RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 RNASE7Q9H1E1 156 aaKnown RBP8.15□□□□□ -1.1
HSPG2-206ENST00000439717 RPP21Q9H633 154 aaKnown RBP8.15□□□□□ -1.1
HSPG2-206ENST00000439717 NACAE9PAV3 2078 aa8.15□□□□□ -1.11
HSPG2-206ENST00000439717 IGLV2-18A0A075B6J9 118 aa8.14□□□□□ -1.11
HSPG2-206ENST00000439717 A0A087WWL8 130 aa8.14□□□□□ -1.11
HSPG2-206ENST00000439717 LOC100131303A0A0U1RQF7 123 aa8.14□□□□□ -1.11
HSPG2-206ENST00000439717 CACNG7P62955 275 aa8.14□□□□□ -1.11
HSPG2-206ENST00000439717 FAM74A4Q5TZK3 123 aa8.14□□□□□ -1.11
HSPG2-206ENST00000439717 Q6ZR54 194 aa8.14□□□□□ -1.11
HSPG2-206ENST00000439717 Q6ZSN1 163 aa8.14□□□□□ -1.11
HSPG2-206ENST00000439717 LINC01551Q86U37 167 aa8.14□□□□□ -1.11
HSPG2-206ENST00000439717 TPPP3Q9BW30 176 aa8.14□□□□□ -1.11
HSPG2-206ENST00000439717 Q9H8V8 135 aa8.14□□□□□ -1.11
HSPG2-206ENST00000439717 C9JQL5 133 aa8.13□□□□□ -1.11
HSPG2-206ENST00000439717 M0R2N4 97 aa8.13□□□□□ -1.11
HSPG2-206ENST00000439717 GATCO43716 136 aaKnown RBP8.13□□□□□ -1.11
HSPG2-206ENST00000439717 TIRAPP58753 221 aa8.13□□□□□ -1.11
HSPG2-206ENST00000439717 ERVFC1-1P60608 527 aa8.13□□□□□ -1.11
HSPG2-206ENST00000439717 SRSF3P84103 164 aaKnown RBP8.13□□□□□ -1.11
HSPG2-206ENST00000439717 WDR73Q6P4I2 378 aa8.13□□□□□ -1.11
HSPG2-206ENST00000439717 MUC21A0A0G2JKD1 596 aa8.12□□□□□ -1.11
HSPG2-206ENST00000439717 TRBV10-1A0A0K0K1A3 114 aa8.12□□□□□ -1.11
HSPG2-206ENST00000439717 NBDYA0A0U1RRE5 68 aa8.12□□□□□ -1.11
HSPG2-206ENST00000439717 MUC21A0A140T8X8 626 aa8.12□□□□□ -1.11
HSPG2-206ENST00000439717 SMIM17P0DL12 118 aa8.12□□□□□ -1.11
HSPG2-206ENST00000439717 CTRLP40313 264 aa8.12□□□□□ -1.11
HSPG2-206ENST00000439717 RAB4BP61018 213 aa8.12□□□□□ -1.11
HSPG2-206ENST00000439717 TMEM241Q24JQ0 296 aa8.12□□□□□ -1.11
HSPG2-206ENST00000439717 CT83Q5H943 113 aa8.12□□□□□ -1.11
HSPG2-206ENST00000439717 C14orf178Q8N769 122 aaPredicted RBP8.12□□□□□ -1.11
HSPG2-206ENST00000439717 AP1S3Q96PC3 154 aa8.12□□□□□ -1.11
HSPG2-206ENST00000439717 A8MWL6 223 aa8.11□□□□□ -1.11
HSPG2-206ENST00000439717 SSTP61278 116 aa8.11□□□□□ -1.11
HSPG2-206ENST00000439717 TTC32Q5I0X7 151 aa8.11□□□□□ -1.11
HSPG2-206ENST00000439717 CLLU1Q5K131 121 aa8.11□□□□□ -1.11
HSPG2-206ENST00000439717 LYZL1Q6UWQ5 148 aa8.11□□□□□ -1.11
HSPG2-206ENST00000439717 CNFNQ9BYD5 112 aa8.11□□□□□ -1.11
HSPG2-206ENST00000439717 OSTCQ9NRP0 149 aa8.11□□□□□ -1.11
HSPG2-206ENST00000439717 NAT8Q9UHE5 227 aa8.11□□□□□ -1.11
HSPG2-206ENST00000439717 KIF25-AS1Q9Y6Z4 181 aa8.11□□□□□ -1.11
HSPG2-206ENST00000439717 GAGE12JA6NER3 117 aa8.1□□□□□ -1.11
HSPG2-206ENST00000439717 SIVA1O15304 175 aa8.1□□□□□ -1.11
HSPG2-206ENST00000439717 TRGC1P0CF51 173 aa8.1□□□□□ -1.11
HSPG2-206ENST00000439717 LINC00694P0DN24 101 aa8.1□□□□□ -1.11
HSPG2-206ENST00000439717 GAGE1Q13065 139 aa8.1□□□□□ -1.11
HSPG2-206ENST00000439717 GAGE4Q13068 117 aa8.1□□□□□ -1.11
HSPG2-206ENST00000439717 GAGE5Q13069 117 aa8.1□□□□□ -1.11
HSPG2-206ENST00000439717 ZNF56Q15929 161 aa8.1□□□□□ -1.11
HSPG2-206ENST00000439717 GAGE13Q4V321 117 aa8.1□□□□□ -1.11
HSPG2-206ENST00000439717 SOHLH1Q5JUK2 328 aa8.1□□□□□ -1.11
HSPG2-206ENST00000439717 ATP6V0E2Q8NHE4 81 aa8.1□□□□□ -1.11
HSPG2-206ENST00000439717 GTSF1LQ9H1H1 148 aa8.1□□□□□ -1.11
HSPG2-206ENST00000439717 FRAS1Q86XX4 4008 aa8.1□□□□□ -1.11
HSPG2-206ENST00000439717 BTF3P20290 206 aaKnown RBP8.09□□□□□ -1.11
HSPG2-206ENST00000439717 FOXA3P55318 350 aaPredicted RBP8.09□□□□□ -1.11
HSPG2-206ENST00000439717 RPL23P62829 140 aaKnown RBP8.09□□□□□ -1.11
HSPG2-206ENST00000439717 IFITM2Q01629 132 aa8.09□□□□□ -1.11
HSPG2-206ENST00000439717 C1orf134Q5TEV5 83 aa8.09□□□□□ -1.11
HSPG2-206ENST00000439717 LINC00336Q6ZUF6 198 aa8.09□□□□□ -1.11
HSPG2-206ENST00000439717 C15orf54Q8N8G6 183 aa8.09□□□□□ -1.11
HSPG2-206ENST00000439717 OR10G8Q8NGN5 311 aa8.09□□□□□ -1.11
HSPG2-206ENST00000439717 GTSF1Q8WW33 167 aa8.09□□□□□ -1.11
HSPG2-206ENST00000439717 ISOC2Q96AB3 205 aa8.09□□□□□ -1.11
HSPG2-206ENST00000439717 GFRA4Q9GZZ7 299 aa8.09□□□□□ -1.11
HSPG2-206ENST00000439717 DNAH10Q8IVF4 4471 aa8.08□□□□□ -1.12
HSPG2-206ENST00000439717 TRBV7-3A0A075B6L6 115 aa8.08□□□□□ -1.12
HSPG2-206ENST00000439717 TRAV8-6A0A0B4J262 113 aa8.08□□□□□ -1.12
HSPG2-206ENST00000439717 FAM231BA6NCW3 169 aa8.08□□□□□ -1.12
HSPG2-206ENST00000439717 F5H697 171 aa8.08□□□□□ -1.12
HSPG2-206ENST00000439717 K7EP13 123 aa8.08□□□□□ -1.12
HSPG2-206ENST00000439717 NTF3P20783 257 aa8.08□□□□□ -1.12
HSPG2-206ENST00000439717 LINC00315P59091 139 aa8.08□□□□□ -1.12
HSPG2-206ENST00000439717 RPL36AP83881 106 aaKnown RBP8.08□□□□□ -1.12
HSPG2-206ENST00000439717 TWIST1Q15672 202 aa8.08□□□□□ -1.12
HSPG2-206ENST00000439717 ADIRFQ15847 76 aa8.08□□□□□ -1.12
HSPG2-206ENST00000439717 LELP1Q5T871 98 aa8.08□□□□□ -1.12
HSPG2-206ENST00000439717 TSKUQ8WUA8 353 aa8.08□□□□□ -1.12
HSPG2-206ENST00000439717 RPL36ALQ969Q0 106 aaKnown RBP8.08□□□□□ -1.12
HSPG2-206ENST00000439717 MSRB1Q9NZV6 116 aa8.08□□□□□ -1.12
HSPG2-206ENST00000439717 Q9UF83 564 aa8.08□□□□□ -1.12
HSPG2-206ENST00000439717 TRAV9-2A0A087WT02 112 aa8.07□□□□□ -1.12
HSPG2-206ENST00000439717 A0A087WWC5 75 aa8.07□□□□□ -1.12
HSPG2-206ENST00000439717 DNAH10OSP0CZ25 163 aa8.07□□□□□ -1.12
HSPG2-206ENST00000439717 WFDC10BQ8IUB3 73 aa8.07□□□□□ -1.12
HSPG2-206ENST00000439717 C6orf223Q8N319 242 aa8.07□□□□□ -1.12
HSPG2-206ENST00000439717 DPH3P1Q9H4G8 78 aa8.07□□□□□ -1.12
HSPG2-206ENST00000439717 H7C1H1 209 aa8.06□□□□□ -1.12
HSPG2-206ENST00000439717 RTL8CO15255 209 aa8.06□□□□□ -1.12
HSPG2-206ENST00000439717 MGPP08493 103 aa8.06□□□□□ -1.12
HSPG2-206ENST00000439717 EVI2AP22794 236 aa8.06□□□□□ -1.12
HSPG2-206ENST00000439717 UBE2D3P61077 147 aa8.06□□□□□ -1.12
HSPG2-206ENST00000439717 UBE2D2P62837 147 aa8.06□□□□□ -1.12
HSPG2-206ENST00000439717 OR10J3Q5JRS4 329 aa8.06□□□□□ -1.12
HSPG2-206ENST00000439717 SMIM15Q7Z3B0 74 aa8.06□□□□□ -1.12
HSPG2-206ENST00000439717 NEXN-AS1Q8NBZ9 246 aa8.06□□□□□ -1.12
HSPG2-206ENST00000439717 BORCS7Q96B45 105 aa8.06□□□□□ -1.12
HSPG2-206ENST00000439717 PGLYRP4Q96LB8 373 aa8.06□□□□□ -1.12
HSPG2-206ENST00000439717 KRTAP1-5Q9BYS1 174 aa8.06□□□□□ -1.12
HSPG2-206ENST00000439717 V9GYV3 84 aa8.06□□□□□ -1.12
HSPG2-206ENST00000439717 DNAH2Q9P225 4427 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms