RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 F2Z2F3 143 aa10.03□□□□□ -0.8
SQSTM1-205ENST00000464493 CRYGDP07320 174 aa10.03□□□□□ -0.8
SQSTM1-205ENST00000464493 ERVFC1-1P60608 527 aa10.03□□□□□ -0.8
SQSTM1-205ENST00000464493 SSTP61278 116 aa10.03□□□□□ -0.8
SQSTM1-205ENST00000464493 IFITM2Q01629 132 aa10.03□□□□□ -0.8
SQSTM1-205ENST00000464493 RHOHQ15669 191 aa10.03□□□□□ -0.8
SQSTM1-205ENST00000464493 FAM74A4Q5TZK3 123 aa10.03□□□□□ -0.8
SQSTM1-205ENST00000464493 Q6ZSN1 163 aa10.03□□□□□ -0.8
SQSTM1-205ENST00000464493 FAM231DQ6ZW35 169 aa10.03□□□□□ -0.8
SQSTM1-205ENST00000464493 A0A1W2PPQ1 181 aa10.02□□□□□ -0.81
SQSTM1-205ENST00000464493 GATCO43716 136 aaKnown RBP10.02□□□□□ -0.81
SQSTM1-205ENST00000464493 TMEM241Q24JQ0 296 aa10.02□□□□□ -0.81
SQSTM1-205ENST00000464493 LYPD5Q6UWN5 251 aa10.02□□□□□ -0.81
SQSTM1-205ENST00000464493 ZNRF2Q8NHG8 242 aa10.02□□□□□ -0.81
SQSTM1-205ENST00000464493 DNAH6Q9C0G6 4158 aa10.02□□□□□ -0.81
SQSTM1-205ENST00000464493 IGLV2-18A0A075B6J9 118 aa10.01□□□□□ -0.81
SQSTM1-205ENST00000464493 CACNG7P62955 275 aa10.01□□□□□ -0.81
SQSTM1-205ENST00000464493 CLLU1Q5K131 121 aa10.01□□□□□ -0.81
SQSTM1-205ENST00000464493 LYZL1Q6UWQ5 148 aa10.01□□□□□ -0.81
SQSTM1-205ENST00000464493 SH2D6Q7Z4S9 175 aa10.01□□□□□ -0.81
SQSTM1-205ENST00000464493 UPK3BQ9BT76 320 aa10.01□□□□□ -0.81
SQSTM1-205ENST00000464493 MRPS16Q9Y3D3 137 aaKnown RBP10.01□□□□□ -0.81
SQSTM1-205ENST00000464493 M0R2N4 97 aa10□□□□□ -0.81
SQSTM1-205ENST00000464493 SOHLH1Q5JUK2 328 aa10□□□□□ -0.81
SQSTM1-205ENST00000464493 C14orf178Q8N769 122 aaPredicted RBP10□□□□□ -0.81
SQSTM1-205ENST00000464493 Q9H8V8 135 aa10□□□□□ -0.81
SQSTM1-205ENST00000464493 NAT8Q9UHE5 227 aa10□□□□□ -0.81
SQSTM1-205ENST00000464493 A8MWL6 223 aa9.99□□□□□ -0.81
SQSTM1-205ENST00000464493 RPL23P62829 140 aaKnown RBP9.99□□□□□ -0.81
SQSTM1-205ENST00000464493 WDR73Q6P4I2 378 aa9.99□□□□□ -0.81
SQSTM1-205ENST00000464493 OSTCQ9NRP0 149 aa9.99□□□□□ -0.81
SQSTM1-205ENST00000464493 SMIM17P0DL12 118 aa9.98□□□□□ -0.81
SQSTM1-205ENST00000464493 NTF3P20783 257 aa9.98□□□□□ -0.81
SQSTM1-205ENST00000464493 CTRLP40313 264 aa9.98□□□□□ -0.81
SQSTM1-205ENST00000464493 RAB4BP61018 213 aa9.98□□□□□ -0.81
SQSTM1-205ENST00000464493 CT83Q5H943 113 aa9.98□□□□□ -0.81
SQSTM1-205ENST00000464493 GTSF1Q8WW33 167 aa9.98□□□□□ -0.81
SQSTM1-205ENST00000464493 ISOC2Q96AB3 205 aa9.98□□□□□ -0.81
SQSTM1-205ENST00000464493 AP1S3Q96PC3 154 aa9.98□□□□□ -0.81
SQSTM1-205ENST00000464493 MSRB1Q9NZV6 116 aa9.98□□□□□ -0.81
SQSTM1-205ENST00000464493 ADIRFQ15847 76 aa9.97□□□□□ -0.81
SQSTM1-205ENST00000464493 Q6ZR54 194 aa9.97□□□□□ -0.81
SQSTM1-205ENST00000464493 C15orf54Q8N8G6 183 aa9.97□□□□□ -0.81
SQSTM1-205ENST00000464493 Q9UF83 564 aa9.97□□□□□ -0.81
SQSTM1-205ENST00000464493 KIF25-AS1Q9Y6Z4 181 aa9.97□□□□□ -0.81
SQSTM1-205ENST00000464493 NBDYA0A0U1RRE5 68 aa9.96□□□□□ -0.82
SQSTM1-205ENST00000464493 GAGE12JA6NER3 117 aa9.96□□□□□ -0.82
SQSTM1-205ENST00000464493 F5H697 171 aa9.96□□□□□ -0.82
SQSTM1-205ENST00000464493 FOXA3P55318 350 aaPredicted RBP9.96□□□□□ -0.82
SQSTM1-205ENST00000464493 TIRAPP58753 221 aa9.96□□□□□ -0.82
SQSTM1-205ENST00000464493 GAGE1Q13065 139 aa9.96□□□□□ -0.82
SQSTM1-205ENST00000464493 GAGE4Q13068 117 aa9.96□□□□□ -0.82
SQSTM1-205ENST00000464493 GAGE5Q13069 117 aa9.96□□□□□ -0.82
SQSTM1-205ENST00000464493 TWIST1Q15672 202 aa9.96□□□□□ -0.82
SQSTM1-205ENST00000464493 ZNF56Q15929 161 aa9.96□□□□□ -0.82
SQSTM1-205ENST00000464493 GAGE13Q4V321 117 aa9.96□□□□□ -0.82
SQSTM1-205ENST00000464493 ATP6V0E2Q8NHE4 81 aa9.96□□□□□ -0.82
SQSTM1-205ENST00000464493 CNFNQ9BYD5 112 aa9.96□□□□□ -0.82
SQSTM1-205ENST00000464493 DNAH2Q9P225 4427 aa9.96□□□□□ -0.82
SQSTM1-205ENST00000464493 TRBV10-1A0A0K0K1A3 114 aa9.95□□□□□ -0.82
SQSTM1-205ENST00000464493 SIVA1O15304 175 aa9.95□□□□□ -0.82
SQSTM1-205ENST00000464493 TRGC1P0CF51 173 aa9.95□□□□□ -0.82
SQSTM1-205ENST00000464493 LINC00315P59091 139 aa9.95□□□□□ -0.82
SQSTM1-205ENST00000464493 TSKUQ8WUA8 353 aa9.95□□□□□ -0.82
SQSTM1-205ENST00000464493 PGLYRP4Q96LB8 373 aa9.95□□□□□ -0.82
SQSTM1-205ENST00000464493 FAM231BA6NCW3 169 aa9.94□□□□□ -0.82
SQSTM1-205ENST00000464493 LINC00694P0DN24 101 aa9.94□□□□□ -0.82
SQSTM1-205ENST00000464493 EVI2AP22794 236 aa9.94□□□□□ -0.82
SQSTM1-205ENST00000464493 OR10G8Q8NGN5 311 aa9.94□□□□□ -0.82
SQSTM1-205ENST00000464493 GFRA4Q9GZZ7 299 aa9.94□□□□□ -0.82
SQSTM1-205ENST00000464493 GTSF1LQ9H1H1 148 aa9.94□□□□□ -0.82
SQSTM1-205ENST00000464493 V9GYV3 84 aa9.94□□□□□ -0.82
SQSTM1-205ENST00000464493 DNAH10Q8IVF4 4471 aa9.94□□□□□ -0.82
SQSTM1-205ENST00000464493 HIGD1CA8MV81 97 aa9.93□□□□□ -0.82
SQSTM1-205ENST00000464493 MGPP08493 103 aa9.93□□□□□ -0.82
SQSTM1-205ENST00000464493 RPL36AP83881 106 aaKnown RBP9.93□□□□□ -0.82
SQSTM1-205ENST00000464493 RPL36ALQ969Q0 106 aaKnown RBP9.93□□□□□ -0.82
SQSTM1-205ENST00000464493 DPH3P1Q9H4G8 78 aa9.93□□□□□ -0.82
SQSTM1-205ENST00000464493 TRBV7-3A0A075B6L6 115 aa9.92□□□□□ -0.82
SQSTM1-205ENST00000464493 TTC32Q5I0X7 151 aa9.92□□□□□ -0.82
SQSTM1-205ENST00000464493 BORCS7Q96B45 105 aa9.92□□□□□ -0.82
SQSTM1-205ENST00000464493 TRAV8-6A0A0B4J262 113 aa9.91□□□□□ -0.82
SQSTM1-205ENST00000464493 OR10J3Q5JRS4 329 aa9.91□□□□□ -0.82
SQSTM1-205ENST00000464493 LELP1Q5T871 98 aa9.91□□□□□ -0.82
SQSTM1-205ENST00000464493 C1orf134Q5TEV5 83 aa9.91□□□□□ -0.82
SQSTM1-205ENST00000464493 UQCC3Q6UW78 93 aa9.91□□□□□ -0.82
SQSTM1-205ENST00000464493 SMIM15Q7Z3B0 74 aa9.91□□□□□ -0.82
SQSTM1-205ENST00000464493 WFDC10BQ8IUB3 73 aa9.91□□□□□ -0.82
SQSTM1-205ENST00000464493 NEXN-AS1Q8NBZ9 246 aa9.91□□□□□ -0.82
SQSTM1-205ENST00000464493 FRAS1Q86XX4 4008 aa9.91□□□□□ -0.82
SQSTM1-205ENST00000464493 A0A1B0GUT8 65 aa9.9□□□□□ -0.82
SQSTM1-205ENST00000464493 H7C1H1 209 aa9.9□□□□□ -0.82
SQSTM1-205ENST00000464493 UBE2D3P61077 147 aa9.9□□□□□ -0.82
SQSTM1-205ENST00000464493 UBE2D2P62837 147 aa9.9□□□□□ -0.82
SQSTM1-205ENST00000464493 SUMO4Q6EEV6 95 aa9.9□□□□□ -0.82
SQSTM1-205ENST00000464493 NAT8BQ9UHF3 227 aa9.9□□□□□ -0.82
SQSTM1-205ENST00000464493 TRAV9-2A0A087WT02 112 aa9.89□□□□□ -0.83
SQSTM1-205ENST00000464493 A0A087WWC5 75 aa9.89□□□□□ -0.83
SQSTM1-205ENST00000464493 M0QY20 66 aa9.89□□□□□ -0.83
SQSTM1-205ENST00000464493 PNRC1Q12796 327 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms