RNA–Protein interactions for RNA: ENST00000430321.5

UBR3-204, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-204ENST00000430321 HIST1H2BJP06899 126 aa4.47□□□□□ -1.69
UBR3-204ENST00000430321 HIST1H2BOP23527 126 aa4.47□□□□□ -1.69
UBR3-204ENST00000430321 HIST1H2BBP33778 126 aa4.47□□□□□ -1.69
UBR3-204ENST00000430321 HIST1H2BDP58876 126 aa4.47□□□□□ -1.69
UBR3-204ENST00000430321 HIST1H2BCP62807 126 aa4.47□□□□□ -1.69
UBR3-204ENST00000430321 HIST2H2BEQ16778 126 aa4.47□□□□□ -1.69
UBR3-204ENST00000430321 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.47□□□□□ -1.69
UBR3-204ENST00000430321 Q8N6K4 173 aa4.47□□□□□ -1.69
UBR3-204ENST00000430321 ZFAND2AQ8N6M9 145 aa4.47□□□□□ -1.69
UBR3-204ENST00000430321 HIST1H2BHQ93079 126 aa4.47□□□□□ -1.69
UBR3-204ENST00000430321 HIST1H2BNQ99877 126 aa4.47□□□□□ -1.69
UBR3-204ENST00000430321 HIST1H2BMQ99879 126 aa4.47□□□□□ -1.69
UBR3-204ENST00000430321 C2orf16Q68DN1 1984 aa4.47□□□□□ -1.69
UBR3-204ENST00000430321 NUP210LQ5VU65 1888 aa4.47□□□□□ -1.69
UBR3-204ENST00000430321 IGHV4-28A0A0C4DH34 117 aa4.47□□□□□ -1.69
UBR3-204ENST00000430321 SYCNQ0VAF6 134 aa4.47□□□□□ -1.69
UBR3-204ENST00000430321 NCKAP5O14513 1909 aa4.47□□□□□ -1.69
UBR3-204ENST00000430321 CRYGBP07316 175 aa4.47□□□□□ -1.69
UBR3-204ENST00000430321 C3orf79P0CE67 100 aa4.47□□□□□ -1.69
UBR3-204ENST00000430321 C5orf38Q86SI9 138 aa4.47□□□□□ -1.69
UBR3-204ENST00000430321 GTSF1Q8WW33 167 aa4.47□□□□□ -1.69
UBR3-204ENST00000430321 IGLC2P0DOY2 106 aa4.46□□□□□ -1.69
UBR3-204ENST00000430321 RPL28P46779 137 aaKnown RBP4.46□□□□□ -1.69
UBR3-204ENST00000430321 LINC00205P59089 165 aa4.46□□□□□ -1.69
UBR3-204ENST00000430321 C1orf134Q5TEV5 83 aa4.46□□□□□ -1.69
UBR3-204ENST00000430321 CACNA1CQ13936 2221 aa4.46□□□□□ -1.7
UBR3-204ENST00000430321 TMEM256-PLSCR3K7ERE1 68 aa4.46□□□□□ -1.7
UBR3-204ENST00000430321 HIST3H2BBQ8N257 126 aa4.46□□□□□ -1.7
UBR3-204ENST00000430321 SPTSSBQ8NFR3 76 aa4.46□□□□□ -1.7
UBR3-204ENST00000430321 C17orf77Q96MU5 243 aa4.46□□□□□ -1.7
UBR3-204ENST00000430321 LINC00467Q9BRT7 94 aa4.46□□□□□ -1.7
UBR3-204ENST00000430321 PLXND1Q9Y4D7 1925 aa4.46□□□□□ -1.7
UBR3-204ENST00000430321 SPATA12Q7Z6I5 190 aa4.46□□□□□ -1.7
UBR3-204ENST00000430321 PPDPFLQ8WWR9 84 aa4.46□□□□□ -1.7
UBR3-204ENST00000430321 CDPF1Q6NVV7 123 aa4.45□□□□□ -1.7
UBR3-204ENST00000430321 ANKRD29Q8N6D5 301 aa4.45□□□□□ -1.7
UBR3-204ENST00000430321 SIGMAR1Q99720 223 aa4.45□□□□□ -1.7
UBR3-204ENST00000430321 MSRB1Q9NZV6 116 aa4.45□□□□□ -1.7
UBR3-204ENST00000430321 ZNF581Q9P0T4 197 aa4.45□□□□□ -1.7
UBR3-204ENST00000430321 UBE2D4Q9Y2X8 147 aa4.45□□□□□ -1.7
UBR3-204ENST00000430321 IGKV2D-26A0A0A0MRZ7 120 aa4.45□□□□□ -1.7
UBR3-204ENST00000430321 C9JAW5 83 aa4.45□□□□□ -1.7
UBR3-204ENST00000430321 COX17Q14061 63 aa4.45□□□□□ -1.7
UBR3-204ENST00000430321 NREPQ16612 68 aa4.45□□□□□ -1.7
UBR3-204ENST00000430321 SPRNQ5BIV9 151 aa4.45□□□□□ -1.7
UBR3-204ENST00000430321 UPK3BQ9BT76 320 aa4.45□□□□□ -1.7
UBR3-204ENST00000430321 CNTRLQ7Z7A1 2325 aa4.45□□□□□ -1.7
UBR3-204ENST00000430321 ARHGEF17Q96PE2 2063 aaPredicted RBP4.45□□□□□ -1.7
UBR3-204ENST00000430321 COL4A3Q01955 1670 aa4.45□□□□□ -1.7
UBR3-204ENST00000430321 SNAI2O43623 268 aa4.45□□□□□ -1.7
UBR3-204ENST00000430321 COX8AP10176 69 aa4.45□□□□□ -1.7
UBR3-204ENST00000430321 C20orf203Q8NBC4 194 aa4.45□□□□□ -1.7
UBR3-204ENST00000430321 DOCK8Q8NF50 2099 aa4.45□□□□□ -1.7
UBR3-204ENST00000430321 A0A087WZ39 114 aa4.45□□□□□ -1.7
UBR3-204ENST00000430321 IBA57-AS1B1ANH7 110 aa4.45□□□□□ -1.7
UBR3-204ENST00000430321 KPRPQ5T749 579 aaPredicted RBP4.45□□□□□ -1.7
UBR3-204ENST00000430321 CEND1Q8N111 149 aa4.45□□□□□ -1.7
UBR3-204ENST00000430321 CHCHD10Q8WYQ3 142 aaPredicted RBP4.45□□□□□ -1.7
UBR3-204ENST00000430321 ZNF625Q96I27 306 aaPredicted RBP4.45□□□□□ -1.7
UBR3-204ENST00000430321 KIF26AQ9ULI4 1882 aaPredicted RBP4.44□□□□□ -1.7
UBR3-204ENST00000430321 F8W1H4 67 aa4.44□□□□□ -1.7
UBR3-204ENST00000430321 CD300CQ08708 224 aa4.44□□□□□ -1.7
UBR3-204ENST00000430321 HIGD2BQ4VC39 106 aa4.44□□□□□ -1.7
UBR3-204ENST00000430321 HIST1H2BLQ99880 126 aa4.44□□□□□ -1.7
UBR3-204ENST00000430321 SPANXB1Q9NS25 103 aaPredicted RBP4.44□□□□□ -1.7
UBR3-204ENST00000430321 A0A1B0GX51 115 aa4.44□□□□□ -1.7
UBR3-204ENST00000430321 PTH2Q96A98 100 aa4.44□□□□□ -1.7
UBR3-204ENST00000430321 TRAV26-2A0A0B4J265 109 aa4.44□□□□□ -1.7
UBR3-204ENST00000430321 CFC1BP0CG36 223 aa4.44□□□□□ -1.7
UBR3-204ENST00000430321 CFC1P0CG37 223 aa4.44□□□□□ -1.7
UBR3-204ENST00000430321 HAMPP81172 84 aa4.44□□□□□ -1.7
UBR3-204ENST00000430321 ANAPC13Q9BS18 74 aa4.44□□□□□ -1.7
UBR3-204ENST00000430321 MRPL35Q9NZE8 188 aaKnown RBP4.44□□□□□ -1.7
UBR3-204ENST00000430321 FER1L5A0AVI2 2057 aa4.44□□□□□ -1.7
UBR3-204ENST00000430321 TRBV6-8A0A0A6YYG3 113 aa4.44□□□□□ -1.7
UBR3-204ENST00000430321 FAM19A1Q7Z5A9 133 aa4.44□□□□□ -1.7
UBR3-204ENST00000430321 E7EUB6 86 aa4.43□□□□□ -1.7
UBR3-204ENST00000430321 PI4KAP42356 2102 aa4.43□□□□□ -1.7
UBR3-204ENST00000430321 CD164L2Q6UWJ8 174 aa4.43□□□□□ -1.7
UBR3-204ENST00000430321 ZNF106Q9H2Y7 1883 aaKnown RBP4.43□□□□□ -1.7
UBR3-204ENST00000430321 IGLV1-51P01701 117 aa4.43□□□□□ -1.7
UBR3-204ENST00000430321 UBE2D3P61077 147 aa4.43□□□□□ -1.7
UBR3-204ENST00000430321 DEFB105AQ8NG35 78 aa4.43□□□□□ -1.7
UBR3-204ENST00000430321 IGLV10-54A0A075B6I4 117 aa4.43□□□□□ -1.7
UBR3-204ENST00000430321 IGLV5-52A0A0A0MRZ9 124 aa4.43□□□□□ -1.7
UBR3-204ENST00000430321 TRBV30A0A0K0K1B3 111 aa4.43□□□□□ -1.7
UBR3-204ENST00000430321 M0R378 163 aa4.43□□□□□ -1.7
UBR3-204ENST00000430321 TMEM258P61165 79 aa4.43□□□□□ -1.7
UBR3-204ENST00000430321 FHL3Q13643 280 aa4.43□□□□□ -1.7
UBR3-204ENST00000430321 LINC01561Q8N1V8 128 aa4.43□□□□□ -1.7
UBR3-204ENST00000430321 WIPF3A6NGB9 483 aa4.43□□□□□ -1.7
UBR3-204ENST00000430321 IGHV4-30-4P0DP06 118 aa4.43□□□□□ -1.7
UBR3-204ENST00000430321 PYGO1Q9Y3Y4 419 aa4.43□□□□□ -1.7
UBR3-204ENST00000430321 NUP214P35658 2090 aaPredicted RBP4.42□□□□□ -1.7
UBR3-204ENST00000430321 NAA38Q9BRA0 125 aaKnown RBP4.42□□□□□ -1.7
UBR3-204ENST00000430321 ZDBF2Q9HCK1 2354 aa4.42□□□□□ -1.7
UBR3-204ENST00000430321 MUC22E2RYF6 1773 aaPredicted RBP4.42□□□□□ -1.7
UBR3-204ENST00000430321 A0A1B0GV90 55 aa4.42□□□□□ -1.7
UBR3-204ENST00000430321 LIMD2Q9BT23 127 aa4.42□□□□□ -1.7
UBR3-204ENST00000430321 HIGD1BQ9P298 99 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms