RNA–Protein interactions for RNA: ENST00000444481.3

VCX3B-203, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-203ENST00000444481 GAGE4Q13068 117 aa12.26□□□□□ -0.45
VCX3B-203ENST00000444481 GAGE5Q13069 117 aa12.26□□□□□ -0.45
VCX3B-203ENST00000444481 GAGE13Q4V321 117 aa12.26□□□□□ -0.45
VCX3B-203ENST00000444481 TCTE3Q8IZS6 198 aa12.26□□□□□ -0.45
VCX3B-203ENST00000444481 PCLOQ9Y6V0 5065 aa12.25□□□□□ -0.45
VCX3B-203ENST00000444481 M0R381 172 aa12.25□□□□□ -0.45
VCX3B-203ENST00000444481 FAM74A4Q5TZK3 123 aa12.25□□□□□ -0.45
VCX3B-203ENST00000444481 C14orf178Q8N769 122 aaPredicted RBP12.25□□□□□ -0.45
VCX3B-203ENST00000444481 DNAH5Q8TE73 4624 aa12.24□□□□□ -0.45
VCX3B-203ENST00000444481 LAGE3Q14657 143 aa12.24□□□□□ -0.45
VCX3B-203ENST00000444481 MAPKAPK5-AS1Q8N8E1 139 aa12.24□□□□□ -0.45
VCX3B-203ENST00000444481 TRBV10-1A0A0K0K1A3 114 aa12.23□□□□□ -0.45
VCX3B-203ENST00000444481 PSCAO43653 123 aa12.23□□□□□ -0.45
VCX3B-203ENST00000444481 C11orf52Q96A22 123 aa12.23□□□□□ -0.45
VCX3B-203ENST00000444481 GNG13Q9P2W3 67 aa12.23□□□□□ -0.45
VCX3B-203ENST00000444481 A0A087WWL8 130 aa12.22□□□□□ -0.45
VCX3B-203ENST00000444481 IGHV3-30P01768 117 aa12.22□□□□□ -0.45
VCX3B-203ENST00000444481 IGHV3-33P01772 117 aa12.22□□□□□ -0.45
VCX3B-203ENST00000444481 IGHV3-30-3P0DP02 117 aa12.22□□□□□ -0.45
VCX3B-203ENST00000444481 IGHV3-30-5P0DP03 117 aa12.22□□□□□ -0.45
VCX3B-203ENST00000444481 RPL35P42766 123 aaKnown RBP12.22□□□□□ -0.45
VCX3B-203ENST00000444481 SULT1A2P50226 295 aa12.22□□□□□ -0.45
VCX3B-203ENST00000444481 CCL20P78556 96 aa12.22□□□□□ -0.45
VCX3B-203ENST00000444481 SSBP4Q9BWG4 385 aaPredicted RBP12.22□□□□□ -0.45
VCX3B-203ENST00000444481 Q9UF83 564 aa12.22□□□□□ -0.45
VCX3B-203ENST00000444481 APOBP04114 4563 aaKnown RBP12.21□□□□□ -0.45
VCX3B-203ENST00000444481 SNAI2O43623 268 aa12.21□□□□□ -0.45
VCX3B-203ENST00000444481 RPL19P84098 196 aaKnown RBP12.21□□□□□ -0.45
VCX3B-203ENST00000444481 SLC51BQ86UW2 128 aa12.21□□□□□ -0.45
VCX3B-203ENST00000444481 C1QBP02746 253 aa12.2□□□□□ -0.46
VCX3B-203ENST00000444481 OR5AL1P0C617 328 aa12.2□□□□□ -0.46
VCX3B-203ENST00000444481 RPL36AP83881 106 aaKnown RBP12.2□□□□□ -0.46
VCX3B-203ENST00000444481 PRR27Q6MZM9 219 aa12.2□□□□□ -0.46
VCX3B-203ENST00000444481 Q8N1X5 172 aa12.2□□□□□ -0.46
VCX3B-203ENST00000444481 RPL36ALQ969Q0 106 aaKnown RBP12.2□□□□□ -0.46
VCX3B-203ENST00000444481 TM2D2Q9BX73 214 aa12.2□□□□□ -0.46
VCX3B-203ENST00000444481 Q9HAA7 133 aa12.2□□□□□ -0.46
VCX3B-203ENST00000444481 IFNA1P01562 189 aa12.19□□□□□ -0.46
VCX3B-203ENST00000444481 RAB4BP61018 213 aa12.19□□□□□ -0.46
VCX3B-203ENST00000444481 TOR2AQ5JU69 321 aa12.19□□□□□ -0.46
VCX3B-203ENST00000444481 Q6ZNX1 250 aa12.19□□□□□ -0.46
VCX3B-203ENST00000444481 OR10AG1Q8NH19 301 aa12.19□□□□□ -0.46
VCX3B-203ENST00000444481 SMIM12Q96EX1 92 aa12.19□□□□□ -0.46
VCX3B-203ENST00000444481 KRTAP4-5Q9BYR2 181 aa12.19□□□□□ -0.46
VCX3B-203ENST00000444481 TRBV7-3A0A075B6L6 115 aa12.18□□□□□ -0.46
VCX3B-203ENST00000444481 TRAV8-3A0A0A6YYJ7 113 aa12.18□□□□□ -0.46
VCX3B-203ENST00000444481 LRCOL1A6NCL2 159 aa12.18□□□□□ -0.46
VCX3B-203ENST00000444481 PDE6DO43924 150 aa12.18□□□□□ -0.46
VCX3B-203ENST00000444481 DERL1Q9BUN8 251 aa12.18□□□□□ -0.46
VCX3B-203ENST00000444481 MEF2BQ02080 365 aaPredicted RBP12.17□□□□□ -0.46
VCX3B-203ENST00000444481 SPANXN1Q5VSR9 72 aa12.17□□□□□ -0.46
VCX3B-203ENST00000444481 OR10G8Q8NGN5 311 aa12.17□□□□□ -0.46
VCX3B-203ENST00000444481 NTN5Q8WTR8 489 aaPredicted RBP12.17□□□□□ -0.46
VCX3B-203ENST00000444481 URGCP-MRPS24S4R325 110 aa12.17□□□□□ -0.46
VCX3B-203ENST00000444481 FUSP35637 526 aaKnown RBP eCLIP12.16□□□□□ -0.46
VCX3B-203ENST00000444481 TAGLN2P37802 199 aaKnown RBP12.16□□□□□ -0.46
VCX3B-203ENST00000444481 UBE2D3P61077 147 aa12.16□□□□□ -0.46
VCX3B-203ENST00000444481 UBE2D2P62837 147 aa12.16□□□□□ -0.46
VCX3B-203ENST00000444481 CENPWQ5EE01 88 aa12.16□□□□□ -0.46
VCX3B-203ENST00000444481 DAZAP1Q96EP5 407 aaKnown RBP12.16□□□□□ -0.46
VCX3B-203ENST00000444481 CHCHD7Q9BUK0 85 aa12.16□□□□□ -0.46
VCX3B-203ENST00000444481 GCSHP23434 173 aa12.15□□□□□ -0.46
VCX3B-203ENST00000444481 GNG4P50150 75 aa12.15□□□□□ -0.46
VCX3B-203ENST00000444481 RPS20P60866 119 aaKnown RBP12.15□□□□□ -0.46
VCX3B-203ENST00000444481 ZNF56Q15929 161 aa12.15□□□□□ -0.46
VCX3B-203ENST00000444481 DAZ4Q86SG3 579 aaKnown RBP12.15□□□□□ -0.46
VCX3B-203ENST00000444481 NIT1Q86X76 327 aa12.15□□□□□ -0.46
VCX3B-203ENST00000444481 DAZ3Q9NR90 486 aaKnown RBP12.15□□□□□ -0.46
VCX3B-203ENST00000444481 COX11Q9Y6N1 276 aa12.15□□□□□ -0.46
VCX3B-203ENST00000444481 IGLV2-8P01709 118 aa12.14□□□□□ -0.47
VCX3B-203ENST00000444481 BCL2P10415 239 aa12.14□□□□□ -0.47
VCX3B-203ENST00000444481 Q8N3U1 123 aa12.14□□□□□ -0.47
VCX3B-203ENST00000444481 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.14□□□□□ -0.47
VCX3B-203ENST00000444481 BIN3Q9NQY0 253 aa12.14□□□□□ -0.47
VCX3B-203ENST00000444481 MED9Q9NWA0 146 aa12.14□□□□□ -0.47
VCX3B-203ENST00000444481 VAX2Q9UIW0 290 aa12.14□□□□□ -0.47
VCX3B-203ENST00000444481 IGLV5-52A0A0A0MRZ9 124 aa12.13□□□□□ -0.47
VCX3B-203ENST00000444481 SMIM17P0DL12 118 aa12.13□□□□□ -0.47
VCX3B-203ENST00000444481 KRTAP10-1P60331 282 aa12.13□□□□□ -0.47
VCX3B-203ENST00000444481 ELOBQ15370 118 aa12.13□□□□□ -0.47
VCX3B-203ENST00000444481 AKAP14Q86UN6 197 aa12.13□□□□□ -0.47
VCX3B-203ENST00000444481 Q8N814 137 aa12.13□□□□□ -0.47
VCX3B-203ENST00000444481 ABCA13Q86UQ4 5058 aa12.13□□□□□ -0.47
VCX3B-203ENST00000444481 XKRY2A2RUG3 117 aa12.12□□□□□ -0.47
VCX3B-203ENST00000444481 RAB19A4D1S5 217 aa12.12□□□□□ -0.47
VCX3B-203ENST00000444481 C19orf71A6NCJ1 209 aa12.12□□□□□ -0.47
VCX3B-203ENST00000444481 IGLC6P0CF74 106 aa12.12□□□□□ -0.47
VCX3B-203ENST00000444481 KCNIP4Q6PIL6 250 aa12.12□□□□□ -0.47
VCX3B-203ENST00000444481 NEXN-AS1Q8NBZ9 246 aa12.12□□□□□ -0.47
VCX3B-203ENST00000444481 OR2D3Q8NGH3 330 aa12.12□□□□□ -0.47
VCX3B-203ENST00000444481 RMI2Q96E14 147 aa12.12□□□□□ -0.47
VCX3B-203ENST00000444481 AP1S3Q96PC3 154 aa12.12□□□□□ -0.47
VCX3B-203ENST00000444481 A0A087WX48 190 aa12.11□□□□□ -0.47
VCX3B-203ENST00000444481 MUC21A0A0G2JKD1 596 aa12.11□□□□□ -0.47
VCX3B-203ENST00000444481 MUC21A0A140T8X8 626 aa12.11□□□□□ -0.47
VCX3B-203ENST00000444481 F5H697 171 aa12.11□□□□□ -0.47
VCX3B-203ENST00000444481 FER1L6-AS1Q8NA97 138 aa12.11□□□□□ -0.47
VCX3B-203ENST00000444481 KIF25-AS1Q9Y6Z4 181 aa12.11□□□□□ -0.47
VCX3B-203ENST00000444481 TRBV6-8A0A0A6YYG3 113 aa12.1□□□□□ -0.47
VCX3B-203ENST00000444481 F2Z2F3 143 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms