RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 HSD52Q0P140 79 aa1.85□□□□□ -2.11
LINC00440-201ENST00000446579 IFI27L1Q96BM0 104 aa1.85□□□□□ -2.11
LINC00440-201ENST00000446579 TEX14Q8IWB6 1497 aa1.85□□□□□ -2.11
LINC00440-201ENST00000446579 FANCD2Q9BXW9 1451 aa1.85□□□□□ -2.11
LINC00440-201ENST00000446579 CFAP43Q8NDM7 1665 aa1.85□□□□□ -2.11
LINC00440-201ENST00000446579 COL5A3P25940 1745 aaPredicted RBP1.85□□□□□ -2.11
LINC00440-201ENST00000446579 SUPT6HQ7KZ85 1726 aaKnown RBP1.85□□□□□ -2.11
LINC00440-201ENST00000446579 ABCA5Q8WWZ7 1642 aa1.84□□□□□ -2.11
LINC00440-201ENST00000446579 COL4A5P29400 1685 aa1.84□□□□□ -2.11
LINC00440-201ENST00000446579 CUL7Q14999 1698 aa1.84□□□□□ -2.11
LINC00440-201ENST00000446579 GAPVD1Q14C86 1478 aa1.84□□□□□ -2.11
LINC00440-201ENST00000446579 ALPK2Q86TB3 2170 aa1.84□□□□□ -2.11
LINC00440-201ENST00000446579 RBM3P98179 157 aaKnown RBP1.84□□□□□ -2.11
LINC00440-201ENST00000446579 C4orf33Q8N1A6 199 aa1.84□□□□□ -2.11
LINC00440-201ENST00000446579 DEFB119Q8N690 84 aa1.84□□□□□ -2.11
LINC00440-201ENST00000446579 ACBD7Q8N6N7 88 aa1.84□□□□□ -2.11
LINC00440-201ENST00000446579 OBSCN-AS1Q96MR7 158 aa1.84□□□□□ -2.11
LINC00440-201ENST00000446579 EPRSP07814 1512 aaKnown RBP1.84□□□□□ -2.11
LINC00440-201ENST00000446579 CC2D2AQ9P2K1 1620 aa1.84□□□□□ -2.12
LINC00440-201ENST00000446579 FREM1Q5H8C1 2179 aa1.83□□□□□ -2.12
LINC00440-201ENST00000446579 MYLKQ15746 1914 aa1.83□□□□□ -2.12
LINC00440-201ENST00000446579 TROQ12816 1431 aaPredicted RBP1.83□□□□□ -2.12
LINC00440-201ENST00000446579 ADGRL2O95490 1459 aa1.83□□□□□ -2.12
LINC00440-201ENST00000446579 POLA1P09884 1462 aaPredicted RBP1.83□□□□□ -2.12
LINC00440-201ENST00000446579 SHANK2Q9UPX8 1470 aa1.83□□□□□ -2.12
LINC00440-201ENST00000446579 UQCRHLA0A096LP55 91 aa1.83□□□□□ -2.12
LINC00440-201ENST00000446579 TRAV12-3A0A0B4J271 114 aa1.83□□□□□ -2.12
LINC00440-201ENST00000446579 IGKV2-29A2NJV5 120 aaPredicted RBP1.83□□□□□ -2.12
LINC00440-201ENST00000446579 OOSP1A8MZH6 123 aa1.83□□□□□ -2.12
LINC00440-201ENST00000446579 UQCRHP07919 91 aa1.83□□□□□ -2.12
LINC00440-201ENST00000446579 SPINK8P0C7L1 97 aa1.83□□□□□ -2.12
LINC00440-201ENST00000446579 RPL37AP61513 92 aaKnown RBP1.83□□□□□ -2.12
LINC00440-201ENST00000446579 CYP2G1PQ6ZSU1 146 aa1.83□□□□□ -2.12
LINC00440-201ENST00000446579 MED12LQ86YW9 2145 aa1.83□□□□□ -2.12
LINC00440-201ENST00000446579 ODF3Q96PU9 254 aa1.83□□□□□ -2.12
LINC00440-201ENST00000446579 ADGRB1O14514 1584 aa1.83□□□□□ -2.12
LINC00440-201ENST00000446579 DNMBPQ6XZF7 1577 aa1.83□□□□□ -2.12
LINC00440-201ENST00000446579 KIAA1549Q9HCM3 1950 aa1.83□□□□□ -2.12
LINC00440-201ENST00000446579 USP54Q70EL1 1684 aa1.83□□□□□ -2.12
LINC00440-201ENST00000446579 PZPP20742 1482 aa1.82□□□□□ -2.12
LINC00440-201ENST00000446579 CCDC141Q6ZP82 1450 aa1.82□□□□□ -2.12
LINC00440-201ENST00000446579 DOCK10Q96BY6 2186 aa1.82□□□□□ -2.12
LINC00440-201ENST00000446579 SAMD9Q5K651 1589 aa1.82□□□□□ -2.12
LINC00440-201ENST00000446579 KIF14Q15058 1648 aa1.82□□□□□ -2.12
LINC00440-201ENST00000446579 TRAV30A0A087WSZ9 112 aa1.82□□□□□ -2.12
LINC00440-201ENST00000446579 PPP1R1CQ8WVI7 109 aa1.82□□□□□ -2.12
LINC00440-201ENST00000446579 RIMS1Q86UR5 1692 aaKnown RBP1.82□□□□□ -2.12
LINC00440-201ENST00000446579 GBF1Q92538 1859 aa1.82□□□□□ -2.12
LINC00440-201ENST00000446579 A2ML1A8K2U0 1454 aa1.82□□□□□ -2.12
LINC00440-201ENST00000446579 BCL9LQ86UU0 1499 aa1.82□□□□□ -2.12
LINC00440-201ENST00000446579 BRWD1Q9NSI6 2320 aa1.82□□□□□ -2.12
LINC00440-201ENST00000446579 HELZP42694 1942 aaKnown RBP1.81□□□□□ -2.12
LINC00440-201ENST00000446579 KIAA0586Q9BVV6 1533 aa1.81□□□□□ -2.12
LINC00440-201ENST00000446579 KDM5DQ9BY66 1539 aa1.81□□□□□ -2.12
LINC00440-201ENST00000446579 EIF2AK4Q9P2K8 1649 aaKnown RBP1.81□□□□□ -2.12
LINC00440-201ENST00000446579 GCC2Q8IWJ2 1684 aa1.81□□□□□ -2.12
LINC00440-201ENST00000446579 NALCNQ8IZF0 1738 aa1.81□□□□□ -2.12
LINC00440-201ENST00000446579 KIDINS220Q9ULH0 1771 aa1.81□□□□□ -2.12
LINC00440-201ENST00000446579 TEX49A0A1B0GTD5 131 aa1.81□□□□□ -2.12
LINC00440-201ENST00000446579 LOC101927531A0A1B0GV80 90 aa1.81□□□□□ -2.12
LINC00440-201ENST00000446579 M0R143 59 aa1.81□□□□□ -2.12
LINC00440-201ENST00000446579 Q8N8P6 123 aa1.81□□□□□ -2.12
LINC00440-201ENST00000446579 AQP10Q96PS8 301 aa1.81□□□□□ -2.12
LINC00440-201ENST00000446579 MYOM2P54296 1465 aa1.81□□□□□ -2.12
LINC00440-201ENST00000446579 CLASP1Q7Z460 1538 aa1.81□□□□□ -2.12
LINC00440-201ENST00000446579 ASXL1Q8IXJ9 1541 aa1.81□□□□□ -2.12
LINC00440-201ENST00000446579 ABCC2Q92887 1545 aa1.81□□□□□ -2.12
LINC00440-201ENST00000446579 IQGAP2Q13576 1575 aa1.81□□□□□ -2.12
LINC00440-201ENST00000446579 NESP48681 1621 aa1.8□□□□□ -2.12
LINC00440-201ENST00000446579 SPEF2Q9C093 1822 aa1.8□□□□□ -2.12
LINC00440-201ENST00000446579 PCDH15Q96QU1 1955 aa1.8□□□□□ -2.12
LINC00440-201ENST00000446579 TRBV10-3A0A0K0K1G6 114 aa1.8□□□□□ -2.12
LINC00440-201ENST00000446579 INSL4Q14641 139 aa1.8□□□□□ -2.12
LINC00440-201ENST00000446579 CRCT1Q9UGL9 99 aa1.8□□□□□ -2.12
LINC00440-201ENST00000446579 MAGI1Q96QZ7 1491 aaPredicted RBP1.8□□□□□ -2.12
LINC00440-201ENST00000446579 CDK13Q14004 1512 aaKnown RBP1.8□□□□□ -2.12
LINC00440-201ENST00000446579 ADGRB2O60241 1585 aa1.8□□□□□ -2.12
LINC00440-201ENST00000446579 KIF21AQ7Z4S6 1674 aa1.8□□□□□ -2.12
LINC00440-201ENST00000446579 LAMB2P55268 1798 aa1.8□□□□□ -2.12
LINC00440-201ENST00000446579 NCR3O14931 201 aa1.79□□□□□ -2.12
LINC00440-201ENST00000446579 S100A10P60903 97 aa1.79□□□□□ -2.12
LINC00440-201ENST00000446579 DCDP81605 110 aaKnown RBP1.79□□□□□ -2.12
LINC00440-201ENST00000446579 XAF1Q6GPH4 301 aa1.79□□□□□ -2.12
LINC00440-201ENST00000446579 C5orf38Q86SI9 138 aa1.79□□□□□ -2.12
LINC00440-201ENST00000446579 DSCR8Q96T75 97 aa1.79□□□□□ -2.12
LINC00440-201ENST00000446579 ANKRD36BQ8N2N9 1353 aa1.79□□□□□ -2.12
LINC00440-201ENST00000446579 IFT140Q96RY7 1462 aa1.79□□□□□ -2.12
LINC00440-201ENST00000446579 MAGI3Q5TCQ9 1506 aa1.79□□□□□ -2.12
LINC00440-201ENST00000446579 MYH1P12882 1939 aa1.79□□□□□ -2.12
LINC00440-201ENST00000446579 PCNX2A6NKB5 2137 aa1.78□□□□□ -2.12
LINC00440-201ENST00000446579 KDM6BO15054 1643 aa1.78□□□□□ -2.12
LINC00440-201ENST00000446579 LAMC1P11047 1609 aa1.78□□□□□ -2.12
LINC00440-201ENST00000446579 PLXNC1O60486 1568 aa1.78□□□□□ -2.12
LINC00440-201ENST00000446579 LAMC3Q9Y6N6 1575 aa1.78□□□□□ -2.12
LINC00440-201ENST00000446579 PRDM15P57071 1507 aaPredicted RBP1.78□□□□□ -2.12
LINC00440-201ENST00000446579 MAGI2Q86UL8 1455 aa1.78□□□□□ -2.12
LINC00440-201ENST00000446579 NLRP1Q9C000 1473 aa1.78□□□□□ -2.12
LINC00440-201ENST00000446579 NSD3Q9BZ95 1437 aa1.78□□□□□ -2.12
LINC00440-201ENST00000446579 SSSCA1O60232 199 aa1.78□□□□□ -2.12
LINC00440-201ENST00000446579 CCL8P80075 99 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms