RNA–Protein interactions for RNA: ENST00000439706.5

SLC38A1-202, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-202ENST00000439706 PSMG4Q5JS54 123 aa9.41□□□□□ -0.9
SLC38A1-202ENST00000439706 Q8N9W7 124 aa9.41□□□□□ -0.9
SLC38A1-202ENST00000439706 ZNF48Q96MX3 618 aaPredicted RBP9.41□□□□□ -0.9
SLC38A1-202ENST00000439706 TRAV12-2A0A075B6T6 113 aa9.41□□□□□ -0.9
SLC38A1-202ENST00000439706 TRAV12-3A0A0B4J271 114 aa9.41□□□□□ -0.9
SLC38A1-202ENST00000439706 ELANEP08246 267 aa9.41□□□□□ -0.9
SLC38A1-202ENST00000439706 CDSNQ15517 529 aa9.41□□□□□ -0.9
SLC38A1-202ENST00000439706 Q6ZSV7 163 aa9.41□□□□□ -0.9
SLC38A1-202ENST00000439706 AJUBAQ96IF1 538 aa9.41□□□□□ -0.9
SLC38A1-202ENST00000439706 CELSR2Q9HCU4 2923 aa9.41□□□□□ -0.9
SLC38A1-202ENST00000439706 SNCGO76070 127 aa9.4□□□□□ -0.9
SLC38A1-202ENST00000439706 CRYGDP07320 174 aa9.4□□□□□ -0.9
SLC38A1-202ENST00000439706 CD7P09564 240 aa9.4□□□□□ -0.9
SLC38A1-202ENST00000439706 TTC32Q5I0X7 151 aa9.4□□□□□ -0.9
SLC38A1-202ENST00000439706 BRD3OSQ6XYD6 125 aa9.4□□□□□ -0.9
SLC38A1-202ENST00000439706 SPXQ9BT56 116 aa9.4□□□□□ -0.9
SLC38A1-202ENST00000439706 PRO1854Q9UHT4 67 aa9.4□□□□□ -0.9
SLC38A1-202ENST00000439706 EDN2P20800 178 aa9.4□□□□□ -0.91
SLC38A1-202ENST00000439706 GAGE2BQ13066 116 aa9.4□□□□□ -0.91
SLC38A1-202ENST00000439706 ZNF56Q15929 161 aa9.4□□□□□ -0.91
SLC38A1-202ENST00000439706 GAGE2EQ4V326 116 aa9.4□□□□□ -0.91
SLC38A1-202ENST00000439706 GAGE2DQ9UEU5 116 aa9.4□□□□□ -0.91
SLC38A1-202ENST00000439706 ZNRF2Q8NHG8 242 aa9.39□□□□□ -0.91
SLC38A1-202ENST00000439706 SAA4P35542 130 aa9.39□□□□□ -0.91
SLC38A1-202ENST00000439706 TSHBP01222 138 aa9.38□□□□□ -0.91
SLC38A1-202ENST00000439706 IGFL3Q6UXB1 125 aa9.38□□□□□ -0.91
SLC38A1-202ENST00000439706 MUC4Q99102 2169 aa9.38□□□□□ -0.91
SLC38A1-202ENST00000439706 TRAV12-1A0A0B4J245 112 aa9.38□□□□□ -0.91
SLC38A1-202ENST00000439706 TRAV21A0A0B4J279 112 aa9.38□□□□□ -0.91
SLC38A1-202ENST00000439706 SDHAF1A6NFY7 115 aa9.38□□□□□ -0.91
SLC38A1-202ENST00000439706 J3QQQ9 107 aa9.38□□□□□ -0.91
SLC38A1-202ENST00000439706 UBE2D1P51668 147 aa9.38□□□□□ -0.91
SLC38A1-202ENST00000439706 MUSTN1Q8IVN3 82 aa9.38□□□□□ -0.91
SLC38A1-202ENST00000439706 C10orf126Q8N4M7 172 aa9.38□□□□□ -0.91
SLC38A1-202ENST00000439706 EEF1AKMT3Q96AZ1 226 aa9.38□□□□□ -0.91
SLC38A1-202ENST00000439706 RBAKDNA6NC62 111 aa9.38□□□□□ -0.91
SLC38A1-202ENST00000439706 A8MZ25 164 aa9.38□□□□□ -0.91
SLC38A1-202ENST00000439706 CCDC179H3BU77 68 aa9.38□□□□□ -0.91
SLC38A1-202ENST00000439706 CEMP1Q6PRD7 247 aaPredicted RBP9.38□□□□□ -0.91
SLC38A1-202ENST00000439706 COX8CQ7Z4L0 72 aa9.38□□□□□ -0.91
SLC38A1-202ENST00000439706 Q8NA96 180 aa9.38□□□□□ -0.91
SLC38A1-202ENST00000439706 ERG28Q9UKR5 140 aa9.38□□□□□ -0.91
SLC38A1-202ENST00000439706 CACNA1AO00555 2505 aa9.38□□□□□ -0.91
SLC38A1-202ENST00000439706 JMJD1CQ15652 2540 aa9.37□□□□□ -0.91
SLC38A1-202ENST00000439706 SMIM20Q8N5G0 67 aa9.37□□□□□ -0.91
SLC38A1-202ENST00000439706 DAND5Q8N907 189 aa9.37□□□□□ -0.91
SLC38A1-202ENST00000439706 ITPR1Q14643 2758 aa9.37□□□□□ -0.91
SLC38A1-202ENST00000439706 FAM159AQ6UWV7 190 aa9.37□□□□□ -0.91
SLC38A1-202ENST00000439706 LINC01546A6NGU7 62 aa9.36□□□□□ -0.91
SLC38A1-202ENST00000439706 PF4V1P10720 104 aa9.36□□□□□ -0.91
SLC38A1-202ENST00000439706 PMVKQ15126 192 aa9.36□□□□□ -0.91
SLC38A1-202ENST00000439706 LYRM7Q5U5X0 104 aa9.36□□□□□ -0.91
SLC38A1-202ENST00000439706 ZFAND2AQ8N6M9 145 aa9.36□□□□□ -0.91
SLC38A1-202ENST00000439706 ZANQ9Y493 2812 aa9.36□□□□□ -0.91
SLC38A1-202ENST00000439706 IGLV4-69A0A075B6H9 119 aa9.36□□□□□ -0.91
SLC38A1-202ENST00000439706 A0A0J9YXV3 536 aa9.36□□□□□ -0.91
SLC38A1-202ENST00000439706 IGHV3-30P01768 117 aa9.36□□□□□ -0.91
SLC38A1-202ENST00000439706 IGHV3-30-5P0DP03 117 aa9.36□□□□□ -0.91
SLC38A1-202ENST00000439706 KLK9Q9UKQ9 250 aa9.36□□□□□ -0.91
SLC38A1-202ENST00000439706 PRM2P04554 102 aa9.35□□□□□ -0.91
SLC38A1-202ENST00000439706 COX6B1P14854 86 aa9.35□□□□□ -0.91
SLC38A1-202ENST00000439706 UBE2D3P61077 147 aa9.35□□□□□ -0.91
SLC38A1-202ENST00000439706 UBE2D2P62837 147 aa9.35□□□□□ -0.91
SLC38A1-202ENST00000439706 GAGE5Q13069 117 aa9.35□□□□□ -0.91
SLC38A1-202ENST00000439706 GAGE6Q13070 117 aa9.35□□□□□ -0.91
SLC38A1-202ENST00000439706 SUMO4Q6EEV6 95 aa9.35□□□□□ -0.91
SLC38A1-202ENST00000439706 FAM208BQ5VWN6 2430 aa9.35□□□□□ -0.91
SLC38A1-202ENST00000439706 TRAV8-3A0A0A6YYJ7 113 aa9.35□□□□□ -0.91
SLC38A1-202ENST00000439706 PIP4P1Q86T03 277 aa9.35□□□□□ -0.91
SLC38A1-202ENST00000439706 DUX3Q96PT4 197 aa9.35□□□□□ -0.91
SLC38A1-202ENST00000439706 RNASE3P12724 160 aaKnown RBP9.34□□□□□ -0.91
SLC38A1-202ENST00000439706 C9orf47Q6ZRZ4 202 aa9.34□□□□□ -0.91
SLC38A1-202ENST00000439706 PSMG3-AS1Q96PY0 264 aa9.34□□□□□ -0.91
SLC38A1-202ENST00000439706 GPHB5Q86YW7 130 aa9.34□□□□□ -0.91
SLC38A1-202ENST00000439706 Q8N1Y9 231 aa9.34□□□□□ -0.91
SLC38A1-202ENST00000439706 LY6G5BQ8NDX9 201 aa9.34□□□□□ -0.91
SLC38A1-202ENST00000439706 FAM110DQ8TAY7 271 aaPredicted RBP9.34□□□□□ -0.91
SLC38A1-202ENST00000439706 ZNF625Q96I27 306 aaPredicted RBP9.34□□□□□ -0.91
SLC38A1-202ENST00000439706 KNCNA6PVL3 124 aa9.33□□□□□ -0.92
SLC38A1-202ENST00000439706 CLEC2BQ92478 149 aa9.33□□□□□ -0.92
SLC38A1-202ENST00000439706 MDFICQ9P1T7 246 aa9.33□□□□□ -0.92
SLC38A1-202ENST00000439706 PRRC2AP48634 2157 aaKnown RBP9.33□□□□□ -0.92
SLC38A1-202ENST00000439706 ODF3BA8MYP8 253 aa9.33□□□□□ -0.92
SLC38A1-202ENST00000439706 C15orf53Q8NAA6 179 aa9.33□□□□□ -0.92
SLC38A1-202ENST00000439706 P0DMU3 169 aa9.33□□□□□ -0.92
SLC38A1-202ENST00000439706 FAM231AP0DMU4 169 aa9.33□□□□□ -0.92
SLC38A1-202ENST00000439706 FAM231CP0DMU5 169 aa9.33□□□□□ -0.92
SLC38A1-202ENST00000439706 SLC25A29Q8N8R3 303 aa9.33□□□□□ -0.92
SLC38A1-202ENST00000439706 ACACBO00763 2458 aa9.32□□□□□ -0.92
SLC38A1-202ENST00000439706 RNF223E7ERA6 249 aa9.32□□□□□ -0.92
SLC38A1-202ENST00000439706 SRSF2Q01130 221 aaKnown RBP9.32□□□□□ -0.92
SLC38A1-202ENST00000439706 DUX5Q96PT3 197 aa9.32□□□□□ -0.92
SLC38A1-202ENST00000439706 RHPN1-AS1Q9BWJ2 59 aa9.31□□□□□ -0.92
SLC38A1-202ENST00000439706 TRAV8-4A0A0B4J246 113 aa9.31□□□□□ -0.92
SLC38A1-202ENST00000439706 TRAV41A0A0B4J266 112 aa9.31□□□□□ -0.92
SLC38A1-202ENST00000439706 VCYO14598 125 aa9.31□□□□□ -0.92
SLC38A1-202ENST00000439706 EIF4EBP3O60516 100 aaPredicted RBP9.31□□□□□ -0.92
SLC38A1-202ENST00000439706 ZNF876PQ49A33 203 aa9.31□□□□□ -0.92
SLC38A1-202ENST00000439706 C2orf82Q6UX34 121 aa9.31□□□□□ -0.92
SLC38A1-202ENST00000439706 ATP6V0E2Q8NHE4 81 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms