RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 IBA57-AS1B1ANH7 110 aa10.29□□□□□ -0.76
CHD3-205ENST00000449744 FUSP35637 526 aaKnown RBP eCLIP10.29□□□□□ -0.76
CHD3-205ENST00000449744 TMUB2Q71RG4 321 aa10.29□□□□□ -0.76
CHD3-205ENST00000449744 SCO2A0A1W2PP80 73 aa10.28□□□□□ -0.76
CHD3-205ENST00000449744 UFSP1Q6NVU6 142 aa10.28□□□□□ -0.76
CHD3-205ENST00000449744 ZFP82Q8N141 532 aa10.28□□□□□ -0.76
CHD3-205ENST00000449744 C14orf178Q8N769 122 aaPredicted RBP10.28□□□□□ -0.76
CHD3-205ENST00000449744 SFRP2Q96HF1 295 aa10.28□□□□□ -0.76
CHD3-205ENST00000449744 Q9HAA7 133 aa10.28□□□□□ -0.76
CHD3-205ENST00000449744 A0A087WWL8 130 aa10.27□□□□□ -0.77
CHD3-205ENST00000449744 BAGE2Q86Y30 109 aa10.27□□□□□ -0.77
CHD3-205ENST00000449744 SCRT2Q9NQ03 307 aa10.27□□□□□ -0.77
CHD3-205ENST00000449744 A0A087WWC5 75 aa10.26□□□□□ -0.77
CHD3-205ENST00000449744 LINC00694P0DN24 101 aa10.26□□□□□ -0.77
CHD3-205ENST00000449744 EIF5AL1Q6IS14 154 aaKnown RBP10.26□□□□□ -0.77
CHD3-205ENST00000449744 AKAP14Q86UN6 197 aa10.26□□□□□ -0.77
CHD3-205ENST00000449744 Q8N1X5 172 aa10.26□□□□□ -0.77
CHD3-205ENST00000449744 TEX46H3BTG2 121 aa10.25□□□□□ -0.77
CHD3-205ENST00000449744 PRR27Q6MZM9 219 aa10.25□□□□□ -0.77
CHD3-205ENST00000449744 MANBALQ9NQG1 85 aa10.25□□□□□ -0.77
CHD3-205ENST00000449744 GNG13Q9P2W3 67 aa10.25□□□□□ -0.77
CHD3-205ENST00000449744 Q9UF83 564 aa10.25□□□□□ -0.77
CHD3-205ENST00000449744 HSPG2P98160 4391 aa10.24□□□□□ -0.77
CHD3-205ENST00000449744 RAB5CP51148 216 aa10.24□□□□□ -0.77
CHD3-205ENST00000449744 RPL19P84098 196 aaKnown RBP10.24□□□□□ -0.77
CHD3-205ENST00000449744 LAGE3Q14657 143 aa10.24□□□□□ -0.77
CHD3-205ENST00000449744 MLST8Q9BVC4 326 aa10.24□□□□□ -0.77
CHD3-205ENST00000449744 TM2D2Q9BX73 214 aa10.24□□□□□ -0.77
CHD3-205ENST00000449744 DNAH5Q8TE73 4624 aa10.23□□□□□ -0.77
CHD3-205ENST00000449744 CXCL1P09341 107 aa10.23□□□□□ -0.77
CHD3-205ENST00000449744 RPL36AP83881 106 aaKnown RBP10.23□□□□□ -0.77
CHD3-205ENST00000449744 TOR2AQ5JU69 321 aa10.23□□□□□ -0.77
CHD3-205ENST00000449744 RPL36ALQ969Q0 106 aaKnown RBP10.23□□□□□ -0.77
CHD3-205ENST00000449744 URGCP-MRPS24S4R325 110 aa10.23□□□□□ -0.77
CHD3-205ENST00000449744 IGLV5-52A0A0A0MRZ9 124 aa10.22□□□□□ -0.77
CHD3-205ENST00000449744 TRBV10-1A0A0K0K1A3 114 aa10.22□□□□□ -0.77
CHD3-205ENST00000449744 GCSHP23434 173 aa10.22□□□□□ -0.77
CHD3-205ENST00000449744 RPL35P42766 123 aaKnown RBP10.22□□□□□ -0.77
CHD3-205ENST00000449744 CCL20P78556 96 aa10.22□□□□□ -0.77
CHD3-205ENST00000449744 SPANXN1Q5VSR9 72 aa10.22□□□□□ -0.77
CHD3-205ENST00000449744 APOBP04114 4563 aaKnown RBP10.21□□□□□ -0.77
CHD3-205ENST00000449744 TRAV8-3A0A0A6YYJ7 113 aa10.21□□□□□ -0.77
CHD3-205ENST00000449744 TRAV1-1A0A0B4J248 108 aa10.21□□□□□ -0.77
CHD3-205ENST00000449744 LRCOL1A6NCL2 159 aa10.21□□□□□ -0.77
CHD3-205ENST00000449744 KRTAP10-1P60331 282 aa10.21□□□□□ -0.77
CHD3-205ENST00000449744 ZNF56Q15929 161 aa10.21□□□□□ -0.77
CHD3-205ENST00000449744 Q8N3U1 123 aa10.21□□□□□ -0.77
CHD3-205ENST00000449744 OR10AG1Q8NH19 301 aa10.21□□□□□ -0.77
CHD3-205ENST00000449744 NTN5Q8WTR8 489 aaPredicted RBP10.21□□□□□ -0.77
CHD3-205ENST00000449744 SNAI2O43623 268 aa10.2□□□□□ -0.78
CHD3-205ENST00000449744 SULT1A2P50226 295 aa10.2□□□□□ -0.78
CHD3-205ENST00000449744 RAB4BP61018 213 aa10.2□□□□□ -0.78
CHD3-205ENST00000449744 KCNIP4Q6PIL6 250 aa10.2□□□□□ -0.78
CHD3-205ENST00000449744 DAZ4Q86SG3 579 aaKnown RBP10.2□□□□□ -0.78
CHD3-205ENST00000449744 TCTE3Q8IZS6 198 aa10.2□□□□□ -0.78
CHD3-205ENST00000449744 Q8N814 137 aa10.2□□□□□ -0.78
CHD3-205ENST00000449744 C11orf52Q96A22 123 aa10.2□□□□□ -0.78
CHD3-205ENST00000449744 DAZ3Q9NR90 486 aaKnown RBP10.2□□□□□ -0.78
CHD3-205ENST00000449744 TRBV7-3A0A075B6L6 115 aa10.19□□□□□ -0.78
CHD3-205ENST00000449744 IFNA1P01562 189 aa10.19□□□□□ -0.78
CHD3-205ENST00000449744 OR5AL1P0C617 328 aa10.19□□□□□ -0.78
CHD3-205ENST00000449744 SSTP61278 116 aa10.19□□□□□ -0.78
CHD3-205ENST00000449744 DAZAP1Q96EP5 407 aaKnown RBP10.19□□□□□ -0.78
CHD3-205ENST00000449744 DERL1Q9BUN8 251 aa10.19□□□□□ -0.78
CHD3-205ENST00000449744 SSBP4Q9BWG4 385 aaPredicted RBP10.19□□□□□ -0.78
CHD3-205ENST00000449744 A0A087WX48 190 aa10.18□□□□□ -0.78
CHD3-205ENST00000449744 MUC21A0A0G2JKD1 596 aa10.18□□□□□ -0.78
CHD3-205ENST00000449744 MUC21A0A140T8X8 626 aa10.18□□□□□ -0.78
CHD3-205ENST00000449744 EPM2AB3EWF7 344 aa10.18□□□□□ -0.78
CHD3-205ENST00000449744 F5H697 171 aa10.18□□□□□ -0.78
CHD3-205ENST00000449744 SMIM17P0DL12 118 aa10.18□□□□□ -0.78
CHD3-205ENST00000449744 XGP55808 180 aa10.18□□□□□ -0.78
CHD3-205ENST00000449744 UBE2D3P61077 147 aa10.18□□□□□ -0.78
CHD3-205ENST00000449744 UBE2D2P62837 147 aa10.18□□□□□ -0.78
CHD3-205ENST00000449744 CENPWQ5EE01 88 aa10.18□□□□□ -0.78
CHD3-205ENST00000449744 NIT1Q86X76 327 aa10.18□□□□□ -0.78
CHD3-205ENST00000449744 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.18□□□□□ -0.78
CHD3-205ENST00000449744 RMI2Q96E14 147 aa10.18□□□□□ -0.78
CHD3-205ENST00000449744 COX11Q9Y6N1 276 aa10.18□□□□□ -0.78
CHD3-205ENST00000449744 RPS20P60866 119 aaKnown RBP10.17□□□□□ -0.78
CHD3-205ENST00000449744 ELOBQ15370 118 aa10.17□□□□□ -0.78
CHD3-205ENST00000449744 SLC51BQ86UW2 128 aa10.17□□□□□ -0.78
CHD3-205ENST00000449744 OR10G8Q8NGN5 311 aa10.17□□□□□ -0.78
CHD3-205ENST00000449744 PDE6DO43924 150 aa10.16□□□□□ -0.78
CHD3-205ENST00000449744 C1QBP02746 253 aa10.16□□□□□ -0.78
CHD3-205ENST00000449744 GNG4P50150 75 aa10.16□□□□□ -0.78
CHD3-205ENST00000449744 MEF2BQ02080 365 aaPredicted RBP10.16□□□□□ -0.78
CHD3-205ENST00000449744 AP1S3Q96PC3 154 aa10.16□□□□□ -0.78
CHD3-205ENST00000449744 CHCHD7Q9BUK0 85 aa10.16□□□□□ -0.78
CHD3-205ENST00000449744 TPPP3Q9BW30 176 aa10.16□□□□□ -0.78
CHD3-205ENST00000449744 MED9Q9NWA0 146 aa10.16□□□□□ -0.78
CHD3-205ENST00000449744 KLK12Q9UKR0 248 aa10.16□□□□□ -0.78
CHD3-205ENST00000449744 RAB19A4D1S5 217 aa10.15□□□□□ -0.78
CHD3-205ENST00000449744 TMEM262E9PQX1 116 aa10.15□□□□□ -0.78
CHD3-205ENST00000449744 FER1L6-AS1Q8NA97 138 aa10.15□□□□□ -0.78
CHD3-205ENST00000449744 NEXN-AS1Q8NBZ9 246 aa10.15□□□□□ -0.78
CHD3-205ENST00000449744 OR2D3Q8NGH3 330 aa10.15□□□□□ -0.78
CHD3-205ENST00000449744 SMIM12Q96EX1 92 aa10.15□□□□□ -0.78
CHD3-205ENST00000449744 TRBV6-8A0A0A6YYG3 113 aa10.14□□□□□ -0.79
CHD3-205ENST00000449744 XKRY2A2RUG3 117 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms