RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 RBM3P98179 157 aaKnown RBP9.87□□□□□ -0.83
LDB3-205ENST00000429277 VSIG2Q96IQ7 327 aa9.87□□□□□ -0.83
LDB3-205ENST00000429277 FAM167A-AS1Q96KT0 104 aa9.87□□□□□ -0.83
LDB3-205ENST00000429277 NUP210Q8TEM1 1887 aaPredicted RBP9.87□□□□□ -0.83
LDB3-205ENST00000429277 A0A0B4J2C4 111 aa9.86□□□□□ -0.83
LDB3-205ENST00000429277 C11orf86A6NJI1 115 aa9.86□□□□□ -0.83
LDB3-205ENST00000429277 PDE6GP18545 87 aa9.86□□□□□ -0.83
LDB3-205ENST00000429277 LYPD6Q86Y78 171 aa9.86□□□□□ -0.83
LDB3-205ENST00000429277 SPRNQ5BIV9 151 aa9.86□□□□□ -0.83
LDB3-205ENST00000429277 MUSTN1Q8IVN3 82 aa9.86□□□□□ -0.83
LDB3-205ENST00000429277 SMIM20Q8N5G0 67 aa9.86□□□□□ -0.83
LDB3-205ENST00000429277 SMAD5-AS1Q9Y6J3 95 aa9.86□□□□□ -0.83
LDB3-205ENST00000429277 TMEM263Q8WUH6 116 aaKnown RBP9.85□□□□□ -0.83
LDB3-205ENST00000429277 SIRPDQ9H106 197 aa9.85□□□□□ -0.83
LDB3-205ENST00000429277 HELZP42694 1942 aaKnown RBP9.85□□□□□ -0.83
LDB3-205ENST00000429277 EML6Q6ZMW3 1958 aa9.85□□□□□ -0.83
LDB3-205ENST00000429277 A4D1N5 150 aa9.85□□□□□ -0.83
LDB3-205ENST00000429277 E9PLD3 99 aa9.85□□□□□ -0.83
LDB3-205ENST00000429277 F8W735 103 aaPredicted RBP9.85□□□□□ -0.83
LDB3-205ENST00000429277 IGHV3-30P01768 117 aa9.85□□□□□ -0.83
LDB3-205ENST00000429277 IGHV3-33P01772 117 aa9.85□□□□□ -0.83
LDB3-205ENST00000429277 IGHV3-30-3P0DP02 117 aa9.85□□□□□ -0.83
LDB3-205ENST00000429277 IGHV3-30-5P0DP03 117 aa9.85□□□□□ -0.83
LDB3-205ENST00000429277 NREPQ16612 68 aa9.85□□□□□ -0.83
LDB3-205ENST00000429277 ATOX1O00244 68 aa9.85□□□□□ -0.83
LDB3-205ENST00000429277 UBE2AP49459 152 aa9.85□□□□□ -0.83
LDB3-205ENST00000429277 C14orf177Q52M58 125 aa9.85□□□□□ -0.83
LDB3-205ENST00000429277 LRRC75A-AS1Q8N1F1 130 aa9.84□□□□□ -0.83
LDB3-205ENST00000429277 PRO0255Q9UI72 69 aa9.84□□□□□ -0.83
LDB3-205ENST00000429277 Q8N7P7 452 aa9.84□□□□□ -0.83
LDB3-205ENST00000429277 SPRY4Q9C004 299 aa9.84□□□□□ -0.83
LDB3-205ENST00000429277 ODF3Q96PU9 254 aa9.84□□□□□ -0.83
LDB3-205ENST00000429277 PCNX1Q96RV3 2341 aa9.84□□□□□ -0.83
LDB3-205ENST00000429277 IGLV10-54A0A075B6I4 117 aa9.83□□□□□ -0.84
LDB3-205ENST00000429277 A0A1B0GX51 115 aa9.83□□□□□ -0.84
LDB3-205ENST00000429277 LOXL1Q08397 574 aaPredicted RBP9.83□□□□□ -0.84
LDB3-205ENST00000429277 SPAG11BQ08648 103 aa9.83□□□□□ -0.84
LDB3-205ENST00000429277 LINC01620Q4KN68 170 aa9.83□□□□□ -0.84
LDB3-205ENST00000429277 C4orf48Q5BLP8 95 aa9.83□□□□□ -0.84
LDB3-205ENST00000429277 DIRC1Q969H9 104 aa9.83□□□□□ -0.84
LDB3-205ENST00000429277 RITA1Q96K30 269 aa9.83□□□□□ -0.84
LDB3-205ENST00000429277 ANAPC1Q9H1A4 1944 aa9.83□□□□□ -0.84
LDB3-205ENST00000429277 A6NDX4 124 aa9.83□□□□□ -0.84
LDB3-205ENST00000429277 ASPHD1Q5U4P2 390 aa9.83□□□□□ -0.84
LDB3-205ENST00000429277 MSRB1Q9NZV6 116 aa9.83□□□□□ -0.84
LDB3-205ENST00000429277 H3BT86 120 aa9.83□□□□□ -0.84
LDB3-205ENST00000429277 CCL25O15444 150 aa9.83□□□□□ -0.84
LDB3-205ENST00000429277 TEN1Q86WV5 123 aa9.83□□□□□ -0.84
LDB3-205ENST00000429277 BAALCQ8WXS3 180 aa9.83□□□□□ -0.84
LDB3-205ENST00000429277 A0A0J9YX75 114 aa9.82□□□□□ -0.84
LDB3-205ENST00000429277 CHKB-CPT1BH3BT56 60 aa9.82□□□□□ -0.84
LDB3-205ENST00000429277 TNFRSF13BO14836 293 aaPredicted RBP9.82□□□□□ -0.84
LDB3-205ENST00000429277 MYLKQ15746 1914 aa9.82□□□□□ -0.84
LDB3-205ENST00000429277 FRMPD3Q5JV73 1810 aa9.82□□□□□ -0.84
LDB3-205ENST00000429277 CITED2Q99967 270 aaPredicted RBP9.82□□□□□ -0.84
LDB3-205ENST00000429277 ANKRD39Q53RE8 183 aa9.81□□□□□ -0.84
LDB3-205ENST00000429277 FSTL3O95633 263 aa9.81□□□□□ -0.84
LDB3-205ENST00000429277 ODF3L1Q8IXM7 274 aa9.81□□□□□ -0.84
LDB3-205ENST00000429277 GTSF1Q8WW33 167 aa9.81□□□□□ -0.84
LDB3-205ENST00000429277 IGHV1-58A0A0C4DH39 117 aa9.81□□□□□ -0.84
LDB3-205ENST00000429277 SEM1Q6ZVN7 128 aa9.81□□□□□ -0.84
LDB3-205ENST00000429277 KMT2EQ8IZD2 1858 aa9.81□□□□□ -0.84
LDB3-205ENST00000429277 ZFP36P26651 326 aaKnown RBP9.81□□□□□ -0.84
LDB3-205ENST00000429277 C20orf203Q8NBC4 194 aa9.81□□□□□ -0.84
LDB3-205ENST00000429277 PRAC2D3DTV9 90 aa9.8□□□□□ -0.84
LDB3-205ENST00000429277 TMEM256-PLSCR3K7ERE1 68 aa9.8□□□□□ -0.84
LDB3-205ENST00000429277 PSMB8P28062 276 aa9.8□□□□□ -0.84
LDB3-205ENST00000429277 ZGRF1Q86YA3 2104 aa9.8□□□□□ -0.84
LDB3-205ENST00000429277 PLXND1Q9Y4D7 1925 aa9.8□□□□□ -0.84
LDB3-205ENST00000429277 IGHV4-4A0A075B6R2 117 aa9.8□□□□□ -0.84
LDB3-205ENST00000429277 SMIM9A6NGZ8 99 aa9.79□□□□□ -0.84
LDB3-205ENST00000429277 LINC00574Q9H8X3 128 aa9.79□□□□□ -0.84
LDB3-205ENST00000429277 HIGD2BQ4VC39 106 aa9.79□□□□□ -0.84
LDB3-205ENST00000429277 DEFB135Q30KP9 77 aa9.79□□□□□ -0.84
LDB3-205ENST00000429277 NACAE9PAV3 2078 aa9.79□□□□□ -0.84
LDB3-205ENST00000429277 TRBV10-2A0A0K0K1G8 114 aa9.79□□□□□ -0.84
LDB3-205ENST00000429277 NDUFA11Q86Y39 141 aa9.79□□□□□ -0.84
LDB3-205ENST00000429277 NCKAP5O14513 1909 aa9.79□□□□□ -0.84
LDB3-205ENST00000429277 SPRY2O43597 315 aa9.78□□□□□ -0.84
LDB3-205ENST00000429277 RPL39P62891 51 aaKnown RBP9.78□□□□□ -0.84
LDB3-205ENST00000429277 FANCD2OSQ96PS1 177 aa9.78□□□□□ -0.84
LDB3-205ENST00000429277 TMEM61Q8N0U2 210 aa9.78□□□□□ -0.84
LDB3-205ENST00000429277 C19orf71A6NCJ1 209 aa9.78□□□□□ -0.84
LDB3-205ENST00000429277 LGALS9O00182 355 aa9.78□□□□□ -0.84
LDB3-205ENST00000429277 MED13Q9UHV7 2174 aa9.78□□□□□ -0.84
LDB3-205ENST00000429277 PCNX2A6NKB5 2137 aa9.77□□□□□ -0.84
LDB3-205ENST00000429277 H7C423 109 aa9.77□□□□□ -0.85
LDB3-205ENST00000429277 MDFICQ9P1T7 246 aa9.77□□□□□ -0.85
LDB3-205ENST00000429277 KLK12Q9UKR0 248 aa9.77□□□□□ -0.85
LDB3-205ENST00000429277 B9D2Q9BPU9 175 aa9.77□□□□□ -0.85
LDB3-205ENST00000429277 UFSP1Q6NVU6 142 aa9.77□□□□□ -0.85
LDB3-205ENST00000429277 MAP6D1Q9H9H5 199 aa9.77□□□□□ -0.85
LDB3-205ENST00000429277 SHANK1Q9Y566 2161 aa9.76□□□□□ -0.85
LDB3-205ENST00000429277 ODF3BA8MYP8 253 aa9.76□□□□□ -0.85
LDB3-205ENST00000429277 LECT2O14960 151 aa9.76□□□□□ -0.85
LDB3-205ENST00000429277 LYRM9A8MSI8 78 aa9.76□□□□□ -0.85
LDB3-205ENST00000429277 ODF1Q14990 250 aa9.76□□□□□ -0.85
LDB3-205ENST00000429277 NCR3O14931 201 aa9.75□□□□□ -0.85
LDB3-205ENST00000429277 MIR7-3HGQ8N6C7 128 aa9.75□□□□□ -0.85
LDB3-205ENST00000429277 IGLV2-14P01704 120 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms