RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 HCP5Q6MZN7 132 aa6.56□□□□□ -1.36
HDAC9-219ENST00000461159 BRD3OSQ6XYD6 125 aa6.56□□□□□ -1.36
HDAC9-219ENST00000461159 DYNAPQ8N1N2 210 aa6.56□□□□□ -1.36
HDAC9-219ENST00000461159 PRSS3P2Q8NHM4 247 aa6.56□□□□□ -1.36
HDAC9-219ENST00000461159 ODF3Q96PU9 254 aa6.56□□□□□ -1.36
HDAC9-219ENST00000461159 ZNF747Q9BV97 191 aa6.56□□□□□ -1.36
HDAC9-219ENST00000461159 COX7CP15954 63 aa6.56□□□□□ -1.36
HDAC9-219ENST00000461159 EBI3Q14213 229 aa6.56□□□□□ -1.36
HDAC9-219ENST00000461159 LINC01620Q4KN68 170 aa6.56□□□□□ -1.36
HDAC9-219ENST00000461159 CHAC1Q9BUX1 264 aa6.56□□□□□ -1.36
HDAC9-219ENST00000461159 TRBV6-1A0A0K0K1D8 114 aa6.55□□□□□ -1.36
HDAC9-219ENST00000461159 LGALS9BQ3B8N2 356 aa6.55□□□□□ -1.36
HDAC9-219ENST00000461159 RUSC1-AS1Q66K80 236 aa6.55□□□□□ -1.36
HDAC9-219ENST00000461159 LGALS9CQ6DKI2 356 aa6.55□□□□□ -1.36
HDAC9-219ENST00000461159 ZNF493Q6ZR52 646 aa6.55□□□□□ -1.36
HDAC9-219ENST00000461159 PRNTQ86SH4 94 aa6.55□□□□□ -1.36
HDAC9-219ENST00000461159 TPSG1Q9NRR2 321 aa6.55□□□□□ -1.36
HDAC9-219ENST00000461159 TRAV2A0A0B4J234 112 aa6.55□□□□□ -1.36
HDAC9-219ENST00000461159 H3BTX0 84 aa6.55□□□□□ -1.36
HDAC9-219ENST00000461159 IGLV2-23P01705 113 aa6.55□□□□□ -1.36
HDAC9-219ENST00000461159 CD164Q04900 197 aa6.55□□□□□ -1.36
HDAC9-219ENST00000461159 DEFB113Q30KQ7 82 aa6.55□□□□□ -1.36
HDAC9-219ENST00000461159 POM121L12Q8N7R1 296 aa6.55□□□□□ -1.36
HDAC9-219ENST00000461159 SRSF12Q8WXF0 261 aaKnown RBP6.55□□□□□ -1.36
HDAC9-219ENST00000461159 TEP1Q99973 2627 aaKnown RBP6.54□□□□□ -1.36
HDAC9-219ENST00000461159 TRAV8-1A0A0A6YYK1 113 aa6.54□□□□□ -1.36
HDAC9-219ENST00000461159 TIMM23O14925 209 aa6.54□□□□□ -1.36
HDAC9-219ENST00000461159 AVPP01185 164 aa6.54□□□□□ -1.36
HDAC9-219ENST00000461159 HOXB4P17483 251 aaPredicted RBP6.54□□□□□ -1.36
HDAC9-219ENST00000461159 HLA-DMBP28068 263 aa6.54□□□□□ -1.36
HDAC9-219ENST00000461159 WFDC11Q8NEX6 87 aa6.54□□□□□ -1.36
HDAC9-219ENST00000461159 TMEM158Q8WZ71 300 aa6.54□□□□□ -1.36
HDAC9-219ENST00000461159 Q96MF0 132 aa6.54□□□□□ -1.36
HDAC9-219ENST00000461159 TMEM14CQ9P0S9 112 aa6.54□□□□□ -1.36
HDAC9-219ENST00000461159 CR1P17927 2039 aa6.54□□□□□ -1.36
HDAC9-219ENST00000461159 NIPBLQ6KC79 2804 aaeCLIP6.54□□□□□ -1.36
HDAC9-219ENST00000461159 IGHV1-3A0A0C4DH29 117 aa6.54□□□□□ -1.36
HDAC9-219ENST00000461159 PVRIGQ6DKI7 326 aa6.54□□□□□ -1.36
HDAC9-219ENST00000461159 PIP4P2Q8N4L2 257 aa6.54□□□□□ -1.36
HDAC9-219ENST00000461159 TRAV40A0A0B4J280 105 aa6.53□□□□□ -1.36
HDAC9-219ENST00000461159 ARMS2P0C7Q2 107 aa6.53□□□□□ -1.36
HDAC9-219ENST00000461159 IGHV4-38-2P0DP08 117 aa6.53□□□□□ -1.36
HDAC9-219ENST00000461159 HLA-DRB4P13762 266 aa6.53□□□□□ -1.36
HDAC9-219ENST00000461159 RPL27AP46776 148 aaKnown RBP6.53□□□□□ -1.36
HDAC9-219ENST00000461159 LYZP61626 148 aa6.53□□□□□ -1.36
HDAC9-219ENST00000461159 AMN1Q8IY45 258 aa6.53□□□□□ -1.36
HDAC9-219ENST00000461159 OR8A1Q8NGG7 326 aa6.53□□□□□ -1.36
HDAC9-219ENST00000461159 HLA-DRB4X5D2U9 266 aa6.53□□□□□ -1.36
HDAC9-219ENST00000461159 JMJD1CQ15652 2540 aa6.53□□□□□ -1.36
HDAC9-219ENST00000461159 HIVEP1P15822 2718 aa6.53□□□□□ -1.36
HDAC9-219ENST00000461159 TRAV13-1A0A0B4J241 112 aa6.53□□□□□ -1.36
HDAC9-219ENST00000461159 M0R1W7 72 aa6.53□□□□□ -1.36
HDAC9-219ENST00000461159 NDUFC2O95298 119 aa6.53□□□□□ -1.36
HDAC9-219ENST00000461159 PSMB8P28062 276 aa6.53□□□□□ -1.36
HDAC9-219ENST00000461159 SAA4P35542 130 aa6.53□□□□□ -1.36
HDAC9-219ENST00000461159 TMEM75Q8N9X5 138 aa6.53□□□□□ -1.36
HDAC9-219ENST00000461159 FAM19A4Q96LR4 140 aa6.53□□□□□ -1.36
HDAC9-219ENST00000461159 DPM3Q9P2X0 92 aa6.53□□□□□ -1.36
HDAC9-219ENST00000461159 IGLV2-11P01706 119 aa6.52□□□□□ -1.37
HDAC9-219ENST00000461159 MSMBP08118 114 aa6.52□□□□□ -1.37
HDAC9-219ENST00000461159 MRGPRG-AS1Q2M3A8 158 aa6.52□□□□□ -1.37
HDAC9-219ENST00000461159 PCP2Q8IVA1 136 aa6.52□□□□□ -1.37
HDAC9-219ENST00000461159 ANK3Q12955 4377 aaKnown RBP6.52□□□□□ -1.37
HDAC9-219ENST00000461159 TRAV8-4A0A0B4J246 113 aa6.52□□□□□ -1.37
HDAC9-219ENST00000461159 IL4P05112 153 aa6.52□□□□□ -1.37
HDAC9-219ENST00000461159 F11RQ9Y624 299 aaKnown RBP6.52□□□□□ -1.37
HDAC9-219ENST00000461159 HIVEP2P31629 2446 aa6.51□□□□□ -1.37
HDAC9-219ENST00000461159 IGHV3-21A0A0B4J1V1 117 aa6.51□□□□□ -1.37
HDAC9-219ENST00000461159 FAM240AA0A1B0GVK7 77 aa6.51□□□□□ -1.37
HDAC9-219ENST00000461159 KRTAP1-3Q8IUG1 177 aa6.51□□□□□ -1.37
HDAC9-219ENST00000461159 LINC01600Q96MT4 127 aa6.51□□□□□ -1.37
HDAC9-219ENST00000461159 AGPAT4-IT1Q9H0P7 198 aa6.51□□□□□ -1.37
HDAC9-219ENST00000461159 A0A096LNT2 108 aa6.51□□□□□ -1.37
HDAC9-219ENST00000461159 ODF3BA8MYP8 253 aa6.51□□□□□ -1.37
HDAC9-219ENST00000461159 H7C1H1 209 aa6.51□□□□□ -1.37
HDAC9-219ENST00000461159 HBDP02042 147 aa6.51□□□□□ -1.37
HDAC9-219ENST00000461159 IFI27P40305 119 aaPredicted RBP6.51□□□□□ -1.37
HDAC9-219ENST00000461159 LYPD1Q8N2G4 141 aa6.51□□□□□ -1.37
HDAC9-219ENST00000461159 B4DSR2 109 aa6.5□□□□□ -1.37
HDAC9-219ENST00000461159 D6R8Y8 96 aa6.5□□□□□ -1.37
HDAC9-219ENST00000461159 LINC01619G3V211 115 aa6.5□□□□□ -1.37
HDAC9-219ENST00000461159 UBE2D3P61077 147 aa6.5□□□□□ -1.37
HDAC9-219ENST00000461159 UBE2D2P62837 147 aa6.5□□□□□ -1.37
HDAC9-219ENST00000461159 CACNG7P62955 275 aa6.5□□□□□ -1.37
HDAC9-219ENST00000461159 PAX8Q06710 450 aa6.5□□□□□ -1.37
HDAC9-219ENST00000461159 ORMDL3Q8N138 153 aa6.5□□□□□ -1.37
HDAC9-219ENST00000461159 C1orf158Q8N1D5 194 aa6.5□□□□□ -1.37
HDAC9-219ENST00000461159 ZNF414Q96IQ9 312 aa6.5□□□□□ -1.37
HDAC9-219ENST00000461159 SHANK2-AS3Q9BTD1 123 aa6.5□□□□□ -1.37
HDAC9-219ENST00000461159 TRBV19A0A075B6N1 114 aa6.5□□□□□ -1.37
HDAC9-219ENST00000461159 LOC389332A0A1B0GUA5 103 aa6.5□□□□□ -1.37
HDAC9-219ENST00000461159 NCBP2LA6PVI3 153 aaKnown RBP6.5□□□□□ -1.37
HDAC9-219ENST00000461159 IGKCP01834 107 aa6.5□□□□□ -1.37
HDAC9-219ENST00000461159 RPL13AP40429 203 aaKnown RBP6.5□□□□□ -1.37
HDAC9-219ENST00000461159 PSMB2P49721 201 aa6.5□□□□□ -1.37
HDAC9-219ENST00000461159 PLGLAQ15195 96 aa6.5□□□□□ -1.37
HDAC9-219ENST00000461159 RNF5Q99942 180 aa6.5□□□□□ -1.37
HDAC9-219ENST00000461159 U3KQK5 164 aa6.5□□□□□ -1.37
HDAC9-219ENST00000461159 TRGV11A0A075B6L2 103 aa6.49□□□□□ -1.37
HDAC9-219ENST00000461159 A0A096LNJ9 63 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms