RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 GNG13Q9P2W3 67 aa7.27□□□□□ -1.25
LINC01238-202ENST00000426962 LRP1BQ9NZR2 4599 aa7.27□□□□□ -1.25
LINC01238-202ENST00000426962 A0A087WWL8 130 aa7.26□□□□□ -1.25
LINC01238-202ENST00000426962 IBA57-AS1B1ANH7 110 aa7.26□□□□□ -1.25
LINC01238-202ENST00000426962 M0R381 172 aa7.26□□□□□ -1.25
LINC01238-202ENST00000426962 CXCL1P09341 107 aa7.26□□□□□ -1.25
LINC01238-202ENST00000426962 RPL35P42766 123 aaKnown RBP7.26□□□□□ -1.25
LINC01238-202ENST00000426962 FAM74A4Q5TZK3 123 aa7.26□□□□□ -1.25
LINC01238-202ENST00000426962 C14orf178Q8N769 122 aaPredicted RBP7.26□□□□□ -1.25
LINC01238-202ENST00000426962 Q9UF83 564 aa7.26□□□□□ -1.25
LINC01238-202ENST00000426962 A0A087WTM6 91 aa7.25□□□□□ -1.25
LINC01238-202ENST00000426962 A0A087WWC5 75 aa7.25□□□□□ -1.25
LINC01238-202ENST00000426962 LINC00694P0DN24 101 aa7.25□□□□□ -1.25
LINC01238-202ENST00000426962 RPL19P84098 196 aaKnown RBP7.25□□□□□ -1.25
LINC01238-202ENST00000426962 PRR27Q6MZM9 219 aa7.25□□□□□ -1.25
LINC01238-202ENST00000426962 C11orf52Q96A22 123 aa7.25□□□□□ -1.25
LINC01238-202ENST00000426962 SSBP4Q9BWG4 385 aaPredicted RBP7.25□□□□□ -1.25
LINC01238-202ENST00000426962 KRTAP17-1Q9BYP8 105 aa7.25□□□□□ -1.25
LINC01238-202ENST00000426962 SNAI2O43623 268 aa7.24□□□□□ -1.25
LINC01238-202ENST00000426962 IGHV3-30P01768 117 aa7.24□□□□□ -1.25
LINC01238-202ENST00000426962 IGHV3-33P01772 117 aa7.24□□□□□ -1.25
LINC01238-202ENST00000426962 IGHV3-30-3P0DP02 117 aa7.24□□□□□ -1.25
LINC01238-202ENST00000426962 IGHV3-30-5P0DP03 117 aa7.24□□□□□ -1.25
LINC01238-202ENST00000426962 DERL1Q9BUN8 251 aa7.24□□□□□ -1.25
LINC01238-202ENST00000426962 HSPG2P98160 4391 aa7.23□□□□□ -1.25
LINC01238-202ENST00000426962 TRBV10-1A0A0K0K1A3 114 aa7.23□□□□□ -1.25
LINC01238-202ENST00000426962 PSCAO43653 123 aa7.23□□□□□ -1.25
LINC01238-202ENST00000426962 PDE6DO43924 150 aa7.23□□□□□ -1.25
LINC01238-202ENST00000426962 IFNA1P01562 189 aa7.23□□□□□ -1.25
LINC01238-202ENST00000426962 OR5AL1P0C617 328 aa7.23□□□□□ -1.25
LINC01238-202ENST00000426962 RAB4BP61018 213 aa7.23□□□□□ -1.25
LINC01238-202ENST00000426962 SPANXN1Q5VSR9 72 aa7.23□□□□□ -1.25
LINC01238-202ENST00000426962 CDPF1Q6NVV7 123 aa7.23□□□□□ -1.25
LINC01238-202ENST00000426962 AKAP14Q86UN6 197 aa7.23□□□□□ -1.25
LINC01238-202ENST00000426962 DAZAP1Q96EP5 407 aaKnown RBP7.23□□□□□ -1.25
LINC01238-202ENST00000426962 RYR1P21817 5038 aa7.23□□□□□ -1.25
LINC01238-202ENST00000426962 TRBV7-3A0A075B6L6 115 aa7.22□□□□□ -1.25
LINC01238-202ENST00000426962 RAB19A4D1S5 217 aa7.22□□□□□ -1.25
LINC01238-202ENST00000426962 IGLV2-8P01709 118 aa7.22□□□□□ -1.25
LINC01238-202ENST00000426962 TAGLN2P37802 199 aaKnown RBP7.22□□□□□ -1.25
LINC01238-202ENST00000426962 RPL36AP83881 106 aaKnown RBP7.22□□□□□ -1.25
LINC01238-202ENST00000426962 MEF2BQ02080 365 aaPredicted RBP7.22□□□□□ -1.25
LINC01238-202ENST00000426962 CENPWQ5EE01 88 aa7.22□□□□□ -1.25
LINC01238-202ENST00000426962 OR10AG1Q8NH19 301 aa7.22□□□□□ -1.25
LINC01238-202ENST00000426962 RPL36ALQ969Q0 106 aaKnown RBP7.22□□□□□ -1.25
LINC01238-202ENST00000426962 SMIM12Q96EX1 92 aa7.22□□□□□ -1.25
LINC01238-202ENST00000426962 MED9Q9NWA0 146 aa7.22□□□□□ -1.25
LINC01238-202ENST00000426962 VAX2Q9UIW0 290 aa7.22□□□□□ -1.25
LINC01238-202ENST00000426962 DNAH5Q8TE73 4624 aa7.21□□□□□ -1.25
LINC01238-202ENST00000426962 BCL2P10415 239 aa7.21□□□□□ -1.26
LINC01238-202ENST00000426962 FUSP35637 526 aaKnown RBP eCLIP7.21□□□□□ -1.26
LINC01238-202ENST00000426962 GNG4P50150 75 aa7.21□□□□□ -1.26
LINC01238-202ENST00000426962 RPS20P60866 119 aaKnown RBP7.21□□□□□ -1.26
LINC01238-202ENST00000426962 LAGE3Q14657 143 aa7.21□□□□□ -1.26
LINC01238-202ENST00000426962 C9orf62Q8N4C0 152 aa7.21□□□□□ -1.26
LINC01238-202ENST00000426962 TM2D2Q9BX73 214 aa7.21□□□□□ -1.26
LINC01238-202ENST00000426962 Q9HAA7 133 aa7.21□□□□□ -1.26
LINC01238-202ENST00000426962 hCG_2014768A0A024R1R8 64 aa7.2□□□□□ -1.26
LINC01238-202ENST00000426962 TRAV8-3A0A0A6YYJ7 113 aa7.2□□□□□ -1.26
LINC01238-202ENST00000426962 MUC21A0A0G2JKD1 596 aa7.2□□□□□ -1.26
LINC01238-202ENST00000426962 MUC21A0A140T8X8 626 aa7.2□□□□□ -1.26
LINC01238-202ENST00000426962 C19orf71A6NCJ1 209 aa7.2□□□□□ -1.26
LINC01238-202ENST00000426962 LRCOL1A6NCL2 159 aa7.2□□□□□ -1.26
LINC01238-202ENST00000426962 UBE2D3P61077 147 aa7.2□□□□□ -1.26
LINC01238-202ENST00000426962 SSTP61278 116 aa7.2□□□□□ -1.26
LINC01238-202ENST00000426962 UBE2D2P62837 147 aa7.2□□□□□ -1.26
LINC01238-202ENST00000426962 ZNF56Q15929 161 aa7.2□□□□□ -1.26
LINC01238-202ENST00000426962 TOR2AQ5JU69 321 aa7.2□□□□□ -1.26
LINC01238-202ENST00000426962 MAPKAPK5-AS1Q8N8E1 139 aa7.2□□□□□ -1.26
LINC01238-202ENST00000426962 OR10G8Q8NGN5 311 aa7.2□□□□□ -1.26
LINC01238-202ENST00000426962 BIN3Q9NQY0 253 aa7.2□□□□□ -1.26
LINC01238-202ENST00000426962 URGCP-MRPS24S4R325 110 aa7.2□□□□□ -1.26
LINC01238-202ENST00000426962 XKRY2A2RUG3 117 aa7.19□□□□□ -1.26
LINC01238-202ENST00000426962 F5H697 171 aa7.19□□□□□ -1.26
LINC01238-202ENST00000426962 SMIM17P0DL12 118 aa7.19□□□□□ -1.26
LINC01238-202ENST00000426962 BLOC1S1P78537 153 aa7.19□□□□□ -1.26
LINC01238-202ENST00000426962 DAZ4Q86SG3 579 aaKnown RBP7.19□□□□□ -1.26
LINC01238-202ENST00000426962 NIT1Q86X76 327 aa7.19□□□□□ -1.26
LINC01238-202ENST00000426962 Q8N3U1 123 aa7.19□□□□□ -1.26
LINC01238-202ENST00000426962 NEXN-AS1Q8NBZ9 246 aa7.19□□□□□ -1.26
LINC01238-202ENST00000426962 OR2D3Q8NGH3 330 aa7.19□□□□□ -1.26
LINC01238-202ENST00000426962 KRTAP4-5Q9BYR2 181 aa7.19□□□□□ -1.26
LINC01238-202ENST00000426962 DAZ3Q9NR90 486 aaKnown RBP7.19□□□□□ -1.26
LINC01238-202ENST00000426962 KIF25-AS1Q9Y6Z4 181 aa7.19□□□□□ -1.26
LINC01238-202ENST00000426962 APOBP04114 4563 aaKnown RBP7.18□□□□□ -1.26
LINC01238-202ENST00000426962 F2Z2F3 143 aa7.18□□□□□ -1.26
LINC01238-202ENST00000426962 P01737 135 aa7.18□□□□□ -1.26
LINC01238-202ENST00000426962 IGLC6P0CF74 106 aa7.18□□□□□ -1.26
LINC01238-202ENST00000426962 GZMBP10144 247 aa7.18□□□□□ -1.26
LINC01238-202ENST00000426962 Q8N1X5 172 aa7.18□□□□□ -1.26
LINC01238-202ENST00000426962 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.18□□□□□ -1.26
LINC01238-202ENST00000426962 FER1L6-AS1Q8NA97 138 aa7.18□□□□□ -1.26
LINC01238-202ENST00000426962 TRBV20OR9-2A0A075B6H5 130 aa7.17□□□□□ -1.26
LINC01238-202ENST00000426962 A0A087WX48 190 aa7.17□□□□□ -1.26
LINC01238-202ENST00000426962 TRBV6-8A0A0A6YYG3 113 aa7.17□□□□□ -1.26
LINC01238-202ENST00000426962 RBFOX3A6NFN3 312 aa7.17□□□□□ -1.26
LINC01238-202ENST00000426962 GCSHP23434 173 aa7.17□□□□□ -1.26
LINC01238-202ENST00000426962 CACNG7P62955 275 aa7.17□□□□□ -1.26
LINC01238-202ENST00000426962 ELOBQ15370 118 aa7.17□□□□□ -1.26
LINC01238-202ENST00000426962 KCNIP4Q6PIL6 250 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms