RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 NUDT3O95989 172 aa6.47□□□□□ -1.37
AC011228.1-201ENST00000439027 ASIPP42127 132 aa6.47□□□□□ -1.37
AC011228.1-201ENST00000439027 TDRG1Q3Y452 100 aa6.47□□□□□ -1.37
AC011228.1-201ENST00000439027 ZNF575Q86XF7 245 aa6.47□□□□□ -1.37
AC011228.1-201ENST00000439027 C15orf53Q8NAA6 179 aa6.47□□□□□ -1.37
AC011228.1-201ENST00000439027 PYGO2Q9BRQ0 406 aa6.47□□□□□ -1.37
AC011228.1-201ENST00000439027 TMEM242Q9NWH2 141 aa6.47□□□□□ -1.37
AC011228.1-201ENST00000439027 IL36BQ9NZH7 164 aa6.47□□□□□ -1.37
AC011228.1-201ENST00000439027 TIMM8BQ9Y5J9 83 aaPredicted RBP6.47□□□□□ -1.37
AC011228.1-201ENST00000439027 URGCP-MRPS24S4R325 110 aa6.47□□□□□ -1.37
AC011228.1-201ENST00000439027 NACAE9PAV3 2078 aa6.46□□□□□ -1.37
AC011228.1-201ENST00000439027 SMIM27A0A1W2PRY6 76 aa6.46□□□□□ -1.38
AC011228.1-201ENST00000439027 HIGD1CA8MV81 97 aa6.46□□□□□ -1.38
AC011228.1-201ENST00000439027 TYMSP04818 313 aa6.46□□□□□ -1.38
AC011228.1-201ENST00000439027 AZU1P20160 251 aa6.46□□□□□ -1.38
AC011228.1-201ENST00000439027 S100PP25815 95 aa6.46□□□□□ -1.38
AC011228.1-201ENST00000439027 S100A4P26447 101 aaKnown RBP6.46□□□□□ -1.38
AC011228.1-201ENST00000439027 FAM3BP58499 235 aaPredicted RBP6.46□□□□□ -1.38
AC011228.1-201ENST00000439027 CBLN2Q8IUK8 224 aa6.46□□□□□ -1.38
AC011228.1-201ENST00000439027 FER1L6-AS1Q8NA97 138 aa6.46□□□□□ -1.38
AC011228.1-201ENST00000439027 GTSF1Q8WW33 167 aa6.46□□□□□ -1.38
AC011228.1-201ENST00000439027 PGLYRP4Q96LB8 373 aa6.46□□□□□ -1.38
AC011228.1-201ENST00000439027 LINC00467Q9BRT7 94 aa6.46□□□□□ -1.38
AC011228.1-201ENST00000439027 TPPP3Q9BW30 176 aa6.46□□□□□ -1.38
AC011228.1-201ENST00000439027 SMCO4Q9NRQ5 59 aa6.46□□□□□ -1.38
AC011228.1-201ENST00000439027 TRGV11A0A075B6L2 103 aa6.45□□□□□ -1.38
AC011228.1-201ENST00000439027 IGHV3-16A0A0C4DH30 117 aa6.45□□□□□ -1.38
AC011228.1-201ENST00000439027 MUC21A0A0G2JKD1 596 aa6.45□□□□□ -1.38
AC011228.1-201ENST00000439027 MUC21A0A140T8X8 626 aa6.45□□□□□ -1.38
AC011228.1-201ENST00000439027 FAM231BA6NCW3 169 aa6.45□□□□□ -1.38
AC011228.1-201ENST00000439027 H3BVH4 76 aa6.45□□□□□ -1.38
AC011228.1-201ENST00000439027 CXCL1P09341 107 aa6.45□□□□□ -1.38
AC011228.1-201ENST00000439027 ARMS2P0C7Q2 107 aa6.45□□□□□ -1.38
AC011228.1-201ENST00000439027 KCNIP4Q6PIL6 250 aa6.45□□□□□ -1.38
AC011228.1-201ENST00000439027 LYZL1Q6UWQ5 148 aa6.45□□□□□ -1.38
AC011228.1-201ENST00000439027 NUP35Q8NFH5 326 aa6.45□□□□□ -1.38
AC011228.1-201ENST00000439027 IMMP2LQ96T52 175 aa6.45□□□□□ -1.38
AC011228.1-201ENST00000439027 GFRA4Q9GZZ7 299 aa6.45□□□□□ -1.38
AC011228.1-201ENST00000439027 MDFICQ9P1T7 246 aa6.45□□□□□ -1.38
AC011228.1-201ENST00000439027 NAT8BQ9UHF3 227 aa6.45□□□□□ -1.38
AC011228.1-201ENST00000439027 ABCA13Q86UQ4 5058 aa6.44□□□□□ -1.38
AC011228.1-201ENST00000439027 A0A1W2PPQ1 181 aa6.44□□□□□ -1.38
AC011228.1-201ENST00000439027 SPINK4O60575 86 aa6.44□□□□□ -1.38
AC011228.1-201ENST00000439027 ATP5G1P05496 136 aa6.44□□□□□ -1.38
AC011228.1-201ENST00000439027 IGLC6P0CF74 106 aa6.44□□□□□ -1.38
AC011228.1-201ENST00000439027 FOXA3P55318 350 aaPredicted RBP6.44□□□□□ -1.38
AC011228.1-201ENST00000439027 SSTP61278 116 aa6.44□□□□□ -1.38
AC011228.1-201ENST00000439027 DNLZQ5SXM8 178 aa6.44□□□□□ -1.38
AC011228.1-201ENST00000439027 GSN-AS1Q9NRJ2 163 aa6.44□□□□□ -1.38
AC011228.1-201ENST00000439027 TGIF2-C20orf24A0A0A6YYL0 155 aa6.43□□□□□ -1.38
AC011228.1-201ENST00000439027 KRTAP4-8A0A0G2JLE6 195 aa6.43□□□□□ -1.38
AC011228.1-201ENST00000439027 NBDYA0A0U1RRE5 68 aa6.43□□□□□ -1.38
AC011228.1-201ENST00000439027 F2Z2F3 143 aa6.43□□□□□ -1.38
AC011228.1-201ENST00000439027 OR5AL1P0C617 328 aa6.43□□□□□ -1.38
AC011228.1-201ENST00000439027 RNASE3P12724 160 aaKnown RBP6.43□□□□□ -1.38
AC011228.1-201ENST00000439027 CCL18P55774 89 aa6.43□□□□□ -1.38
AC011228.1-201ENST00000439027 ZNF415Q09FC8 603 aa6.43□□□□□ -1.38
AC011228.1-201ENST00000439027 ELOBQ15370 118 aa6.43□□□□□ -1.38
AC011228.1-201ENST00000439027 ZNF493Q6ZR52 646 aa6.43□□□□□ -1.38
AC011228.1-201ENST00000439027 SVIPQ8NHG7 77 aa6.43□□□□□ -1.38
AC011228.1-201ENST00000439027 C16orf74Q96GX8 76 aa6.43□□□□□ -1.38
AC011228.1-201ENST00000439027 BTF3L4Q96K17 158 aa6.43□□□□□ -1.38
AC011228.1-201ENST00000439027 NOP10Q9NPE3 64 aaKnown RBP6.43□□□□□ -1.38
AC011228.1-201ENST00000439027 A0A1B0GUT8 65 aa6.42□□□□□ -1.38
AC011228.1-201ENST00000439027 PLAC8L1A1L4L8 177 aa6.42□□□□□ -1.38
AC011228.1-201ENST00000439027 SNURFLB1AK76 121 aa6.42□□□□□ -1.38
AC011228.1-201ENST00000439027 SNAI2O43623 268 aa6.42□□□□□ -1.38
AC011228.1-201ENST00000439027 CTRLP40313 264 aa6.42□□□□□ -1.38
AC011228.1-201ENST00000439027 SPANXN1Q5VSR9 72 aa6.42□□□□□ -1.38
AC011228.1-201ENST00000439027 MRPL54Q6P161 138 aaKnown RBP6.42□□□□□ -1.38
AC011228.1-201ENST00000439027 C6orf223Q8N319 242 aa6.42□□□□□ -1.38
AC011228.1-201ENST00000439027 C11orf72Q8NBR9 251 aa6.42□□□□□ -1.38
AC011228.1-201ENST00000439027 OR10AG1Q8NH19 301 aa6.42□□□□□ -1.38
AC011228.1-201ENST00000439027 ZNRF2Q8NHG8 242 aa6.42□□□□□ -1.38
AC011228.1-201ENST00000439027 RNASE8Q8TDE3 154 aaKnown RBP6.42□□□□□ -1.38
AC011228.1-201ENST00000439027 TMEM263Q8WUH6 116 aaKnown RBP6.42□□□□□ -1.38
AC011228.1-201ENST00000439027 BORCS7Q96B45 105 aa6.42□□□□□ -1.38
AC011228.1-201ENST00000439027 C9orf85Q96MD7 179 aa6.42□□□□□ -1.38
AC011228.1-201ENST00000439027 YPEL4Q96NS1 127 aa6.42□□□□□ -1.38
AC011228.1-201ENST00000439027 SCRT2Q9NQ03 307 aa6.42□□□□□ -1.38
AC011228.1-201ENST00000439027 PHLDA3Q9Y5J5 127 aa6.42□□□□□ -1.38
AC011228.1-201ENST00000439027 TRAV9-1A0A075B6T8 112 aa6.41□□□□□ -1.38
AC011228.1-201ENST00000439027 C16orf90A8MZG2 172 aa6.41□□□□□ -1.38
AC011228.1-201ENST00000439027 M0R381 172 aa6.41□□□□□ -1.38
AC011228.1-201ENST00000439027 NTF3P20783 257 aa6.41□□□□□ -1.38
AC011228.1-201ENST00000439027 CACNG7P62955 275 aa6.41□□□□□ -1.38
AC011228.1-201ENST00000439027 RIGQ13278 110 aa6.41□□□□□ -1.38
AC011228.1-201ENST00000439027 TWIST1Q15672 202 aa6.41□□□□□ -1.38
AC011228.1-201ENST00000439027 SPXQ9BT56 116 aa6.41□□□□□ -1.38
AC011228.1-201ENST00000439027 MSRB1Q9NZV6 116 aa6.41□□□□□ -1.38
AC011228.1-201ENST00000439027 LINC00588Q9Y4M8 146 aa6.41□□□□□ -1.38
AC011228.1-201ENST00000439027 TRBV24-1A0A075B6N3 115 aa6.4□□□□□ -1.38
AC011228.1-201ENST00000439027 A0A0J9YY99 117 aa6.4□□□□□ -1.38
AC011228.1-201ENST00000439027 COLCA2A8K830 154 aa6.4□□□□□ -1.38
AC011228.1-201ENST00000439027 M0R2P5 195 aa6.4□□□□□ -1.38
AC011228.1-201ENST00000439027 CAMPP49913 170 aa6.4□□□□□ -1.38
AC011228.1-201ENST00000439027 ZNF876PQ49A33 203 aa6.4□□□□□ -1.38
AC011228.1-201ENST00000439027 WDR73Q6P4I2 378 aa6.4□□□□□ -1.38
AC011228.1-201ENST00000439027 ZFP82Q8N141 532 aa6.4□□□□□ -1.38
AC011228.1-201ENST00000439027 SYT8Q8NBV8 401 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms