RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 NXPH4O95158 308 aa13.45□□□□□ -0.26
SEMA3B-206ENST00000439487 CRYGDP07320 174 aa13.45□□□□□ -0.26
SEMA3B-206ENST00000439487 SRIP30626 198 aa13.45□□□□□ -0.26
SEMA3B-206ENST00000439487 FAM3BP58499 235 aaPredicted RBP13.45□□□□□ -0.26
SEMA3B-206ENST00000439487 PRADC1Q9BSG0 188 aa13.45□□□□□ -0.26
SEMA3B-206ENST00000439487 RPP21Q9H633 154 aaKnown RBP13.45□□□□□ -0.26
SEMA3B-206ENST00000439487 M0R2N4 97 aa13.44□□□□□ -0.26
SEMA3B-206ENST00000439487 RHOHQ15669 191 aa13.44□□□□□ -0.26
SEMA3B-206ENST00000439487 LINC01551Q86U37 167 aa13.44□□□□□ -0.26
SEMA3B-206ENST00000439487 ZNRF2Q8NHG8 242 aa13.44□□□□□ -0.26
SEMA3B-206ENST00000439487 SMDT1Q9H4I9 107 aa13.44□□□□□ -0.26
SEMA3B-206ENST00000439487 RHODO00212 210 aa13.43□□□□□ -0.26
SEMA3B-206ENST00000439487 GATCO43716 136 aaKnown RBP13.43□□□□□ -0.26
SEMA3B-206ENST00000439487 FAM74A3Q4VXF1 159 aa13.43□□□□□ -0.26
SEMA3B-206ENST00000439487 LYPD5Q6UWN5 251 aa13.43□□□□□ -0.26
SEMA3B-206ENST00000439487 FAM231DQ6ZW35 169 aa13.43□□□□□ -0.26
SEMA3B-206ENST00000439487 NEGR1Q7Z3B1 354 aa13.43□□□□□ -0.26
SEMA3B-206ENST00000439487 ERVFC1-1P60608 527 aa13.42□□□□□ -0.26
SEMA3B-206ENST00000439487 TMEM241Q24JQ0 296 aa13.42□□□□□ -0.26
SEMA3B-206ENST00000439487 LYZL1Q6UWQ5 148 aa13.42□□□□□ -0.26
SEMA3B-206ENST00000439487 C14orf178Q8N769 122 aaPredicted RBP13.42□□□□□ -0.26
SEMA3B-206ENST00000439487 MRPS16Q9Y3D3 137 aaKnown RBP13.42□□□□□ -0.26
SEMA3B-206ENST00000439487 DNAH2Q9P225 4427 aa13.42□□□□□ -0.26
SEMA3B-206ENST00000439487 CLLU1Q5K131 121 aa13.41□□□□□ -0.26
SEMA3B-206ENST00000439487 MSRB1Q9NZV6 116 aa13.41□□□□□ -0.26
SEMA3B-206ENST00000439487 A0A1W2PPQ1 181 aa13.4□□□□□ -0.26
SEMA3B-206ENST00000439487 F2Z2F3 143 aa13.4□□□□□ -0.26
SEMA3B-206ENST00000439487 CACNG7P62955 275 aa13.4□□□□□ -0.26
SEMA3B-206ENST00000439487 Q9UF83 564 aa13.4□□□□□ -0.26
SEMA3B-206ENST00000439487 FRAS1Q86XX4 4008 aa13.4□□□□□ -0.26
SEMA3B-206ENST00000439487 RPL23P62829 140 aaKnown RBP13.39□□□□□ -0.27
SEMA3B-206ENST00000439487 SOHLH1Q5JUK2 328 aa13.39□□□□□ -0.27
SEMA3B-206ENST00000439487 UPK3BQ9BT76 320 aa13.39□□□□□ -0.27
SEMA3B-206ENST00000439487 Q9H8V8 135 aa13.39□□□□□ -0.27
SEMA3B-206ENST00000439487 NAT8Q9UHE5 227 aa13.39□□□□□ -0.27
SEMA3B-206ENST00000439487 GAGE12JA6NER3 117 aa13.38□□□□□ -0.27
SEMA3B-206ENST00000439487 GAGE1Q13065 139 aa13.38□□□□□ -0.27
SEMA3B-206ENST00000439487 GAGE4Q13068 117 aa13.38□□□□□ -0.27
SEMA3B-206ENST00000439487 GAGE5Q13069 117 aa13.38□□□□□ -0.27
SEMA3B-206ENST00000439487 GAGE13Q4V321 117 aa13.38□□□□□ -0.27
SEMA3B-206ENST00000439487 SH2D6Q7Z4S9 175 aa13.38□□□□□ -0.27
SEMA3B-206ENST00000439487 GTSF1Q8WW33 167 aa13.38□□□□□ -0.27
SEMA3B-206ENST00000439487 OSTCQ9NRP0 149 aa13.38□□□□□ -0.27
SEMA3B-206ENST00000439487 DNAH17Q9UFH2 4485 aa13.37□□□□□ -0.27
SEMA3B-206ENST00000439487 A8MWL6 223 aa13.37□□□□□ -0.27
SEMA3B-206ENST00000439487 CTRLP40313 264 aa13.37□□□□□ -0.27
SEMA3B-206ENST00000439487 ADIRFQ15847 76 aa13.37□□□□□ -0.27
SEMA3B-206ENST00000439487 ZNF56Q15929 161 aa13.37□□□□□ -0.27
SEMA3B-206ENST00000439487 Q6ZR54 194 aa13.37□□□□□ -0.27
SEMA3B-206ENST00000439487 ISOC2Q96AB3 205 aa13.37□□□□□ -0.27
SEMA3B-206ENST00000439487 AP1S3Q96PC3 154 aa13.37□□□□□ -0.27
SEMA3B-206ENST00000439487 KIF25-AS1Q9Y6Z4 181 aa13.37□□□□□ -0.27
SEMA3B-206ENST00000439487 SMIM17P0DL12 118 aa13.36□□□□□ -0.27
SEMA3B-206ENST00000439487 NTF3P20783 257 aa13.36□□□□□ -0.27
SEMA3B-206ENST00000439487 WDR73Q6P4I2 378 aa13.36□□□□□ -0.27
SEMA3B-206ENST00000439487 NBDYA0A0U1RRE5 68 aa13.35□□□□□ -0.27
SEMA3B-206ENST00000439487 RAB4BP61018 213 aa13.35□□□□□ -0.27
SEMA3B-206ENST00000439487 CT83Q5H943 113 aa13.35□□□□□ -0.27
SEMA3B-206ENST00000439487 ATP6V0E2Q8NHE4 81 aa13.35□□□□□ -0.27
SEMA3B-206ENST00000439487 F5H697 171 aa13.34□□□□□ -0.27
SEMA3B-206ENST00000439487 LINC00694P0DN24 101 aa13.34□□□□□ -0.27
SEMA3B-206ENST00000439487 LINC00315P59091 139 aa13.34□□□□□ -0.27
SEMA3B-206ENST00000439487 TWIST1Q15672 202 aa13.34□□□□□ -0.27
SEMA3B-206ENST00000439487 C15orf54Q8N8G6 183 aa13.34□□□□□ -0.27
SEMA3B-206ENST00000439487 PGLYRP4Q96LB8 373 aa13.34□□□□□ -0.27
SEMA3B-206ENST00000439487 SIVA1O15304 175 aa13.33□□□□□ -0.28
SEMA3B-206ENST00000439487 MGPP08493 103 aa13.33□□□□□ -0.28
SEMA3B-206ENST00000439487 EVI2AP22794 236 aa13.33□□□□□ -0.28
SEMA3B-206ENST00000439487 OR10G8Q8NGN5 311 aa13.33□□□□□ -0.28
SEMA3B-206ENST00000439487 CNFNQ9BYD5 112 aa13.33□□□□□ -0.28
SEMA3B-206ENST00000439487 V9GYV3 84 aa13.33□□□□□ -0.28
SEMA3B-206ENST00000439487 TRGC1P0CF51 173 aa13.32□□□□□ -0.28
SEMA3B-206ENST00000439487 TIRAPP58753 221 aa13.32□□□□□ -0.28
SEMA3B-206ENST00000439487 TSKUQ8WUA8 353 aa13.32□□□□□ -0.28
SEMA3B-206ENST00000439487 GTSF1LQ9H1H1 148 aa13.32□□□□□ -0.28
SEMA3B-206ENST00000439487 TRBV10-1A0A0K0K1A3 114 aa13.31□□□□□ -0.28
SEMA3B-206ENST00000439487 FOXA3P55318 350 aaPredicted RBP13.31□□□□□ -0.28
SEMA3B-206ENST00000439487 WFDC10BQ8IUB3 73 aa13.31□□□□□ -0.28
SEMA3B-206ENST00000439487 HERC2O95714 4834 aa13.31□□□□□ -0.28
SEMA3B-206ENST00000439487 PCLOQ9Y6V0 5065 aa13.3□□□□□ -0.28
SEMA3B-206ENST00000439487 RPL36AP83881 106 aaKnown RBP13.3□□□□□ -0.28
SEMA3B-206ENST00000439487 RPL36ALQ969Q0 106 aaKnown RBP13.3□□□□□ -0.28
SEMA3B-206ENST00000439487 KRTAP1-5Q9BYS1 174 aa13.3□□□□□ -0.28
SEMA3B-206ENST00000439487 GFRA4Q9GZZ7 299 aa13.3□□□□□ -0.28
SEMA3B-206ENST00000439487 DPH3P1Q9H4G8 78 aa13.3□□□□□ -0.28
SEMA3B-206ENST00000439487 HIGD1CA8MV81 97 aa13.29□□□□□ -0.28
SEMA3B-206ENST00000439487 NEXN-AS1Q8NBZ9 246 aa13.29□□□□□ -0.28
SEMA3B-206ENST00000439487 FAT2Q9NYQ8 4349 aa13.28□□□□□ -0.28
SEMA3B-206ENST00000439487 TRBV7-3A0A075B6L6 115 aa13.28□□□□□ -0.28
SEMA3B-206ENST00000439487 FAM231BA6NCW3 169 aa13.28□□□□□ -0.28
SEMA3B-206ENST00000439487 LELP1Q5T871 98 aa13.28□□□□□ -0.28
SEMA3B-206ENST00000439487 SUMO4Q6EEV6 95 aa13.28□□□□□ -0.28
SEMA3B-206ENST00000439487 RTL8CO15255 209 aa13.27□□□□□ -0.29
SEMA3B-206ENST00000439487 UBE2D3P61077 147 aa13.27□□□□□ -0.29
SEMA3B-206ENST00000439487 UBE2D2P62837 147 aa13.27□□□□□ -0.29
SEMA3B-206ENST00000439487 TTC32Q5I0X7 151 aa13.27□□□□□ -0.29
SEMA3B-206ENST00000439487 OR10J3Q5JRS4 329 aa13.27□□□□□ -0.29
SEMA3B-206ENST00000439487 C1orf134Q5TEV5 83 aa13.27□□□□□ -0.29
SEMA3B-206ENST00000439487 BORCS7Q96B45 105 aa13.27□□□□□ -0.29
SEMA3B-206ENST00000439487 TRAV8-6A0A0B4J262 113 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms