RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 MIFP14174 115 aa2.16□□□□□ -2.06
HMGB1P48-201ENST00000446155 RPL22P35268 128 aaKnown RBP2.16□□□□□ -2.06
HMGB1P48-201ENST00000446155 ZNF846Q147U1 533 aa2.16□□□□□ -2.06
HMGB1P48-201ENST00000446155 C7orf65Q6ZTY9 151 aa2.16□□□□□ -2.06
HMGB1P48-201ENST00000446155 DEFB119Q8N690 84 aa2.16□□□□□ -2.06
HMGB1P48-201ENST00000446155 OR51A4Q8NGJ6 313 aa2.16□□□□□ -2.06
HMGB1P48-201ENST00000446155 OR5H6Q8NGV6 325 aa2.16□□□□□ -2.06
HMGB1P48-201ENST00000446155 BRK1Q8WUW1 75 aa2.16□□□□□ -2.06
HMGB1P48-201ENST00000446155 CHCHD1Q96BP2 118 aaKnown RBP2.16□□□□□ -2.06
HMGB1P48-201ENST00000446155 PFDN5Q99471 154 aa2.16□□□□□ -2.06
HMGB1P48-201ENST00000446155 RETNLBQ9BQ08 111 aa2.16□□□□□ -2.06
HMGB1P48-201ENST00000446155 TAF9BQ9HBM6 251 aa2.16□□□□□ -2.06
HMGB1P48-201ENST00000446155 C14orf132Q9NPU4 83 aa2.16□□□□□ -2.06
HMGB1P48-201ENST00000446155 LY96Q9Y6Y9 160 aa2.16□□□□□ -2.06
HMGB1P48-201ENST00000446155 LAMA4Q16363 1823 aa2.16□□□□□ -2.06
HMGB1P48-201ENST00000446155 TSC2P49815 1807 aa2.15□□□□□ -2.06
HMGB1P48-201ENST00000446155 EFCAB10A6NFE3 127 aa2.15□□□□□ -2.07
HMGB1P48-201ENST00000446155 H3BRN7 92 aa2.15□□□□□ -2.07
HMGB1P48-201ENST00000446155 OR1I1O60431 355 aa2.15□□□□□ -2.07
HMGB1P48-201ENST00000446155 PROSCO94903 275 aa2.15□□□□□ -2.07
HMGB1P48-201ENST00000446155 UBL3O95164 117 aa2.15□□□□□ -2.07
HMGB1P48-201ENST00000446155 FAM216BQ8N7L0 139 aa2.15□□□□□ -2.07
HMGB1P48-201ENST00000446155 LINC00301Q8NCQ3 95 aa2.15□□□□□ -2.07
HMGB1P48-201ENST00000446155 SPACA4Q8TDM5 124 aa2.15□□□□□ -2.07
HMGB1P48-201ENST00000446155 PRELID3AQ96N28 172 aa2.15□□□□□ -2.07
HMGB1P48-201ENST00000446155 MCEEQ96PE7 176 aa2.15□□□□□ -2.07
HMGB1P48-201ENST00000446155 CST9LQ9H4G1 147 aa2.15□□□□□ -2.07
HMGB1P48-201ENST00000446155 TPT1P8Q9HAU6 139 aa2.15□□□□□ -2.07
HMGB1P48-201ENST00000446155 RTTNQ86VV8 2226 aa2.15□□□□□ -2.07
HMGB1P48-201ENST00000446155 PI4KAP42356 2102 aa2.15□□□□□ -2.07
HMGB1P48-201ENST00000446155 MYH1P12882 1939 aa2.15□□□□□ -2.07
HMGB1P48-201ENST00000446155 MPDZO75970 2070 aa2.14□□□□□ -2.07
HMGB1P48-201ENST00000446155 PLIN4Q96Q06 1357 aa2.14□□□□□ -2.07
HMGB1P48-201ENST00000446155 MYO5AQ9Y4I1 1855 aaKnown RBP2.14□□□□□ -2.07
HMGB1P48-201ENST00000446155 MUC22E2RYF6 1773 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P48-201ENST00000446155 MT-ND4LP03901 98 aa2.14□□□□□ -2.07
HMGB1P48-201ENST00000446155 PAEPP09466 180 aa2.14□□□□□ -2.07
HMGB1P48-201ENST00000446155 ASAH2BP0C7U1 165 aa2.14□□□□□ -2.07
HMGB1P48-201ENST00000446155 SSR2P43308 183 aa2.14□□□□□ -2.07
HMGB1P48-201ENST00000446155 ROMO1P60602 79 aa2.14□□□□□ -2.07
HMGB1P48-201ENST00000446155 HIST1H1AQ02539 215 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P48-201ENST00000446155 TMEM244Q5VVB8 128 aa2.14□□□□□ -2.07
HMGB1P48-201ENST00000446155 OR4B1Q8NGF8 309 aa2.14□□□□□ -2.07
HMGB1P48-201ENST00000446155 OR2T35Q8NGX2 323 aa2.14□□□□□ -2.07
HMGB1P48-201ENST00000446155 DIRC1Q969H9 104 aa2.14□□□□□ -2.07
HMGB1P48-201ENST00000446155 AP1S3Q96PC3 154 aa2.14□□□□□ -2.07
HMGB1P48-201ENST00000446155 TTTY12Q9BZ98 90 aa2.14□□□□□ -2.07
HMGB1P48-201ENST00000446155 PAIP2BQ9ULR5 123 aaKnown RBP2.14□□□□□ -2.07
HMGB1P48-201ENST00000446155 FOCADQ5VW36 1801 aa2.14□□□□□ -2.07
HMGB1P48-201ENST00000446155 ANK2Q01484 3957 aa2.14□□□□□ -2.07
HMGB1P48-201ENST00000446155 COL4A2P08572 1712 aa2.14□□□□□ -2.07
HMGB1P48-201ENST00000446155 NCKAP5O14513 1909 aa2.13□□□□□ -2.07
HMGB1P48-201ENST00000446155 C17orf112F2Z3M2 114 aa2.13□□□□□ -2.07
HMGB1P48-201ENST00000446155 CRYGSP22914 178 aa2.13□□□□□ -2.07
HMGB1P48-201ENST00000446155 RAB5CP51148 216 aa2.13□□□□□ -2.07
HMGB1P48-201ENST00000446155 FOXA3P55318 350 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P48-201ENST00000446155 CDK5R1Q15078 307 aa2.13□□□□□ -2.07
HMGB1P48-201ENST00000446155 ELOBQ15370 118 aa2.13□□□□□ -2.07
HMGB1P48-201ENST00000446155 LRRC18Q8N456 261 aa2.13□□□□□ -2.07
HMGB1P48-201ENST00000446155 OR5A2Q8NGI9 324 aa2.13□□□□□ -2.07
HMGB1P48-201ENST00000446155 NAT14Q8WUY8 206 aa2.13□□□□□ -2.07
HMGB1P48-201ENST00000446155 POP5Q969H6 163 aaKnown RBP2.13□□□□□ -2.07
HMGB1P48-201ENST00000446155 NIT2Q9NQR4 276 aa2.13□□□□□ -2.07
HMGB1P48-201ENST00000446155 U3KQ87 197 aa2.13□□□□□ -2.07
HMGB1P48-201ENST00000446155 ZNF469Q96JG9 3925 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P48-201ENST00000446155 MGAM2Q2M2H8 2515 aa2.13□□□□□ -2.07
HMGB1P48-201ENST00000446155 NUMA1Q14980 2115 aa2.12□□□□□ -2.07
HMGB1P48-201ENST00000446155 PCDH15Q96QU1 1955 aa2.12□□□□□ -2.07
HMGB1P48-201ENST00000446155 BAZ2BQ9UIF8 2168 aaKnown RBP2.12□□□□□ -2.07
HMGB1P48-201ENST00000446155 B4DSR2 109 aa2.12□□□□□ -2.07
HMGB1P48-201ENST00000446155 IGLV1-51P01701 117 aa2.12□□□□□ -2.07
HMGB1P48-201ENST00000446155 IGKV4-1P06312 121 aa2.12□□□□□ -2.07
HMGB1P48-201ENST00000446155 EVI2AP22794 236 aa2.12□□□□□ -2.07
HMGB1P48-201ENST00000446155 MRPS36P82909 103 aaKnown RBP2.12□□□□□ -2.07
HMGB1P48-201ENST00000446155 Q1T7F1 81 aa2.12□□□□□ -2.07
HMGB1P48-201ENST00000446155 MORN4Q8NDC4 146 aa2.12□□□□□ -2.07
HMGB1P48-201ENST00000446155 OR4S1Q8NGB4 309 aa2.12□□□□□ -2.07
HMGB1P48-201ENST00000446155 TXNDC17Q9BRA2 123 aa2.12□□□□□ -2.07
HMGB1P48-201ENST00000446155 SMIM3Q9BZL3 60 aa2.12□□□□□ -2.07
HMGB1P48-201ENST00000446155 CALML5Q9NZT1 146 aa2.12□□□□□ -2.07
HMGB1P48-201ENST00000446155 ANAPC1Q9H1A4 1944 aa2.12□□□□□ -2.07
HMGB1P48-201ENST00000446155 CUBNO60494 3623 aa2.11□□□□□ -2.07
HMGB1P48-201ENST00000446155 KMT2CQ8NEZ4 4911 aaKnown RBP2.11□□□□□ -2.07
HMGB1P48-201ENST00000446155 EML5Q05BV3 1969 aa2.11□□□□□ -2.07
HMGB1P48-201ENST00000446155 MEIKINA0A087WXM9 373 aa2.11□□□□□ -2.07
HMGB1P48-201ENST00000446155 IGKV2D-26A0A0A0MRZ7 120 aa2.11□□□□□ -2.07
HMGB1P48-201ENST00000446155 OR2T8A6NH00 312 aa2.11□□□□□ -2.07
HMGB1P48-201ENST00000446155 M0R233 179 aa2.11□□□□□ -2.07
HMGB1P48-201ENST00000446155 M0R2Z0 102 aa2.11□□□□□ -2.07
HMGB1P48-201ENST00000446155 LYRM1O43325 122 aa2.11□□□□□ -2.07
HMGB1P48-201ENST00000446155 TMEM14EPQ6UXP3 125 aa2.11□□□□□ -2.07
HMGB1P48-201ENST00000446155 BRD3OSQ6XYD6 125 aa2.11□□□□□ -2.07
HMGB1P48-201ENST00000446155 LINC00311Q8N616 119 aa2.11□□□□□ -2.07
HMGB1P48-201ENST00000446155 Q8N814 137 aa2.11□□□□□ -2.07
HMGB1P48-201ENST00000446155 HYLS1Q96M11 299 aa2.11□□□□□ -2.07
HMGB1P48-201ENST00000446155 VPS25Q9BRG1 176 aa2.11□□□□□ -2.07
HMGB1P48-201ENST00000446155 OR5AC2Q9NZP5 309 aa2.11□□□□□ -2.07
HMGB1P48-201ENST00000446155 ZANQ9Y493 2812 aa2.11□□□□□ -2.07
HMGB1P48-201ENST00000446155 DSPPQ9NZW4 1301 aa2.11□□□□□ -2.07
HMGB1P48-201ENST00000446155 ESPL1Q14674 2120 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms