RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 SSBP1Q04837 148 aaKnown RBP4.66□□□□□ -1.66
LINC01961-201ENST00000449954 REG3AQ06141 175 aa4.66□□□□□ -1.66
LINC01961-201ENST00000449954 FAAP20Q6NZ36 180 aa4.66□□□□□ -1.66
LINC01961-201ENST00000449954 TMEM14EPQ6UXP3 125 aa4.66□□□□□ -1.66
LINC01961-201ENST00000449954 C15orf56Q8N910 161 aa4.66□□□□□ -1.66
LINC01961-201ENST00000449954 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.66□□□□□ -1.66
LINC01961-201ENST00000449954 C15orf40Q8WUR7 153 aa4.66□□□□□ -1.66
LINC01961-201ENST00000449954 COMMD3Q9UBI1 195 aa4.66□□□□□ -1.66
LINC01961-201ENST00000449954 CARHSP1Q9Y2V2 147 aaKnown RBP4.66□□□□□ -1.66
LINC01961-201ENST00000449954 IGLV7-43P04211 117 aa4.65□□□□□ -1.67
LINC01961-201ENST00000449954 NBEAP1P0C6P0 100 aa4.65□□□□□ -1.67
LINC01961-201ENST00000449954 RBX1P62877 108 aa4.65□□□□□ -1.67
LINC01961-201ENST00000449954 LGALSLQ3ZCW2 172 aaPredicted RBP4.65□□□□□ -1.67
LINC01961-201ENST00000449954 MIC13Q5XKP0 118 aa4.65□□□□□ -1.67
LINC01961-201ENST00000449954 F6UZH7 168 aa4.64□□□□□ -1.67
LINC01961-201ENST00000449954 SSSCA1O60232 199 aa4.64□□□□□ -1.67
LINC01961-201ENST00000449954 RNASE3P12724 160 aaKnown RBP4.64□□□□□ -1.67
LINC01961-201ENST00000449954 RAB2AP61019 212 aa4.64□□□□□ -1.67
LINC01961-201ENST00000449954 TMEM97Q5BJF2 176 aa4.64□□□□□ -1.67
LINC01961-201ENST00000449954 LCE1AQ5T7P2 110 aa4.64□□□□□ -1.67
LINC01961-201ENST00000449954 NRARPQ7Z6K4 114 aa4.64□□□□□ -1.67
LINC01961-201ENST00000449954 SMIM8Q96KF7 97 aa4.64□□□□□ -1.67
LINC01961-201ENST00000449954 SSPOA2VEC9 5147 aa4.64□□□□□ -1.67
LINC01961-201ENST00000449954 USH2AO75445 5202 aa4.63□□□□□ -1.67
LINC01961-201ENST00000449954 TSC22D2O75157 780 aa4.63□□□□□ -1.67
LINC01961-201ENST00000449954 AKAIN1P0CW23 69 aa4.63□□□□□ -1.67
LINC01961-201ENST00000449954 RPL29P47914 159 aaKnown RBP4.63□□□□□ -1.67
LINC01961-201ENST00000449954 AQP4P55087 323 aa4.63□□□□□ -1.67
LINC01961-201ENST00000449954 RAB32Q13637 225 aa4.63□□□□□ -1.67
LINC01961-201ENST00000449954 PHYHIPLQ96FC7 376 aa4.63□□□□□ -1.67
LINC01961-201ENST00000449954 DIRAS2Q96HU8 199 aa4.63□□□□□ -1.67
LINC01961-201ENST00000449954 SLC25A2Q9BXI2 301 aa4.63□□□□□ -1.67
LINC01961-201ENST00000449954 GFRA4Q9GZZ7 299 aa4.63□□□□□ -1.67
LINC01961-201ENST00000449954 TREM1Q9NP99 234 aa4.63□□□□□ -1.67
LINC01961-201ENST00000449954 SCP2D1Q9UJQ7 156 aa4.63□□□□□ -1.67
LINC01961-201ENST00000449954 FCGBPQ9Y6R7 5405 aaPredicted RBP4.62□□□□□ -1.67
LINC01961-201ENST00000449954 GVQW2A0A096LPI5 108 aaPredicted RBP4.62□□□□□ -1.67
LINC01961-201ENST00000449954 HPGDSO60760 199 aa4.62□□□□□ -1.67
LINC01961-201ENST00000449954 AMTP48728 403 aa4.62□□□□□ -1.67
LINC01961-201ENST00000449954 TAS2R30P59541 319 aa4.62□□□□□ -1.67
LINC01961-201ENST00000449954 SUMO2P61956 95 aaKnown RBP4.62□□□□□ -1.67
LINC01961-201ENST00000449954 EIF5AP63241 154 aaKnown RBP4.62□□□□□ -1.67
LINC01961-201ENST00000449954 CYCSP99999 105 aaKnown RBP4.62□□□□□ -1.67
LINC01961-201ENST00000449954 ZNF674Q2M3X9 581 aa4.62□□□□□ -1.67
LINC01961-201ENST00000449954 ASB16-AS1Q495Z4 193 aa4.62□□□□□ -1.67
LINC01961-201ENST00000449954 HIGD2BQ4VC39 106 aa4.62□□□□□ -1.67
LINC01961-201ENST00000449954 TMEM128Q5BJH2 165 aa4.62□□□□□ -1.67
LINC01961-201ENST00000449954 FAM74A4Q5TZK3 123 aa4.62□□□□□ -1.67
LINC01961-201ENST00000449954 OR10G8Q8NGN5 311 aa4.62□□□□□ -1.67
LINC01961-201ENST00000449954 SLIRPQ9GZT3 109 aaKnown RBP4.62□□□□□ -1.67
LINC01961-201ENST00000449954 JPT2Q9H910 190 aa4.62□□□□□ -1.67
LINC01961-201ENST00000449954 LYRM2Q9NU23 88 aaPredicted RBP4.62□□□□□ -1.67
LINC01961-201ENST00000449954 SYNE2Q8WXH0 6885 aaKnown RBP4.61□□□□□ -1.67
LINC01961-201ENST00000449954 IGLV7-46A0A075B6I9 117 aa4.61□□□□□ -1.67
LINC01961-201ENST00000449954 FAM25AB3EWG3 89 aa4.61□□□□□ -1.67
LINC01961-201ENST00000449954 FAM25CB3EWG5 89 aa4.61□□□□□ -1.67
LINC01961-201ENST00000449954 FAM25GB3EWG6 89 aa4.61□□□□□ -1.67
LINC01961-201ENST00000449954 S100A4P26447 101 aaKnown RBP4.61□□□□□ -1.67
LINC01961-201ENST00000449954 MRPS10P82664 201 aaKnown RBP4.61□□□□□ -1.67
LINC01961-201ENST00000449954 CLVS1Q8IUQ0 354 aaPredicted RBP4.61□□□□□ -1.67
LINC01961-201ENST00000449954 FAM167A-AS1Q96KT0 104 aa4.61□□□□□ -1.67
LINC01961-201ENST00000449954 NDFIP1Q9BT67 221 aa4.61□□□□□ -1.67
LINC01961-201ENST00000449954 OR5AC2Q9NZP5 309 aa4.61□□□□□ -1.67
LINC01961-201ENST00000449954 TRBV25-1A0A075B6N4 114 aa4.6□□□□□ -1.67
LINC01961-201ENST00000449954 TGFBR1P36897 503 aa4.6□□□□□ -1.67
LINC01961-201ENST00000449954 KRTAP10-6P60371 365 aaPredicted RBP4.6□□□□□ -1.67
LINC01961-201ENST00000449954 RANP62826 216 aaKnown RBP4.6□□□□□ -1.67
LINC01961-201ENST00000449954 MT1HP80294 61 aa4.6□□□□□ -1.67
LINC01961-201ENST00000449954 ARL16Q0P5N6 197 aa4.6□□□□□ -1.67
LINC01961-201ENST00000449954 GAGE6Q13070 117 aa4.6□□□□□ -1.67
LINC01961-201ENST00000449954 TSKUQ8WUA8 353 aa4.6□□□□□ -1.67
LINC01961-201ENST00000449954 MITD1Q8WV92 249 aa4.6□□□□□ -1.67
LINC01961-201ENST00000449954 FXYD5Q96DB9 178 aa4.6□□□□□ -1.67
LINC01961-201ENST00000449954 CARD19Q96LW7 228 aa4.6□□□□□ -1.67
LINC01961-201ENST00000449954 CNBD2Q96M20 576 aa4.6□□□□□ -1.67
LINC01961-201ENST00000449954 RETNLBQ9BQ08 111 aa4.6□□□□□ -1.67
LINC01961-201ENST00000449954 RPP21Q9H633 154 aaKnown RBP4.6□□□□□ -1.67
LINC01961-201ENST00000449954 WDR83OSQ9Y284 106 aa4.6□□□□□ -1.67
LINC01961-201ENST00000449954 PHLDA3Q9Y5J5 127 aa4.6□□□□□ -1.67
LINC01961-201ENST00000449954 EIF3GO75821 320 aaKnown RBP eCLIP4.59□□□□□ -1.67
LINC01961-201ENST00000449954 RAB5CP51148 216 aa4.59□□□□□ -1.67
LINC01961-201ENST00000449954 PRR27Q6MZM9 219 aa4.59□□□□□ -1.67
LINC01961-201ENST00000449954 CMTM2Q8TAZ6 248 aa4.59□□□□□ -1.67
LINC01961-201ENST00000449954 TVP23CQ96ET8 276 aa4.59□□□□□ -1.67
LINC01961-201ENST00000449954 NMES1Q9C002 83 aa4.59□□□□□ -1.67
LINC01961-201ENST00000449954 UQCC1Q9NVA1 299 aa4.59□□□□□ -1.67
LINC01961-201ENST00000449954 IL36BQ9NZH7 164 aa4.59□□□□□ -1.67
LINC01961-201ENST00000449954 EXTL2Q9UBQ6 330 aa4.59□□□□□ -1.67
LINC01961-201ENST00000449954 MACF1Q9UPN3 7388 aaKnown RBP4.59□□□□□ -1.67
LINC01961-201ENST00000449954 A0A1W2PNN7 141 aa4.58□□□□□ -1.68
LINC01961-201ENST00000449954 FAM74A1Q5RGS3 127 aa4.58□□□□□ -1.68
LINC01961-201ENST00000449954 NTM-AS1Q6ZSK4 140 aa4.58□□□□□ -1.68
LINC01961-201ENST00000449954 C20orf203Q8NBC4 194 aa4.58□□□□□ -1.68
LINC01961-201ENST00000449954 SMIM4Q8WVI0 70 aa4.58□□□□□ -1.68
LINC01961-201ENST00000449954 KRTAP4-1Q9BYQ7 146 aa4.58□□□□□ -1.68
LINC01961-201ENST00000449954 LOC107984640A0A0U1RRK4 108 aa4.57□□□□□ -1.68
LINC01961-201ENST00000449954 A0A1B0GUV1 79 aa4.57□□□□□ -1.68
LINC01961-201ENST00000449954 OR7C2O60412 319 aa4.57□□□□□ -1.68
LINC01961-201ENST00000449954 GCGP01275 180 aa4.57□□□□□ -1.68
LINC01961-201ENST00000449954 FGF6P10767 208 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms