RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 OBSCN-AS1Q96MR7 158 aa1.51□□□□□ -2.17
SPTLC1-203ENST00000461132 Q6ZS92 163 aa1.5□□□□□ -2.17
SPTLC1-203ENST00000461132 ACBD7Q8N6N7 88 aa1.5□□□□□ -2.17
SPTLC1-203ENST00000461132 C10orf105Q8TEF2 133 aa1.5□□□□□ -2.17
SPTLC1-203ENST00000461132 IFI27L1Q96BM0 104 aa1.5□□□□□ -2.17
SPTLC1-203ENST00000461132 AQP10Q96PS8 301 aa1.5□□□□□ -2.17
SPTLC1-203ENST00000461132 ODF3Q96PU9 254 aa1.5□□□□□ -2.17
SPTLC1-203ENST00000461132 LRP5O75197 1615 aa1.5□□□□□ -2.17
SPTLC1-203ENST00000461132 VWDEQ8N2E2 1590 aa1.5□□□□□ -2.17
SPTLC1-203ENST00000461132 ALPK3Q96L96 1907 aa1.5□□□□□ -2.17
SPTLC1-203ENST00000461132 PTPRDP23468 1912 aa1.49□□□□□ -2.17
SPTLC1-203ENST00000461132 TRAV12-3A0A0B4J271 114 aa1.49□□□□□ -2.17
SPTLC1-203ENST00000461132 TRBV10-3A0A0K0K1G6 114 aa1.49□□□□□ -2.17
SPTLC1-203ENST00000461132 HSD52Q0P140 79 aa1.49□□□□□ -2.17
SPTLC1-203ENST00000461132 XAF1Q6GPH4 301 aa1.49□□□□□ -2.17
SPTLC1-203ENST00000461132 SPTSSBQ8NFR3 76 aa1.49□□□□□ -2.17
SPTLC1-203ENST00000461132 LSM10Q969L4 123 aaKnown RBP1.49□□□□□ -2.17
SPTLC1-203ENST00000461132 KRTAP4-1Q9BYQ7 146 aa1.49□□□□□ -2.17
SPTLC1-203ENST00000461132 COA4Q9NYJ1 87 aa1.49□□□□□ -2.17
SPTLC1-203ENST00000461132 MAPKBP1O60336 1514 aa1.49□□□□□ -2.17
SPTLC1-203ENST00000461132 MRC2Q9UBG0 1479 aa1.49□□□□□ -2.17
SPTLC1-203ENST00000461132 EML5Q05BV3 1969 aa1.48□□□□□ -2.17
SPTLC1-203ENST00000461132 TNRC6AQ8NDV7 1962 aaKnown RBP1.48□□□□□ -2.17
SPTLC1-203ENST00000461132 TRAV30A0A087WSZ9 112 aa1.48□□□□□ -2.17
SPTLC1-203ENST00000461132 NCR3O14931 201 aa1.48□□□□□ -2.17
SPTLC1-203ENST00000461132 TFF1P04155 84 aa1.48□□□□□ -2.17
SPTLC1-203ENST00000461132 SPINK8P0C7L1 97 aa1.48□□□□□ -2.17
SPTLC1-203ENST00000461132 RBM3P98179 157 aaKnown RBP1.48□□□□□ -2.17
SPTLC1-203ENST00000461132 Q6ZQY7 126 aa1.48□□□□□ -2.17
SPTLC1-203ENST00000461132 CASZ1Q86V15 1759 aa1.48□□□□□ -2.17
SPTLC1-203ENST00000461132 CCNB3Q8WWL7 1395 aa1.47□□□□□ -2.17
SPTLC1-203ENST00000461132 AKAP11Q9UKA4 1901 aa1.47□□□□□ -2.17
SPTLC1-203ENST00000461132 LOC101927531A0A1B0GV80 90 aa1.47□□□□□ -2.17
SPTLC1-203ENST00000461132 SSSCA1O60232 199 aa1.47□□□□□ -2.17
SPTLC1-203ENST00000461132 CCL8P80075 99 aa1.47□□□□□ -2.17
SPTLC1-203ENST00000461132 DCDP81605 110 aaKnown RBP1.47□□□□□ -2.17
SPTLC1-203ENST00000461132 FAM74A4Q5TZK3 123 aa1.47□□□□□ -2.17
SPTLC1-203ENST00000461132 Q8N8P6 123 aa1.47□□□□□ -2.17
SPTLC1-203ENST00000461132 BET1LQ9NYM9 111 aa1.47□□□□□ -2.17
SPTLC1-203ENST00000461132 IFT140Q96RY7 1462 aa1.47□□□□□ -2.17
SPTLC1-203ENST00000461132 TNRC6BQ9UPQ9 1833 aaKnown RBP1.47□□□□□ -2.17
SPTLC1-203ENST00000461132 SPAG17Q6Q759 2223 aa1.46□□□□□ -2.18
SPTLC1-203ENST00000461132 SDK1Q7Z5N4 2213 aa1.46□□□□□ -2.18
SPTLC1-203ENST00000461132 CDK12Q9NYV4 1490 aaPredicted RBP1.46□□□□□ -2.18
SPTLC1-203ENST00000461132 UBE2L5PA0A1B0GUS4 154 aa1.46□□□□□ -2.18
SPTLC1-203ENST00000461132 OOSP1A8MZH6 123 aa1.46□□□□□ -2.18
SPTLC1-203ENST00000461132 M0R143 59 aa1.46□□□□□ -2.18
SPTLC1-203ENST00000461132 ATP5EP56381 51 aaPredicted RBP1.46□□□□□ -2.18
SPTLC1-203ENST00000461132 CAV3P56539 151 aa1.46□□□□□ -2.18
SPTLC1-203ENST00000461132 UBE2L3P68036 154 aaKnown RBP1.46□□□□□ -2.18
SPTLC1-203ENST00000461132 ZNF818PQ6ZRF7 136 aa1.46□□□□□ -2.18
SPTLC1-203ENST00000461132 C5orf38Q86SI9 138 aa1.46□□□□□ -2.18
SPTLC1-203ENST00000461132 SBSPONQ8IVN8 264 aa1.46□□□□□ -2.18
SPTLC1-203ENST00000461132 MYOZ3Q8TDC0 251 aa1.46□□□□□ -2.18
SPTLC1-203ENST00000461132 AMELYQ99218 206 aa1.46□□□□□ -2.18
SPTLC1-203ENST00000461132 CITO14578 2027 aa1.45□□□□□ -2.18
SPTLC1-203ENST00000461132 PZPP20742 1482 aa1.45□□□□□ -2.18
SPTLC1-203ENST00000461132 KDM6BO15054 1643 aa1.45□□□□□ -2.18
SPTLC1-203ENST00000461132 ATG2AQ2TAZ0 1938 aa1.45□□□□□ -2.18
SPTLC1-203ENST00000461132 TRAV13-2A0A0B4J235 113 aa1.45□□□□□ -2.18
SPTLC1-203ENST00000461132 RBAKDNA6NC62 111 aa1.45□□□□□ -2.18
SPTLC1-203ENST00000461132 FXYD1O00168 92 aa1.45□□□□□ -2.18
SPTLC1-203ENST00000461132 SSBP1Q04837 148 aaKnown RBP1.45□□□□□ -2.18
SPTLC1-203ENST00000461132 INSL4Q14641 139 aa1.45□□□□□ -2.18
SPTLC1-203ENST00000461132 FXYD3Q14802 87 aa1.45□□□□□ -2.18
SPTLC1-203ENST00000461132 ZNF56Q15929 161 aa1.45□□□□□ -2.18
SPTLC1-203ENST00000461132 KRTAP6-3Q3LI67 103 aa1.45□□□□□ -2.18
SPTLC1-203ENST00000461132 LINC00575Q6W349 94 aa1.45□□□□□ -2.18
SPTLC1-203ENST00000461132 DEFB132Q7Z7B7 95 aa1.45□□□□□ -2.18
SPTLC1-203ENST00000461132 CASP8AP2Q9UKL3 1982 aa1.45□□□□□ -2.18
SPTLC1-203ENST00000461132 SIX6O95475 246 aa1.44□□□□□ -2.18
SPTLC1-203ENST00000461132 ANGP03950 147 aaKnown RBP1.44□□□□□ -2.18
SPTLC1-203ENST00000461132 C10orf82Q8WW14 230 aa1.44□□□□□ -2.18
SPTLC1-203ENST00000461132 CYP4F30PQ9H0H9 118 aa1.44□□□□□ -2.18
SPTLC1-203ENST00000461132 AP4S1Q9Y587 144 aa1.44□□□□□ -2.18
SPTLC1-203ENST00000461132 MCM3APO60318 1980 aa1.44□□□□□ -2.18
SPTLC1-203ENST00000461132 SMARCA2P51531 1590 aa1.43□□□□□ -2.18
SPTLC1-203ENST00000461132 VPS8Q8N3P4 1428 aa1.43□□□□□ -2.18
SPTLC1-203ENST00000461132 CNTLNQ9NXG0 1405 aa1.43□□□□□ -2.18
SPTLC1-203ENST00000461132 TRBV7-1A0A0A6YYK4 115 aa1.43□□□□□ -2.18
SPTLC1-203ENST00000461132 TRBV30A0A0K0K1B3 111 aa1.43□□□□□ -2.18
SPTLC1-203ENST00000461132 HCG22E2RYF7 251 aa1.43□□□□□ -2.18
SPTLC1-203ENST00000461132 TMEM262E9PQX1 116 aa1.43□□□□□ -2.18
SPTLC1-203ENST00000461132 H3BQ15 152 aa1.43□□□□□ -2.18
SPTLC1-203ENST00000461132 S100A10P60903 97 aa1.43□□□□□ -2.18
SPTLC1-203ENST00000461132 KRTAP21-3Q3LHN1 58 aa1.43□□□□□ -2.18
SPTLC1-203ENST00000461132 COMMD6Q7Z4G1 85 aa1.43□□□□□ -2.18
SPTLC1-203ENST00000461132 Q86TA4 180 aa1.43□□□□□ -2.18
SPTLC1-203ENST00000461132 C20orf197Q8N268 126 aa1.43□□□□□ -2.18
SPTLC1-203ENST00000461132 TTC9CQ8N5M4 171 aa1.43□□□□□ -2.18
SPTLC1-203ENST00000461132 DSCR8Q96T75 97 aa1.43□□□□□ -2.18
SPTLC1-203ENST00000461132 PLXNA2O75051 1894 aa1.43□□□□□ -2.18
SPTLC1-203ENST00000461132 ZGRF1Q86YA3 2104 aa1.43□□□□□ -2.18
SPTLC1-203ENST00000461132 PTPRMP28827 1452 aa1.43□□□□□ -2.18
SPTLC1-203ENST00000461132 NRKQ7Z2Y5 1582 aa1.42□□□□□ -2.18
SPTLC1-203ENST00000461132 COL4A1P02462 1669 aa1.42□□□□□ -2.18
SPTLC1-203ENST00000461132 CUL7Q14999 1698 aa1.42□□□□□ -2.18
SPTLC1-203ENST00000461132 CPSF1Q10570 1443 aaKnown RBP1.42□□□□□ -2.18
SPTLC1-203ENST00000461132 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.42□□□□□ -2.18
SPTLC1-203ENST00000461132 PKIAP61925 76 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 540.8 ms