RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 RBM38Q9H0Z9 239 aaKnown RBP9.25□□□□□ -0.93
SMC1A-204ENST00000463684 EPDR1Q9UM22 224 aa9.25□□□□□ -0.93
SMC1A-204ENST00000463684 TRBV7-3A0A075B6L6 115 aa9.24□□□□□ -0.93
SMC1A-204ENST00000463684 A0A087WWL8 130 aa9.24□□□□□ -0.93
SMC1A-204ENST00000463684 TRBV6-8A0A0A6YYG3 113 aa9.24□□□□□ -0.93
SMC1A-204ENST00000463684 B4DEV8 164 aa9.24□□□□□ -0.93
SMC1A-204ENST00000463684 H3BVH4 76 aa9.24□□□□□ -0.93
SMC1A-204ENST00000463684 RAB2AP61019 212 aa9.24□□□□□ -0.93
SMC1A-204ENST00000463684 UBE2D3P61077 147 aa9.24□□□□□ -0.93
SMC1A-204ENST00000463684 UBE2D2P62837 147 aa9.24□□□□□ -0.93
SMC1A-204ENST00000463684 LCE2DQ5TA82 110 aaPredicted RBP9.24□□□□□ -0.93
SMC1A-204ENST00000463684 ARMS2P0C7Q2 107 aa9.23□□□□□ -0.93
SMC1A-204ENST00000463684 RPL12P30050 165 aaKnown RBP9.23□□□□□ -0.93
SMC1A-204ENST00000463684 PKIAP61925 76 aa9.23□□□□□ -0.93
SMC1A-204ENST00000463684 MPV17L2Q567V2 206 aa9.23□□□□□ -0.93
SMC1A-204ENST00000463684 CLRN3Q8NCR9 226 aa9.23□□□□□ -0.93
SMC1A-204ENST00000463684 SFRP2Q96HF1 295 aa9.23□□□□□ -0.93
SMC1A-204ENST00000463684 TNXBP22105 4242 aa9.23□□□□□ -0.93
SMC1A-204ENST00000463684 CDC34P49427 236 aaPredicted RBP9.22□□□□□ -0.93
SMC1A-204ENST00000463684 MZT2BQ6NZ67 158 aa9.22□□□□□ -0.93
SMC1A-204ENST00000463684 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.22□□□□□ -0.93
SMC1A-204ENST00000463684 PPP1R1CQ8WVI7 109 aa9.22□□□□□ -0.93
SMC1A-204ENST00000463684 CHCHD5Q9BSY4 110 aa9.22□□□□□ -0.93
SMC1A-204ENST00000463684 PHLDA3Q9Y5J5 127 aa9.22□□□□□ -0.93
SMC1A-204ENST00000463684 STAG3L2P0CL84 134 aa9.21□□□□□ -0.94
SMC1A-204ENST00000463684 STAG3L3P0CL85 134 aa9.21□□□□□ -0.94
SMC1A-204ENST00000463684 PET100P0DJ07 73 aa9.21□□□□□ -0.94
SMC1A-204ENST00000463684 GCHFRP30047 84 aa9.21□□□□□ -0.94
SMC1A-204ENST00000463684 CIRBPQ14011 172 aaKnown RBP9.21□□□□□ -0.94
SMC1A-204ENST00000463684 DNLZQ5SXM8 178 aa9.21□□□□□ -0.94
SMC1A-204ENST00000463684 RNF185Q96GF1 192 aa9.21□□□□□ -0.94
SMC1A-204ENST00000463684 TRAV34A0A0B4J273 112 aa9.2□□□□□ -0.94
SMC1A-204ENST00000463684 M0R381 172 aa9.2□□□□□ -0.94
SMC1A-204ENST00000463684 PTTG1O95997 202 aa9.2□□□□□ -0.94
SMC1A-204ENST00000463684 TPT1P13693 172 aaKnown RBP9.2□□□□□ -0.94
SMC1A-204ENST00000463684 SUN5Q8TC36 379 aa9.2□□□□□ -0.94
SMC1A-204ENST00000463684 C7orf33Q8WU49 177 aa9.2□□□□□ -0.94
SMC1A-204ENST00000463684 LINC01600Q96MT4 127 aa9.2□□□□□ -0.94
SMC1A-204ENST00000463684 TMEM167BQ9NRX6 74 aa9.2□□□□□ -0.94
SMC1A-204ENST00000463684 ARL2-SNX15V9GYD0 113 aa9.2□□□□□ -0.94
SMC1A-204ENST00000463684 IGHV3-64A0A075B6Q5 118 aa9.19□□□□□ -0.94
SMC1A-204ENST00000463684 A0A087WYN8 130 aa9.19□□□□□ -0.94
SMC1A-204ENST00000463684 GRIFINA4D1Z8 144 aa9.19□□□□□ -0.94
SMC1A-204ENST00000463684 KRBOX1C9JBD0 128 aa9.19□□□□□ -0.94
SMC1A-204ENST00000463684 M0R036 132 aa9.19□□□□□ -0.94
SMC1A-204ENST00000463684 MPC2O95563 127 aa9.19□□□□□ -0.94
SMC1A-204ENST00000463684 CNBPP62633 177 aaKnown RBP9.19□□□□□ -0.94
SMC1A-204ENST00000463684 OR10G8Q8NGN5 311 aa9.19□□□□□ -0.94
SMC1A-204ENST00000463684 RAB24Q969Q5 203 aa9.19□□□□□ -0.94
SMC1A-204ENST00000463684 CCDC32Q9BV29 185 aa9.19□□□□□ -0.94
SMC1A-204ENST00000463684 WFDC1Q9HC57 220 aa9.19□□□□□ -0.94
SMC1A-204ENST00000463684 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.18□□□□□ -0.94
SMC1A-204ENST00000463684 hDV102S1A0JD36 115 aa9.18□□□□□ -0.94
SMC1A-204ENST00000463684 H2BFSP57053 126 aa9.18□□□□□ -0.94
SMC1A-204ENST00000463684 CLPSL2Q6UWE3 100 aa9.18□□□□□ -0.94
SMC1A-204ENST00000463684 ZFP82Q8N141 532 aa9.18□□□□□ -0.94
SMC1A-204ENST00000463684 LINC00269Q8N2A0 174 aa9.18□□□□□ -0.94
SMC1A-204ENST00000463684 AP5S1Q9NUS5 200 aa9.18□□□□□ -0.94
SMC1A-204ENST00000463684 PRR34Q9NV39 138 aa9.18□□□□□ -0.94
SMC1A-204ENST00000463684 PHOX2AO14813 284 aa9.17□□□□□ -0.94
SMC1A-204ENST00000463684 CXorf1O96002 111 aa9.17□□□□□ -0.94
SMC1A-204ENST00000463684 IFNA7P01567 189 aa9.17□□□□□ -0.94
SMC1A-204ENST00000463684 RAB4BP61018 213 aa9.17□□□□□ -0.94
SMC1A-204ENST00000463684 KRTAP26-1Q6PEX3 210 aa9.17□□□□□ -0.94
SMC1A-204ENST00000463684 TMEM97Q5BJF2 176 aa9.16□□□□□ -0.94
SMC1A-204ENST00000463684 NEXN-AS1Q8NBZ9 246 aa9.16□□□□□ -0.94
SMC1A-204ENST00000463684 TMSB15BA0A087X1C1 80 aa9.15□□□□□ -0.94
SMC1A-204ENST00000463684 A0A1W2PRE2 83 aa9.15□□□□□ -0.94
SMC1A-204ENST00000463684 SH2D1AO60880 128 aa9.15□□□□□ -0.94
SMC1A-204ENST00000463684 GAS8-AS1O95177 125 aa9.15□□□□□ -0.94
SMC1A-204ENST00000463684 MBP02144 154 aa9.15□□□□□ -0.94
SMC1A-204ENST00000463684 CHTF8P0CG12 524 aa9.15□□□□□ -0.94
SMC1A-204ENST00000463684 CRIP1P50238 77 aa9.15□□□□□ -0.94
SMC1A-204ENST00000463684 RBX1P62877 108 aa9.15□□□□□ -0.94
SMC1A-204ENST00000463684 ODF1Q14990 250 aa9.15□□□□□ -0.94
SMC1A-204ENST00000463684 ZNF56Q15929 161 aa9.15□□□□□ -0.94
SMC1A-204ENST00000463684 FAM162BQ5T6X4 162 aa9.15□□□□□ -0.94
SMC1A-204ENST00000463684 ENKURQ8TC29 256 aa9.15□□□□□ -0.94
SMC1A-204ENST00000463684 SPACA4Q8TDM5 124 aa9.15□□□□□ -0.94
SMC1A-204ENST00000463684 GAGE6Q13070 117 aa9.14□□□□□ -0.95
SMC1A-204ENST00000463684 Q86TA4 180 aa9.14□□□□□ -0.95
SMC1A-204ENST00000463684 GTSF1Q8WW33 167 aa9.14□□□□□ -0.95
SMC1A-204ENST00000463684 ACTR3CQ9C0K3 210 aaPredicted RBP9.14□□□□□ -0.95
SMC1A-204ENST00000463684 PLAC8Q9NZF1 115 aa9.14□□□□□ -0.95
SMC1A-204ENST00000463684 ZFP30Q9Y2G7 519 aa9.14□□□□□ -0.95
SMC1A-204ENST00000463684 KIF25-AS1Q9Y6Z4 181 aa9.14□□□□□ -0.95
SMC1A-204ENST00000463684 IGLV10-54A0A075B6I4 117 aa9.13□□□□□ -0.95
SMC1A-204ENST00000463684 A0A0J9YXV3 536 aa9.13□□□□□ -0.95
SMC1A-204ENST00000463684 PEX7O00628 323 aa9.13□□□□□ -0.95
SMC1A-204ENST00000463684 REG3AQ06141 175 aa9.13□□□□□ -0.95
SMC1A-204ENST00000463684 WDR73Q6P4I2 378 aa9.13□□□□□ -0.95
SMC1A-204ENST00000463684 DERL1Q9BUN8 251 aa9.13□□□□□ -0.95
SMC1A-204ENST00000463684 TRBV25-1A0A075B6N4 114 aa9.12□□□□□ -0.95
SMC1A-204ENST00000463684 TRAV8-4A0A0B4J246 113 aa9.12□□□□□ -0.95
SMC1A-204ENST00000463684 A6NHS1 94 aa9.12□□□□□ -0.95
SMC1A-204ENST00000463684 F5H697 171 aa9.12□□□□□ -0.95
SMC1A-204ENST00000463684 SSNA1O43805 119 aa9.12□□□□□ -0.95
SMC1A-204ENST00000463684 P01737 135 aa9.12□□□□□ -0.95
SMC1A-204ENST00000463684 SERF2P84101 59 aa9.12□□□□□ -0.95
SMC1A-204ENST00000463684 LINC01559Q495D7 138 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 286.5 ms