RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 CACNG7P62955 275 aa10.35□□□□□ -0.75
CSNK1E-210ENST00000442216 RPP21Q9H633 154 aaKnown RBP10.35□□□□□ -0.75
CSNK1E-210ENST00000442216 HYDINQ4G0P3 5121 aa10.35□□□□□ -0.75
CSNK1E-210ENST00000442216 KMT2AQ03164 3969 aa10.35□□□□□ -0.75
CSNK1E-210ENST00000442216 LOC100131303A0A0U1RQF7 123 aa10.34□□□□□ -0.75
CSNK1E-210ENST00000442216 NBDYA0A0U1RRE5 68 aa10.34□□□□□ -0.75
CSNK1E-210ENST00000442216 M0R2N4 97 aa10.34□□□□□ -0.75
CSNK1E-210ENST00000442216 GZMBP10144 247 aa10.34□□□□□ -0.75
CSNK1E-210ENST00000442216 RAB14P61106 215 aa10.34□□□□□ -0.75
CSNK1E-210ENST00000442216 FAM74A4Q5TZK3 123 aa10.34□□□□□ -0.75
CSNK1E-210ENST00000442216 WDR73Q6P4I2 378 aa10.34□□□□□ -0.75
CSNK1E-210ENST00000442216 LINC01551Q86U37 167 aa10.34□□□□□ -0.75
CSNK1E-210ENST00000442216 RNASE7Q9H1E1 156 aaKnown RBP10.34□□□□□ -0.75
CSNK1E-210ENST00000442216 A0A087WWL8 130 aa10.33□□□□□ -0.76
CSNK1E-210ENST00000442216 Q6ZSN1 163 aa10.33□□□□□ -0.76
CSNK1E-210ENST00000442216 DNAH6Q9C0G6 4158 aa10.32□□□□□ -0.76
CSNK1E-210ENST00000442216 TRBV10-1A0A0K0K1A3 114 aa10.32□□□□□ -0.76
CSNK1E-210ENST00000442216 SIVA1O15304 175 aa10.32□□□□□ -0.76
CSNK1E-210ENST00000442216 GATCO43716 136 aaKnown RBP10.32□□□□□ -0.76
CSNK1E-210ENST00000442216 CTRLP40313 264 aa10.32□□□□□ -0.76
CSNK1E-210ENST00000442216 RAB4BP61018 213 aa10.32□□□□□ -0.76
CSNK1E-210ENST00000442216 CT83Q5H943 113 aa10.32□□□□□ -0.76
CSNK1E-210ENST00000442216 TTC32Q5I0X7 151 aa10.32□□□□□ -0.76
CSNK1E-210ENST00000442216 AP1S3Q96PC3 154 aa10.32□□□□□ -0.76
CSNK1E-210ENST00000442216 A8MWL6 223 aa10.31□□□□□ -0.76
CSNK1E-210ENST00000442216 LINC00694P0DN24 101 aa10.31□□□□□ -0.76
CSNK1E-210ENST00000442216 BTF3P20290 206 aaKnown RBP10.31□□□□□ -0.76
CSNK1E-210ENST00000442216 ERVFC1-1P60608 527 aa10.31□□□□□ -0.76
CSNK1E-210ENST00000442216 SRSF3P84103 164 aaKnown RBP10.31□□□□□ -0.76
CSNK1E-210ENST00000442216 TMEM241Q24JQ0 296 aa10.31□□□□□ -0.76
CSNK1E-210ENST00000442216 LYZL1Q6UWQ5 148 aa10.31□□□□□ -0.76
CSNK1E-210ENST00000442216 LINC00336Q6ZUF6 198 aa10.31□□□□□ -0.76
CSNK1E-210ENST00000442216 C14orf178Q8N769 122 aaPredicted RBP10.31□□□□□ -0.76
CSNK1E-210ENST00000442216 ATP6V0E2Q8NHE4 81 aa10.31□□□□□ -0.76
CSNK1E-210ENST00000442216 TPPP3Q9BW30 176 aa10.31□□□□□ -0.76
CSNK1E-210ENST00000442216 CNFNQ9BYD5 112 aa10.31□□□□□ -0.76
CSNK1E-210ENST00000442216 OSTCQ9NRP0 149 aa10.31□□□□□ -0.76
CSNK1E-210ENST00000442216 MUC21A0A0G2JKD1 596 aa10.3□□□□□ -0.76
CSNK1E-210ENST00000442216 MUC21A0A140T8X8 626 aa10.3□□□□□ -0.76
CSNK1E-210ENST00000442216 C9JQL5 133 aa10.3□□□□□ -0.76
CSNK1E-210ENST00000442216 K7EP13 123 aa10.3□□□□□ -0.76
CSNK1E-210ENST00000442216 SMIM17P0DL12 118 aa10.3□□□□□ -0.76
CSNK1E-210ENST00000442216 SOHLH1Q5JUK2 328 aa10.3□□□□□ -0.76
CSNK1E-210ENST00000442216 GTSF1LQ9H1H1 148 aa10.3□□□□□ -0.76
CSNK1E-210ENST00000442216 NAT8Q9UHE5 227 aa10.3□□□□□ -0.76
CSNK1E-210ENST00000442216 KIF25-AS1Q9Y6Z4 181 aa10.3□□□□□ -0.76
CSNK1E-210ENST00000442216 TRGC1P0CF51 173 aa10.29□□□□□ -0.76
CSNK1E-210ENST00000442216 FOXA3P55318 350 aaPredicted RBP10.29□□□□□ -0.76
CSNK1E-210ENST00000442216 ZNF56Q15929 161 aa10.29□□□□□ -0.76
CSNK1E-210ENST00000442216 CLLU1Q5K131 121 aa10.29□□□□□ -0.76
CSNK1E-210ENST00000442216 C1orf134Q5TEV5 83 aa10.29□□□□□ -0.76
CSNK1E-210ENST00000442216 FAM231BA6NCW3 169 aa10.28□□□□□ -0.76
CSNK1E-210ENST00000442216 GAGE12JA6NER3 117 aa10.28□□□□□ -0.76
CSNK1E-210ENST00000442216 NTF3P20783 257 aa10.28□□□□□ -0.76
CSNK1E-210ENST00000442216 SSTP61278 116 aa10.28□□□□□ -0.76
CSNK1E-210ENST00000442216 RPL23P62829 140 aaKnown RBP10.28□□□□□ -0.76
CSNK1E-210ENST00000442216 GAGE1Q13065 139 aa10.28□□□□□ -0.76
CSNK1E-210ENST00000442216 GAGE4Q13068 117 aa10.28□□□□□ -0.76
CSNK1E-210ENST00000442216 GAGE5Q13069 117 aa10.28□□□□□ -0.76
CSNK1E-210ENST00000442216 GAGE13Q4V321 117 aa10.28□□□□□ -0.76
CSNK1E-210ENST00000442216 LELP1Q5T871 98 aa10.28□□□□□ -0.76
CSNK1E-210ENST00000442216 OR10G8Q8NGN5 311 aa10.28□□□□□ -0.76
CSNK1E-210ENST00000442216 ISOC2Q96AB3 205 aa10.28□□□□□ -0.76
CSNK1E-210ENST00000442216 GFRA4Q9GZZ7 299 aa10.28□□□□□ -0.76
CSNK1E-210ENST00000442216 MSRB1Q9NZV6 116 aa10.28□□□□□ -0.76
CSNK1E-210ENST00000442216 TRBV7-3A0A075B6L6 115 aa10.27□□□□□ -0.77
CSNK1E-210ENST00000442216 RTL8CO15255 209 aa10.27□□□□□ -0.77
CSNK1E-210ENST00000442216 LINC00315P59091 139 aa10.27□□□□□ -0.77
CSNK1E-210ENST00000442216 RPL36AP83881 106 aaKnown RBP10.27□□□□□ -0.77
CSNK1E-210ENST00000442216 IFITM2Q01629 132 aa10.27□□□□□ -0.77
CSNK1E-210ENST00000442216 C15orf54Q8N8G6 183 aa10.27□□□□□ -0.77
CSNK1E-210ENST00000442216 TSKUQ8WUA8 353 aa10.27□□□□□ -0.77
CSNK1E-210ENST00000442216 GTSF1Q8WW33 167 aa10.27□□□□□ -0.77
CSNK1E-210ENST00000442216 RPL36ALQ969Q0 106 aaKnown RBP10.27□□□□□ -0.77
CSNK1E-210ENST00000442216 Q9UF83 564 aa10.27□□□□□ -0.77
CSNK1E-210ENST00000442216 TRAV9-2A0A087WT02 112 aa10.26□□□□□ -0.77
CSNK1E-210ENST00000442216 A0A087WWC5 75 aa10.26□□□□□ -0.77
CSNK1E-210ENST00000442216 TRAV8-6A0A0B4J262 113 aa10.26□□□□□ -0.77
CSNK1E-210ENST00000442216 F5H697 171 aa10.26□□□□□ -0.77
CSNK1E-210ENST00000442216 DNAH10OSP0CZ25 163 aa10.26□□□□□ -0.77
CSNK1E-210ENST00000442216 C6orf223Q8N319 242 aa10.26□□□□□ -0.77
CSNK1E-210ENST00000442216 DPH3P1Q9H4G8 78 aa10.26□□□□□ -0.77
CSNK1E-210ENST00000442216 H7C1H1 209 aa10.25□□□□□ -0.77
CSNK1E-210ENST00000442216 UBE2D3P61077 147 aa10.25□□□□□ -0.77
CSNK1E-210ENST00000442216 UBE2D2P62837 147 aa10.25□□□□□ -0.77
CSNK1E-210ENST00000442216 TWIST1Q15672 202 aa10.25□□□□□ -0.77
CSNK1E-210ENST00000442216 WFDC10BQ8IUB3 73 aa10.25□□□□□ -0.77
CSNK1E-210ENST00000442216 KRTAP1-5Q9BYS1 174 aa10.25□□□□□ -0.77
CSNK1E-210ENST00000442216 V9GYV3 84 aa10.25□□□□□ -0.77
CSNK1E-210ENST00000442216 IGHV3-38A0A0C4DH36 116 aa10.24□□□□□ -0.77
CSNK1E-210ENST00000442216 EVI2AP22794 236 aa10.24□□□□□ -0.77
CSNK1E-210ENST00000442216 ADIRFQ15847 76 aa10.24□□□□□ -0.77
CSNK1E-210ENST00000442216 OR10J3Q5JRS4 329 aa10.24□□□□□ -0.77
CSNK1E-210ENST00000442216 C10orf126Q8N4M7 172 aa10.24□□□□□ -0.77
CSNK1E-210ENST00000442216 NEXN-AS1Q8NBZ9 246 aa10.24□□□□□ -0.77
CSNK1E-210ENST00000442216 BORCS7Q96B45 105 aa10.24□□□□□ -0.77
CSNK1E-210ENST00000442216 LINC01556Q5JQF7 62 aa10.23□□□□□ -0.77
CSNK1E-210ENST00000442216 SMIM15Q7Z3B0 74 aa10.23□□□□□ -0.77
CSNK1E-210ENST00000442216 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.23□□□□□ -0.77
CSNK1E-210ENST00000442216 DNAJC30Q96LL9 226 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms