.86
NCL-208ENST00000466274 C9orf85Q96MD7 179 aa3.46□□□□□ -1.86
NCL-208ENST00000466274 SCGB3A2Q96PL1 93 aa3.46□□□□□ -1.86
NCL-208ENST00000466274 CHCHD5Q9BSY4 110 aa3.46□□□□□ -1.86
NCL-208ENST00000466274 TMEM14CQ9P0S9 112 aa3.46□□□□□ -1.86
NCL-208ENST00000466274 RABL2AQ9UBK7 228 aaPredicted RBP3.46□□□□□ -1.86
NCL-208ENST00000466274 BLOC1S6Q9UL45 172 aa3.46□□□□□ -1.86
NCL-208ENST00000466274 RABL2BQ9UNT1 228 aa3.46□□□□□ -1.86
NCL-208ENST00000466274 A0A096LNI7 61 aa3.45□□□□□ -1.86
NCL-208ENST00000466274 TRBV6-8A0A0A6YYG3 113 aa3.45□□□□□ -1.86
NCL-208ENST00000466274 TRBV10-1A0A0K0K1A3 114 aa3.45□□□□□ -1.86
NCL-208ENST00000466274 RAB3DO95716 219 aa3.45□□□□□ -1.86
NCL-208ENST00000466274 TAS2R19P59542 299 aa3.45□□□□□ -1.86
NCL-208ENST00000466274 S100A10P60903 97 aa3.45□□□□□ -1.86
NCL-208ENST00000466274 RRAS2P62070 204 aaPredicted RBP3.45□□□□□ -1.86
NCL-208ENST00000466274 EIF5AP63241 154 aaKnown RBP3.45□□□□□ -1.86
NCL-208ENST00000466274 LGALSLQ3ZCW2 172 aaPredicted RBP3.45□□□□□ -1.86
NCL-208ENST00000466274 ZNF506Q5JVG8 444 aa3.45□□□□□ -1.86
NCL-208ENST00000466274 KRTAP26-1Q6PEX3 210 aa3.45□□□□□ -1.86
NCL-208ENST00000466274 TMEM229BQ8NBD8 167 aa3.45□□□□□ -1.86
NCL-208ENST00000466274 PARLQ9H300 379 aa3.45□□□□□ -1.86
NCL-208ENST00000466274 CCDC59Q9P031 241 aaKnown RBP3.45□□□□□ -1.86
NCL-208ENST00000466274 DISC1C4P0D8 188 aa3.44□□□□□ -1.86
NCL-208ENST00000466274 IGLV7-43P04211 117 aa3.44□□□□□ -1.86
NCL-208ENST00000466274 CAMPP49913 170 aa3.44□□□□□ -1.86
NCL-208ENST00000466274 RAB2AP61019 212 aa3.44□□□□□ -1.86
NCL-208ENST00000466274 TMEM97Q5BJF2 176 aa3.44□□□□□ -1.86
NCL-208ENST00000466274 CLPSL2Q6UWE3 100 aa3.44□□□□□ -1.86
NCL-208ENST00000466274 C14orf178Q8N769 122 aaPredicted RBP3.44□□□□□ -1.86
NCL-208ENST00000466274 LITAFQ99732 161 aa3.44□□□□□ -1.86
NCL-208ENST00000466274 SOSTQ9BQB4 213 aa3.44□□□□□ -1.86
NCL-208ENST00000466274 GGACTQ9BVM4 153 aa3.44□□□□□ -1.86
NCL-208ENST00000466274 PSENENQ9NZ42 101 aa3.44□□□□□ -1.86
NCL-208ENST00000466274 Q9UF83 564 aa3.44□□□□□ -1.86
NCL-208ENST00000466274 IGLV7-46A0A075B6I9 117 aa3.43□□□□□ -1.86
NCL-208ENST00000466274 TRBV7-3A0A075B6L6 115 aa3.43□□□□□ -1.86
NCL-208ENST00000466274 PTTG1O95997 202 aa3.43□□□□□ -1.86
NCL-208ENST00000466274 CAV2P51636 162 aa3.43□□□□□ -1.86
NCL-208ENST00000466274 VBP1P61758 197 aa3.43□□□□□ -1.86
NCL-208ENST00000466274 RBX1P62877 108 aa3.43□□□□□ -1.86
NCL-208ENST00000466274 REG3AQ06141 175 aa3.43□□□□□ -1.86
NCL-208ENST00000466274 GAGE6Q13070 117 aa3.43□□□□□ -1.86
NCL-208ENST00000466274 ZNF674Q2M3X9 581 aa3.43□□□□□ -1.86
NCL-208ENST00000466274 TSKUQ8WUA8 353 aa3.43□□□□□ -1.86
NCL-208ENST00000466274 C15orf40Q8WUR7 153 aa3.43□□□□□ -1.86
NCL-208ENST00000466274 NAA50Q9GZZ1 169 aaKnown RBP3.43□□□□□ -1.86
NCL-208ENST00000466274 MUC17Q685J3 4493 aa3.43□□□□□ -1.86
NCL-208ENST00000466274 EIF3GO75821 320 aaKnown RBP eCLIP3.42□□□□□ -1.86
NCL-208ENST00000466274 NBEAP1P0C6P0 100 aa3.42□□□□□ -1.86
NCL-208ENST00000466274 S100A4P26447 101 aaKnown RBP3.42□□□□□ -1.86
NCL-208ENST00000466274 CAMLGP49069 296 aa3.42□□□□□ -1.86
NCL-208ENST00000466274 UBE2D3P61077 147 aa3.42□□□□□ -1.86
NCL-208ENST00000466274 UBE2D2P62837 147 aa3.42□□□□□ -1.86
NCL-208ENST00000466274 CYCSP99999 105 aaKnown RBP3.42□□□□□ -1.86
NCL-208ENST00000466274 ASB16-AS1Q495Z4 193 aa3.42□□□□□ -1.86
NCL-208ENST00000466274 MZT2BQ6NZ67 158 aa3.42□□□□□ -1.86
NCL-208ENST00000466274 LINC00337Q8N6G1 96 aa3.42□□□□□ -1.86
NCL-208ENST00000466274 MGST2Q99735 147 aa3.42□□□□□ -1.86
NCL-208ENST00000466274 PRRT1Q99946 306 aa3.42□□□□□ -1.86
NCL-208ENST00000466274 LYRM2Q9NU23 88 aaPredicted RBP3.42□□□□□ -1.86
NCL-208ENST00000466274 EXTL2Q9UBQ6 330 aa3.42□□□□□ -1.86
NCL-208ENST00000466274 RAB26Q9ULW5 256 aa3.42□□□□□ -1.86
NCL-208ENST00000466274 KRTAP1-4P0C5Y4 121 aa3.41□□□□□ -1.86
NCL-208ENST00000466274 METTL15P1P0C7V9 234 aa3.41□□□□□ -1.86
NCL-208ENST00000466274 PYYP10082 97 aa3.41□□□□□ -1.86
NCL-208ENST00000466274 RAB5CP51148 216 aa3.41□□□□□ -1.86
NCL-208ENST00000466274 HIGD2BQ4VC39 106 aa3.41□□□□□ -1.86
NCL-208ENST00000466274 UFSP1Q6NVU6 142 aa3.41□□□□□ -1.86
NCL-208ENST00000466274 TMEM14EPQ6UXP3 125 aa3.41□□□□□ -1.86
NCL-208ENST00000466274 SMIM4Q8WVI0 70 aa3.41□□□□□ -1.86
NCL-208ENST00000466274 SMIM8Q96KF7 97 aa3.41□□□□□ -1.86
NCL-208ENST00000466274 NDFIP1Q9BT67 221 aa3.41□□□□□ -1.86
NCL-208ENST00000466274 NMES1Q9C002 83 aa3.41□□□□□ -1.86
NCL-208ENST00000466274 TREM1Q9NP99 234 aa3.41□□□□□ -1.86
NCL-208ENST00000466274 SCP2D1Q9UJQ7 156 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms