RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 PRAC2D3DTV9 90 aa7.84□□□□□ -1.15
SCN10A-201ENST00000449082 LMO4P61968 165 aa7.84□□□□□ -1.15
SCN10A-201ENST00000449082 TMEM131Q92545 1883 aa7.84□□□□□ -1.15
SCN10A-201ENST00000449082 FAM167A-AS1Q96KT0 104 aa7.83□□□□□ -1.16
SCN10A-201ENST00000449082 IGHV4-31P0DP07 118 aa7.83□□□□□ -1.16
SCN10A-201ENST00000449082 ORMDL1Q9P0S3 153 aa7.83□□□□□ -1.16
SCN10A-201ENST00000449082 hADV29S1A0JD25 119 aa7.83□□□□□ -1.16
SCN10A-201ENST00000449082 COX7B2Q8TF08 81 aa7.83□□□□□ -1.16
SCN10A-201ENST00000449082 LINC01545Q5VT33 79 aa7.83□□□□□ -1.16
SCN10A-201ENST00000449082 TMEM61Q8N0U2 210 aa7.83□□□□□ -1.16
SCN10A-201ENST00000449082 NDUFA1O15239 70 aa7.82□□□□□ -1.16
SCN10A-201ENST00000449082 IFITM1P13164 125 aa7.82□□□□□ -1.16
SCN10A-201ENST00000449082 TMEM263Q8WUH6 116 aaKnown RBP7.82□□□□□ -1.16
SCN10A-201ENST00000449082 ODF3BA8MYP8 253 aa7.82□□□□□ -1.16
SCN10A-201ENST00000449082 DEFB4AO15263 64 aa7.82□□□□□ -1.16
SCN10A-201ENST00000449082 ZNF124Q15973 351 aa7.82□□□□□ -1.16
SCN10A-201ENST00000449082 MSRB1Q9NZV6 116 aa7.82□□□□□ -1.16
SCN10A-201ENST00000449082 HIST2H2BCQ6DN03 193 aa7.82□□□□□ -1.16
SCN10A-201ENST00000449082 Q6YL49 198 aa7.82□□□□□ -1.16
SCN10A-201ENST00000449082 TINCRA0A1B0GVN0 87 aa7.82□□□□□ -1.16
SCN10A-201ENST00000449082 E7EUB6 86 aa7.82□□□□□ -1.16
SCN10A-201ENST00000449082 CFC1BP0CG36 223 aa7.82□□□□□ -1.16
SCN10A-201ENST00000449082 CFC1P0CG37 223 aa7.82□□□□□ -1.16
SCN10A-201ENST00000449082 SPANXDQ9BXN6 97 aa7.82□□□□□ -1.16
SCN10A-201ENST00000449082 A0A1W2PPM0 123 aa7.82□□□□□ -1.16
SCN10A-201ENST00000449082 K7EP34 96 aa7.82□□□□□ -1.16
SCN10A-201ENST00000449082 IGLV2-14P01704 120 aa7.82□□□□□ -1.16
SCN10A-201ENST00000449082 TRBV12-3P01733 135 aa7.82□□□□□ -1.16
SCN10A-201ENST00000449082 C12orf74Q32Q52 190 aa7.82□□□□□ -1.16
SCN10A-201ENST00000449082 UNQ9165/PRO28630Q6UXU0 137 aa7.82□□□□□ -1.16
SCN10A-201ENST00000449082 MED13LQ71F56 2210 aa7.81□□□□□ -1.16
SCN10A-201ENST00000449082 A0A0J9YX75 114 aa7.81□□□□□ -1.16
SCN10A-201ENST00000449082 FANCD2OSQ96PS1 177 aa7.81□□□□□ -1.16
SCN10A-201ENST00000449082 MAP6D1Q9H9H5 199 aa7.81□□□□□ -1.16
SCN10A-201ENST00000449082 A0A0J9YXV3 536 aa7.81□□□□□ -1.16
SCN10A-201ENST00000449082 IGLL5B9A064 214 aa7.81□□□□□ -1.16
SCN10A-201ENST00000449082 K7ERJ3 54 aa7.8□□□□□ -1.16
SCN10A-201ENST00000449082 NDUFS5O43920 106 aa7.8□□□□□ -1.16
SCN10A-201ENST00000449082 TRAV12-1A0A0B4J245 112 aa7.8□□□□□ -1.16
SCN10A-201ENST00000449082 DEFB125Q8N687 156 aa7.8□□□□□ -1.16
SCN10A-201ENST00000449082 SND1-IT1Q9HBX3 110 aa7.8□□□□□ -1.16
SCN10A-201ENST00000449082 PRO0255Q9UI72 69 aa7.8□□□□□ -1.16
SCN10A-201ENST00000449082 FAM208BQ5VWN6 2430 aa7.8□□□□□ -1.16
SCN10A-201ENST00000449082 CREBBPQ92793 2442 aa7.8□□□□□ -1.16
SCN10A-201ENST00000449082 SHANK1Q9Y566 2161 aa7.8□□□□□ -1.16
SCN10A-201ENST00000449082 IGHV4-4A0A075B6R2 117 aa7.8□□□□□ -1.16
SCN10A-201ENST00000449082 CXCL5P42830 114 aa7.8□□□□□ -1.16
SCN10A-201ENST00000449082 ZNF843Q8N446 348 aa7.8□□□□□ -1.16
SCN10A-201ENST00000449082 VSIG2Q96IQ7 327 aa7.8□□□□□ -1.16
SCN10A-201ENST00000449082 TRBV6-1A0A0K0K1D8 114 aa7.8□□□□□ -1.16
SCN10A-201ENST00000449082 OBSL1O75147 1896 aa7.8□□□□□ -1.16
SCN10A-201ENST00000449082 BAALC-AS2P0C853 105 aa7.79□□□□□ -1.16
SCN10A-201ENST00000449082 WFDC11Q8NEX6 87 aa7.79□□□□□ -1.16
SCN10A-201ENST00000449082 DENND4AQ7Z401 1863 aa7.79□□□□□ -1.16
SCN10A-201ENST00000449082 FSTL3O95633 263 aa7.79□□□□□ -1.16
SCN10A-201ENST00000449082 FUSP35637 526 aaKnown RBP eCLIP7.79□□□□□ -1.16
SCN10A-201ENST00000449082 Q6ZVH6 145 aa7.79□□□□□ -1.16
SCN10A-201ENST00000449082 ETDBQ3ZM63 59 aa7.79□□□□□ -1.16
SCN10A-201ENST00000449082 LINC00574Q9H8X3 128 aa7.79□□□□□ -1.16
SCN10A-201ENST00000449082 UBE2AP49459 152 aa7.79□□□□□ -1.16
SCN10A-201ENST00000449082 C11orf45Q8TAV5 145 aa7.79□□□□□ -1.16
SCN10A-201ENST00000449082 KLK12Q9UKR0 248 aa7.79□□□□□ -1.16
SCN10A-201ENST00000449082 H0YGX0 51 aa7.78□□□□□ -1.16
SCN10A-201ENST00000449082 DYSFO75923 2080 aa7.78□□□□□ -1.16
SCN10A-201ENST00000449082 CTRLP40313 264 aa7.78□□□□□ -1.16
SCN10A-201ENST00000449082 INAFM1C9JVW0 142 aa7.78□□□□□ -1.16
SCN10A-201ENST00000449082 DEFB1P60022 68 aa7.78□□□□□ -1.16
SCN10A-201ENST00000449082 C9orf153Q5TBE3 101 aa7.78□□□□□ -1.16
SCN10A-201ENST00000449082 PCP2Q8IVA1 136 aa7.78□□□□□ -1.16
SCN10A-201ENST00000449082 GTSF1Q8WW33 167 aa7.78□□□□□ -1.16
SCN10A-201ENST00000449082 CCDC140Q96MF4 163 aa7.78□□□□□ -1.16
SCN10A-201ENST00000449082 H3BQ85 93 aa7.78□□□□□ -1.16
SCN10A-201ENST00000449082 LGALS9O00182 355 aa7.78□□□□□ -1.16
SCN10A-201ENST00000449082 IGF1P05019 195 aa7.78□□□□□ -1.16
SCN10A-201ENST00000449082 H3BMG7 143 aa7.78□□□□□ -1.16
SCN10A-201ENST00000449082 TOMM6Q96B49 74 aa7.78□□□□□ -1.16
SCN10A-201ENST00000449082 PTPRQQ9UMZ3 2332 aa7.77□□□□□ -1.16
SCN10A-201ENST00000449082 RPL39P62891 51 aaKnown RBP7.77□□□□□ -1.17
SCN10A-201ENST00000449082 MAJINQ3KP22 176 aa7.77□□□□□ -1.17
SCN10A-201ENST00000449082 TRBV10-1A0A0K0K1A3 114 aa7.77□□□□□ -1.17
SCN10A-201ENST00000449082 SPAG11BQ08648 103 aa7.77□□□□□ -1.17
SCN10A-201ENST00000449082 TIMM17AQ99595 171 aa7.77□□□□□ -1.17
SCN10A-201ENST00000449082 MDFICQ9P1T7 246 aa7.77□□□□□ -1.17
SCN10A-201ENST00000449082 OPRPNQ99935 248 aaPredicted RBP7.77□□□□□ -1.17
SCN10A-201ENST00000449082 COL4A4P53420 1690 aaPredicted RBP7.77□□□□□ -1.17
SCN10A-201ENST00000449082 K7EP13 123 aa7.77□□□□□ -1.17
SCN10A-201ENST00000449082 COL4A3Q01955 1670 aa7.76□□□□□ -1.17
SCN10A-201ENST00000449082 SHISA2Q6UWI4 295 aa7.76□□□□□ -1.17
SCN10A-201ENST00000449082 MUSTN1Q8IVN3 82 aa7.76□□□□□ -1.17
SCN10A-201ENST00000449082 ANKRD29Q8N6D5 301 aa7.76□□□□□ -1.17
SCN10A-201ENST00000449082 C15orf53Q8NAA6 179 aa7.76□□□□□ -1.17
SCN10A-201ENST00000449082 BAALCQ8WXS3 180 aa7.76□□□□□ -1.17
SCN10A-201ENST00000449082 C14orf177Q52M58 125 aa7.76□□□□□ -1.17
SCN10A-201ENST00000449082 C4orf48Q5BLP8 95 aa7.76□□□□□ -1.17
SCN10A-201ENST00000449082 SMIM9A6NGZ8 99 aa7.76□□□□□ -1.17
SCN10A-201ENST00000449082 NTN5Q8WTR8 489 aaPredicted RBP7.76□□□□□ -1.17
SCN10A-201ENST00000449082 ODF3Q96PU9 254 aa7.76□□□□□ -1.17
SCN10A-201ENST00000449082 LINC01548A6NM66 108 aa7.75□□□□□ -1.17
SCN10A-201ENST00000449082 TRACP01848 142 aa7.75□□□□□ -1.17
SCN10A-201ENST00000449082 NCR3O14931 201 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms