RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 TRAV12-1A0A0B4J245 112 aa10.19□□□□□ -0.78
LRCH3-203ENST00000425562 LY6DQ14210 128 aa10.18□□□□□ -0.78
LRCH3-203ENST00000425562 M0R1W7 72 aa10.18□□□□□ -0.78
LRCH3-203ENST00000425562 COX6B1P14854 86 aa10.18□□□□□ -0.78
LRCH3-203ENST00000425562 LINC00477Q96M19 166 aa10.18□□□□□ -0.78
LRCH3-203ENST00000425562 ZNF48Q96MX3 618 aaPredicted RBP10.18□□□□□ -0.78
LRCH3-203ENST00000425562 DPH3P1Q9H4G8 78 aa10.18□□□□□ -0.78
LRCH3-203ENST00000425562 ABCA2Q9BZC7 2435 aa10.18□□□□□ -0.78
LRCH3-203ENST00000425562 A4D1N5 150 aa10.17□□□□□ -0.78
LRCH3-203ENST00000425562 RNF223E7ERA6 249 aa10.17□□□□□ -0.78
LRCH3-203ENST00000425562 ZNF688P0C7X2 276 aa10.17□□□□□ -0.78
LRCH3-203ENST00000425562 SAA4P35542 130 aa10.17□□□□□ -0.78
LRCH3-203ENST00000425562 ASIPP42127 132 aa10.17□□□□□ -0.78
LRCH3-203ENST00000425562 C11orf71Q6IPW1 123 aa10.17□□□□□ -0.78
LRCH3-203ENST00000425562 TEX29Q8N6K0 151 aa10.17□□□□□ -0.78
LRCH3-203ENST00000425562 TRAV4A0A0B4J268 109 aa10.17□□□□□ -0.78
LRCH3-203ENST00000425562 UBE2D3P61077 147 aa10.17□□□□□ -0.78
LRCH3-203ENST00000425562 UBE2D2P62837 147 aa10.17□□□□□ -0.78
LRCH3-203ENST00000425562 ZNRF2Q8NHG8 242 aa10.17□□□□□ -0.78
LRCH3-203ENST00000425562 NTN5Q8WTR8 489 aaPredicted RBP10.17□□□□□ -0.78
LRCH3-203ENST00000425562 IGLV4-69A0A075B6H9 119 aa10.17□□□□□ -0.78
LRCH3-203ENST00000425562 SLC25A20O43772 301 aa10.17□□□□□ -0.78
LRCH3-203ENST00000425562 ZFAND6Q6FIF0 208 aa10.17□□□□□ -0.78
LRCH3-203ENST00000425562 EDN2P20800 178 aa10.16□□□□□ -0.78
LRCH3-203ENST00000425562 SRSF2Q01130 221 aaKnown RBP10.16□□□□□ -0.78
LRCH3-203ENST00000425562 ERG28Q9UKR5 140 aa10.16□□□□□ -0.78
LRCH3-203ENST00000425562 POLQO75417 2590 aa10.16□□□□□ -0.78
LRCH3-203ENST00000425562 RNASE13Q5GAN3 156 aaKnown RBP10.16□□□□□ -0.78
LRCH3-203ENST00000425562 Q6ZSV7 163 aa10.16□□□□□ -0.78
LRCH3-203ENST00000425562 Q8N6K4 173 aa10.16□□□□□ -0.78
LRCH3-203ENST00000425562 SVIPQ8NHG7 77 aa10.16□□□□□ -0.78
LRCH3-203ENST00000425562 BPESC1Q9GZL8 116 aa10.16□□□□□ -0.78
LRCH3-203ENST00000425562 ZANQ9Y493 2812 aa10.15□□□□□ -0.78
LRCH3-203ENST00000425562 TEX49A0A1B0GTD5 131 aa10.15□□□□□ -0.78
LRCH3-203ENST00000425562 PRSS2P07478 247 aa10.15□□□□□ -0.78
LRCH3-203ENST00000425562 ZFAND2AQ8N6M9 145 aa10.15□□□□□ -0.78
LRCH3-203ENST00000425562 IGHV3-30P01768 117 aa10.15□□□□□ -0.78
LRCH3-203ENST00000425562 IGHV3-30-5P0DP03 117 aa10.15□□□□□ -0.78
LRCH3-203ENST00000425562 C10orf126Q8N4M7 172 aa10.15□□□□□ -0.78
LRCH3-203ENST00000425562 PRO1854Q9UHT4 67 aa10.15□□□□□ -0.78
LRCH3-203ENST00000425562 USP9YO00507 2555 aaPredicted RBP10.15□□□□□ -0.79
LRCH3-203ENST00000425562 EIF4EBP3O60516 100 aaPredicted RBP10.14□□□□□ -0.79
LRCH3-203ENST00000425562 FBXL19-AS1Q494R0 122 aa10.14□□□□□ -0.79
LRCH3-203ENST00000425562 BRD3OSQ6XYD6 125 aa10.14□□□□□ -0.79
LRCH3-203ENST00000425562 OR10J6PQ8NGY7 276 aa10.14□□□□□ -0.79
LRCH3-203ENST00000425562 LGALS3P17931 250 aaKnown RBP10.14□□□□□ -0.79
LRCH3-203ENST00000425562 HERVK_113P61574 105 aa10.14□□□□□ -0.79
LRCH3-203ENST00000425562 CFAP46Q8IYW2 2715 aa10.14□□□□□ -0.79
LRCH3-203ENST00000425562 RBAKDNA6NC62 111 aa10.14□□□□□ -0.79
LRCH3-203ENST00000425562 CCDC179H3BU77 68 aa10.14□□□□□ -0.79
LRCH3-203ENST00000425562 HTN1P15515 57 aa10.14□□□□□ -0.79
LRCH3-203ENST00000425562 C9orf47Q6ZRZ4 202 aa10.14□□□□□ -0.79
LRCH3-203ENST00000425562 GPHB5Q86YW7 130 aa10.14□□□□□ -0.79
LRCH3-203ENST00000425562 SIRPDQ9H106 197 aa10.14□□□□□ -0.79
LRCH3-203ENST00000425562 J3QQQ9 107 aa10.13□□□□□ -0.79
LRCH3-203ENST00000425562 RNASE3P12724 160 aaKnown RBP10.13□□□□□ -0.79
LRCH3-203ENST00000425562 KLRB1Q12918 225 aa10.13□□□□□ -0.79
LRCH3-203ENST00000425562 TRAV12-2A0A075B6T6 113 aa10.12□□□□□ -0.79
LRCH3-203ENST00000425562 TRAV12-3A0A0B4J271 114 aa10.12□□□□□ -0.79
LRCH3-203ENST00000425562 TRAV21A0A0B4J279 112 aa10.12□□□□□ -0.79
LRCH3-203ENST00000425562 SDHAF1A6NFY7 115 aa10.12□□□□□ -0.79
LRCH3-203ENST00000425562 MUSTN1Q8IVN3 82 aa10.12□□□□□ -0.79
LRCH3-203ENST00000425562 ATP6V0E2Q8NHE4 81 aa10.12□□□□□ -0.79
LRCH3-203ENST00000425562 FAM110DQ8TAY7 271 aaPredicted RBP10.12□□□□□ -0.79
LRCH3-203ENST00000425562 EEF1AKMT3Q96AZ1 226 aa10.12□□□□□ -0.79
LRCH3-203ENST00000425562 SETD2Q9BYW2 2564 aaPredicted RBP10.12□□□□□ -0.79
LRCH3-203ENST00000425562 PMVKQ15126 192 aa10.12□□□□□ -0.79
LRCH3-203ENST00000425562 A8MZ25 164 aa10.11□□□□□ -0.79
LRCH3-203ENST00000425562 SNCGO76070 127 aa10.11□□□□□ -0.79
LRCH3-203ENST00000425562 GAGE2BQ13066 116 aa10.11□□□□□ -0.79
LRCH3-203ENST00000425562 LY6EQ16553 131 aa10.11□□□□□ -0.79
LRCH3-203ENST00000425562 GAGE2EQ4V326 116 aa10.11□□□□□ -0.79
LRCH3-203ENST00000425562 TTC32Q5I0X7 151 aa10.11□□□□□ -0.79
LRCH3-203ENST00000425562 SUMO4Q6EEV6 95 aa10.11□□□□□ -0.79
LRCH3-203ENST00000425562 GAGE2DQ9UEU5 116 aa10.11□□□□□ -0.79
LRCH3-203ENST00000425562 IGHV3-73A0A0B4J1V6 119 aa10.11□□□□□ -0.79
LRCH3-203ENST00000425562 NHLRC4P0CG21 123 aaPredicted RBP10.11□□□□□ -0.79
LRCH3-203ENST00000425562 MYO18BQ8IUG5 2567 aa10.11□□□□□ -0.79
LRCH3-203ENST00000425562 PRRC2AP48634 2157 aaKnown RBP10.11□□□□□ -0.79
LRCH3-203ENST00000425562 CEMP1Q6PRD7 247 aaPredicted RBP10.11□□□□□ -0.79
LRCH3-203ENST00000425562 SPXQ9BT56 116 aa10.11□□□□□ -0.79
LRCH3-203ENST00000425562 PKD1L2Q7Z442 2459 aa10.11□□□□□ -0.79
LRCH3-203ENST00000425562 IGHV4-4A0A075B6R2 117 aa10.1□□□□□ -0.79
LRCH3-203ENST00000425562 C19orf84I3L1E1 186 aa10.1□□□□□ -0.79
LRCH3-203ENST00000425562 ZNF56Q15929 161 aa10.1□□□□□ -0.79
LRCH3-203ENST00000425562 SLC25A29Q8N8R3 303 aa10.1□□□□□ -0.79
LRCH3-203ENST00000425562 A0A0J9YXV3 536 aa10.1□□□□□ -0.79
LRCH3-203ENST00000425562 IGIPA6NJ69 53 aa10.1□□□□□ -0.79
LRCH3-203ENST00000425562 MINOS1Q5TGZ0 78 aa10.1□□□□□ -0.79
LRCH3-203ENST00000425562 Q8N1Y9 231 aa10.1□□□□□ -0.79
LRCH3-203ENST00000425562 MINOS1-NBL1R4GNA1 71 aa10.1□□□□□ -0.79
LRCH3-203ENST00000425562 CACNA1AO00555 2505 aa10.1□□□□□ -0.79
LRCH3-203ENST00000425562 GAGE5Q13069 117 aa10.09□□□□□ -0.79
LRCH3-203ENST00000425562 GAGE6Q13070 117 aa10.09□□□□□ -0.79
LRCH3-203ENST00000425562 EBI3Q14213 229 aa10.09□□□□□ -0.79
LRCH3-203ENST00000425562 LYRM7Q5U5X0 104 aa10.09□□□□□ -0.79
LRCH3-203ENST00000425562 TMEM190Q8WZ59 177 aa10.09□□□□□ -0.79
LRCH3-203ENST00000425562 SMIM20Q8N5G0 67 aa10.09□□□□□ -0.79
LRCH3-203ENST00000425562 USP9XQ93008 2570 aaPredicted RBP10.09□□□□□ -0.79
LRCH3-203ENST00000425562 MYO9AB2RTY4 2548 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms