RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 LGALS9CQ6DKI2 356 aa15.7■□□□□ 0.1
C9orf3-209ENST00000460573 TPPP3Q9BW30 176 aa15.7■□□□□ 0.1
C9orf3-209ENST00000460573 NUDT3O95989 172 aa15.69■□□□□ 0.1
C9orf3-209ENST00000460573 RHEBQ15382 184 aa15.69■□□□□ 0.1
C9orf3-209ENST00000460573 WDR73Q6P4I2 378 aa15.69■□□□□ 0.1
C9orf3-209ENST00000460573 VSIG2Q96IQ7 327 aa15.69■□□□□ 0.1
C9orf3-209ENST00000460573 GATA1P15976 413 aaPredicted RBP15.68■□□□□ 0.1
C9orf3-209ENST00000460573 LYZL1Q6UWQ5 148 aa15.68■□□□□ 0.1
C9orf3-209ENST00000460573 PLECQ15149 4684 aaKnown RBP15.68■□□□□ 0.1
C9orf3-209ENST00000460573 TRBV6-4A0A1B0GX49 114 aa15.67■□□□□ 0.1
C9orf3-209ENST00000460573 FAM231BA6NCW3 169 aa15.67■□□□□ 0.1
C9orf3-209ENST00000460573 P0DMU3 169 aa15.67■□□□□ 0.1
C9orf3-209ENST00000460573 FAM231AP0DMU4 169 aa15.67■□□□□ 0.1
C9orf3-209ENST00000460573 FAM231CP0DMU5 169 aa15.67■□□□□ 0.1
C9orf3-209ENST00000460573 CTRLP40313 264 aa15.67■□□□□ 0.1
C9orf3-209ENST00000460573 FOXA3P55318 350 aaPredicted RBP15.67■□□□□ 0.1
C9orf3-209ENST00000460573 UFSP1Q6NVU6 142 aa15.67■□□□□ 0.1
C9orf3-209ENST00000460573 OR10G8Q8NGN5 311 aa15.67■□□□□ 0.1
C9orf3-209ENST00000460573 TSKUQ8WUA8 353 aa15.67■□□□□ 0.1
C9orf3-209ENST00000460573 GFRA4Q9GZZ7 299 aa15.67■□□□□ 0.1
C9orf3-209ENST00000460573 JPT2Q9H910 190 aa15.67■□□□□ 0.1
C9orf3-209ENST00000460573 MUC21A0A0G2JKD1 596 aa15.65■□□□□ 0.1
C9orf3-209ENST00000460573 MUC21A0A140T8X8 626 aa15.65■□□□□ 0.1
C9orf3-209ENST00000460573 CRYGDP07320 174 aa15.65■□□□□ 0.1
C9orf3-209ENST00000460573 GTSF1Q8WW33 167 aa15.65■□□□□ 0.1
C9orf3-209ENST00000460573 CNFNQ9BYD5 112 aa15.65■□□□□ 0.1
C9orf3-209ENST00000460573 SAMD10Q9BYL1 202 aa15.65■□□□□ 0.1
C9orf3-209ENST00000460573 ICOSQ9Y6W8 199 aa15.65■□□□□ 0.1
C9orf3-209ENST00000460573 V9GYV3 84 aa15.65■□□□□ 0.1
C9orf3-209ENST00000460573 EPPK1P58107 5090 aaKnown RBP15.64■□□□□ 0.09
C9orf3-209ENST00000460573 A0A087WWC5 75 aa15.64■□□□□ 0.09
C9orf3-209ENST00000460573 IGHV3-73A0A0B4J1V6 119 aa15.64■□□□□ 0.09
C9orf3-209ENST00000460573 RHOHQ15669 191 aa15.64■□□□□ 0.09
C9orf3-209ENST00000460573 MRPL23Q16540 153 aaKnown RBP15.64■□□□□ 0.09
C9orf3-209ENST00000460573 AP1S3Q96PC3 154 aa15.64■□□□□ 0.09
C9orf3-209ENST00000460573 PRADC1Q9BSG0 188 aa15.64■□□□□ 0.09
C9orf3-209ENST00000460573 NACAE9PAV3 2078 aa15.63■□□□□ 0.09
C9orf3-209ENST00000460573 C7orf77A4D0Y5 90 aa15.63■□□□□ 0.09
C9orf3-209ENST00000460573 FAM74A4Q5TZK3 123 aa15.63■□□□□ 0.09
C9orf3-209ENST00000460573 SLC25A29Q8N8R3 303 aa15.63■□□□□ 0.09
C9orf3-209ENST00000460573 A0A087WWL8 130 aa15.62■□□□□ 0.09
C9orf3-209ENST00000460573 TRGC1P0CF51 173 aa15.62■□□□□ 0.09
C9orf3-209ENST00000460573 SMIM17P0DL12 118 aa15.62■□□□□ 0.09
C9orf3-209ENST00000460573 NTF3P20783 257 aa15.62■□□□□ 0.09
C9orf3-209ENST00000460573 SSTP61278 116 aa15.62■□□□□ 0.09
C9orf3-209ENST00000460573 RNF212Q495C1 297 aa15.62■□□□□ 0.09
C9orf3-209ENST00000460573 ATRAIDQ6UW56 229 aa15.62■□□□□ 0.09
C9orf3-209ENST00000460573 CTDSP1Q9GZU7 261 aa15.62■□□□□ 0.09
C9orf3-209ENST00000460573 TMEM242Q9NWH2 141 aa15.62■□□□□ 0.09
C9orf3-209ENST00000460573 A0A096LPF7 62 aa15.61■□□□□ 0.09
C9orf3-209ENST00000460573 GYPEP15421 78 aa15.61■□□□□ 0.09
C9orf3-209ENST00000460573 BORCS7Q96B45 105 aa15.61■□□□□ 0.09
C9orf3-209ENST00000460573 RPS10P5Q9NQ39 176 aa15.61■□□□□ 0.09
C9orf3-209ENST00000460573 K7EQD1 137 aa15.6■□□□□ 0.09
C9orf3-209ENST00000460573 PPP1R2P9O14990 202 aa15.6■□□□□ 0.09
C9orf3-209ENST00000460573 MT-ND4LP03901 98 aa15.6■□□□□ 0.09
C9orf3-209ENST00000460573 CCL18P55774 89 aa15.6■□□□□ 0.09
C9orf3-209ENST00000460573 RAB4BP61018 213 aa15.6■□□□□ 0.09
C9orf3-209ENST00000460573 SH2D6Q7Z4S9 175 aa15.6■□□□□ 0.09
C9orf3-209ENST00000460573 C14orf178Q8N769 122 aaPredicted RBP15.6■□□□□ 0.09
C9orf3-209ENST00000460573 MSRB1Q9NZV6 116 aa15.6■□□□□ 0.09
C9orf3-209ENST00000460573 BIRC6Q9NR09 4857 aa15.6■□□□□ 0.09
C9orf3-209ENST00000460573 HIGD1CA8MV81 97 aa15.59■□□□□ 0.09
C9orf3-209ENST00000460573 SRIP30626 198 aa15.59■□□□□ 0.09
C9orf3-209ENST00000460573 TWIST1Q15672 202 aa15.59■□□□□ 0.09
C9orf3-209ENST00000460573 UBE2DNLQ8IWF7 75 aa15.59■□□□□ 0.09
C9orf3-209ENST00000460573 ANAPC16Q96DE5 110 aa15.59■□□□□ 0.09
C9orf3-209ENST00000460573 PGLYRP4Q96LB8 373 aa15.59■□□□□ 0.09
C9orf3-209ENST00000460573 SMCO4Q9NRQ5 59 aa15.59■□□□□ 0.09
C9orf3-209ENST00000460573 NAT8BQ9UHF3 227 aa15.59■□□□□ 0.09
C9orf3-209ENST00000460573 FAM3BP58499 235 aaPredicted RBP15.58■□□□□ 0.08
C9orf3-209ENST00000460573 Q6ZSN1 163 aa15.58■□□□□ 0.08
C9orf3-209ENST00000460573 NEGR1Q7Z3B1 354 aa15.58■□□□□ 0.08
C9orf3-209ENST00000460573 KIF25-AS1Q9Y6Z4 181 aa15.58■□□□□ 0.08
C9orf3-209ENST00000460573 A0A1B0GUT8 65 aa15.57■□□□□ 0.08
C9orf3-209ENST00000460573 ZNF56Q15929 161 aa15.57■□□□□ 0.08
C9orf3-209ENST00000460573 SMIM27A0A1W2PRY6 76 aa15.56■□□□□ 0.08
C9orf3-209ENST00000460573 SMIM15Q7Z3B0 74 aa15.56■□□□□ 0.08
C9orf3-209ENST00000460573 DPH3P1Q9H4G8 78 aa15.56■□□□□ 0.08
C9orf3-209ENST00000460573 TRBV10-1A0A0K0K1A3 114 aa15.55■□□□□ 0.08
C9orf3-209ENST00000460573 SCO1O75880 301 aa15.55■□□□□ 0.08
C9orf3-209ENST00000460573 LOC100131303A0A0U1RQF7 123 aa15.54■□□□□ 0.08
C9orf3-209ENST00000460573 F5H697 171 aa15.54■□□□□ 0.08
C9orf3-209ENST00000460573 EVI2AP22794 236 aa15.54■□□□□ 0.08
C9orf3-209ENST00000460573 LINC00315P59091 139 aa15.54■□□□□ 0.08
C9orf3-209ENST00000460573 ESRGQ1W209 222 aa15.54■□□□□ 0.08
C9orf3-209ENST00000460573 NUP35Q8NFH5 326 aa15.54■□□□□ 0.08
C9orf3-209ENST00000460573 RIGQ13278 110 aa15.53■□□□□ 0.08
C9orf3-209ENST00000460573 LINC00588Q9Y4M8 146 aa15.53■□□□□ 0.08
C9orf3-209ENST00000460573 H7C1H1 209 aa15.51■□□□□ 0.07
C9orf3-209ENST00000460573 MGPP08493 103 aa15.51■□□□□ 0.07
C9orf3-209ENST00000460573 LYPD5Q6UWN5 251 aa15.51■□□□□ 0.07
C9orf3-209ENST00000460573 TIRAPP58753 221 aa15.5■□□□□ 0.07
C9orf3-209ENST00000460573 RPL36AP83881 106 aaKnown RBP15.5■□□□□ 0.07
C9orf3-209ENST00000460573 RPL36ALQ969Q0 106 aaKnown RBP15.5■□□□□ 0.07
C9orf3-209ENST00000460573 IMMP2LQ96T52 175 aa15.5■□□□□ 0.07
C9orf3-209ENST00000460573 UPK3BQ9BT76 320 aa15.5■□□□□ 0.07
C9orf3-209ENST00000460573 MRPS16Q9Y3D3 137 aaKnown RBP15.5■□□□□ 0.07
C9orf3-209ENST00000460573 A0A1B0GW15 77 aa15.49■□□□□ 0.07
C9orf3-209ENST00000460573 GAGE12JA6NER3 117 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms