RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 TRAV41A0A0B4J266 112 aa8.98□□□□□ -0.97
ERCC1-204ENST00000423698 LINC01549A6NIU2 74 aa8.98□□□□□ -0.97
ERCC1-204ENST00000423698 F8WDY8 70 aa8.98□□□□□ -0.97
ERCC1-204ENST00000423698 DTX2Q86UW9 622 aa8.98□□□□□ -0.97
ERCC1-204ENST00000423698 LYPD1Q8N2G4 141 aa8.98□□□□□ -0.97
ERCC1-204ENST00000423698 HTN1P15515 57 aa8.98□□□□□ -0.97
ERCC1-204ENST00000423698 TRAV8-2A0A0B4J237 113 aa8.98□□□□□ -0.97
ERCC1-204ENST00000423698 MGPP08493 103 aa8.98□□□□□ -0.97
ERCC1-204ENST00000423698 C5orf56Q8N8D9 126 aa8.98□□□□□ -0.97
ERCC1-204ENST00000423698 FAM110DQ8TAY7 271 aaPredicted RBP8.98□□□□□ -0.97
ERCC1-204ENST00000423698 EEF1AKMT3Q96AZ1 226 aa8.98□□□□□ -0.97
ERCC1-204ENST00000423698 DPM2O94777 84 aa8.97□□□□□ -0.97
ERCC1-204ENST00000423698 RNASE4P34096 147 aaKnown RBP8.97□□□□□ -0.97
ERCC1-204ENST00000423698 PAX8Q06710 450 aa8.97□□□□□ -0.97
ERCC1-204ENST00000423698 PDE6HQ13956 83 aa8.97□□□□□ -0.97
ERCC1-204ENST00000423698 MINOS1Q5TGZ0 78 aa8.97□□□□□ -0.97
ERCC1-204ENST00000423698 ATP6V0E2Q8NHE4 81 aa8.97□□□□□ -0.97
ERCC1-204ENST00000423698 MINOS1-NBL1R4GNA1 71 aa8.97□□□□□ -0.97
ERCC1-204ENST00000423698 TNFRSF6BO95407 300 aa8.97□□□□□ -0.97
ERCC1-204ENST00000423698 AVPP01185 164 aa8.97□□□□□ -0.97
ERCC1-204ENST00000423698 S100A4P26447 101 aaKnown RBP8.97□□□□□ -0.97
ERCC1-204ENST00000423698 EMP1P54849 157 aa8.97□□□□□ -0.97
ERCC1-204ENST00000423698 H7C2G1 150 aa8.96□□□□□ -0.97
ERCC1-204ENST00000423698 SCGB2A1O75556 95 aa8.96□□□□□ -0.97
ERCC1-204ENST00000423698 CCL19Q99731 98 aa8.96□□□□□ -0.97
ERCC1-204ENST00000423698 GNRH2O43555 120 aa8.96□□□□□ -0.98
ERCC1-204ENST00000423698 C14orf178Q8N769 122 aaPredicted RBP8.96□□□□□ -0.98
ERCC1-204ENST00000423698 TMEM126AQ9H061 195 aa8.96□□□□□ -0.98
ERCC1-204ENST00000423698 MAP1LC3AQ9H492 121 aa8.96□□□□□ -0.98
ERCC1-204ENST00000423698 SMIM9A6NGZ8 99 aa8.96□□□□□ -0.98
ERCC1-204ENST00000423698 HOXA3O43365 443 aaPredicted RBP8.96□□□□□ -0.98
ERCC1-204ENST00000423698 MORN3Q6PF18 240 aaPredicted RBP8.96□□□□□ -0.98
ERCC1-204ENST00000423698 RNF185Q96GF1 192 aa8.96□□□□□ -0.98
ERCC1-204ENST00000423698 CARD19Q96LW7 228 aa8.96□□□□□ -0.98
ERCC1-204ENST00000423698 Q6AWC8 147 aa8.95□□□□□ -0.98
ERCC1-204ENST00000423698 CCDC179H3BU77 68 aa8.95□□□□□ -0.98
ERCC1-204ENST00000423698 SRSF9Q13242 221 aaKnown RBP eCLIP8.95□□□□□ -0.98
ERCC1-204ENST00000423698 SCGB1D4Q6XE38 83 aa8.95□□□□□ -0.98
ERCC1-204ENST00000423698 JPT2Q9H910 190 aa8.95□□□□□ -0.98
ERCC1-204ENST00000423698 KLHL30-AS1Q8NEE0 82 aa8.94□□□□□ -0.98
ERCC1-204ENST00000423698 PIFOQ8TCI5 191 aa8.94□□□□□ -0.98
ERCC1-204ENST00000423698 RPL39LQ96EH5 51 aaKnown RBP8.94□□□□□ -0.98
ERCC1-204ENST00000423698 LINC00477Q96M19 166 aa8.94□□□□□ -0.98
ERCC1-204ENST00000423698 ZFAND6Q6FIF0 208 aa8.94□□□□□ -0.98
ERCC1-204ENST00000423698 DNAJC30Q96LL9 226 aa8.94□□□□□ -0.98
ERCC1-204ENST00000423698 HIGD1BQ9P298 99 aa8.94□□□□□ -0.98
ERCC1-204ENST00000423698 AKAP9Q99996 3911 aa8.93□□□□□ -0.98
ERCC1-204ENST00000423698 TRAV12-2A0A075B6T6 113 aa8.93□□□□□ -0.98
ERCC1-204ENST00000423698 IGLC6P0CF74 106 aa8.93□□□□□ -0.98
ERCC1-204ENST00000423698 EBI3Q14213 229 aa8.93□□□□□ -0.98
ERCC1-204ENST00000423698 IGHV1-69DA0A0B4J2H0 117 aa8.93□□□□□ -0.98
ERCC1-204ENST00000423698 IGHV1-69P01742 117 aa8.93□□□□□ -0.98
ERCC1-204ENST00000423698 SCGB1C2P0DMR2 95 aa8.93□□□□□ -0.98
ERCC1-204ENST00000423698 CFAP126Q5VTH2 177 aa8.93□□□□□ -0.98
ERCC1-204ENST00000423698 TEX29Q8N6K0 151 aa8.93□□□□□ -0.98
ERCC1-204ENST00000423698 PRM2P04554 102 aa8.92□□□□□ -0.98
ERCC1-204ENST00000423698 ZNF493Q6ZR52 646 aa8.92□□□□□ -0.98
ERCC1-204ENST00000423698 PLEKHB2Q96CS7 222 aa8.92□□□□□ -0.98
ERCC1-204ENST00000423698 FAM74A4Q5TZK3 123 aa8.92□□□□□ -0.98
ERCC1-204ENST00000423698 DLX4Q92988 240 aaPredicted RBP8.92□□□□□ -0.98
ERCC1-204ENST00000423698 PRORYQ9H606 182 aa8.92□□□□□ -0.98
ERCC1-204ENST00000423698 MOB4Q9Y3A3 225 aa8.92□□□□□ -0.98
ERCC1-204ENST00000423698 A0A087WWL8 130 aa8.91□□□□□ -0.98
ERCC1-204ENST00000423698 CRLF1O75462 422 aa8.91□□□□□ -0.98
ERCC1-204ENST00000423698 MYOZ3Q8TDC0 251 aa8.91□□□□□ -0.98
ERCC1-204ENST00000423698 U3KQK5 164 aa8.91□□□□□ -0.98
ERCC1-204ENST00000423698 FLNAP21333 2647 aaKnown RBP8.91□□□□□ -0.98
ERCC1-204ENST00000423698 IGHV4-59P01825 116 aa8.91□□□□□ -0.98
ERCC1-204ENST00000423698 ZNF688P0C7X2 276 aa8.91□□□□□ -0.98
ERCC1-204ENST00000423698 DUX3Q96PT4 197 aa8.91□□□□□ -0.98
ERCC1-204ENST00000423698 RHODO00212 210 aa8.91□□□□□ -0.98
ERCC1-204ENST00000423698 RHPN1-AS1Q9BWJ2 59 aa8.91□□□□□ -0.98
ERCC1-204ENST00000423698 TRAV4A0A0B4J268 109 aa8.9□□□□□ -0.98
ERCC1-204ENST00000423698 OOSP1A8MZH6 123 aa8.9□□□□□ -0.98
ERCC1-204ENST00000423698 F5H697 171 aa8.9□□□□□ -0.98
ERCC1-204ENST00000423698 TCL1BO95988 128 aa8.9□□□□□ -0.98
ERCC1-204ENST00000423698 ANKRD29Q8N6D5 301 aa8.9□□□□□ -0.98
ERCC1-204ENST00000423698 PIMREGQ9BSJ6 248 aa8.9□□□□□ -0.98
ERCC1-204ENST00000423698 PHLDA3Q9Y5J5 127 aa8.9□□□□□ -0.98
ERCC1-204ENST00000423698 TRBV7-3A0A075B6L6 115 aa8.89□□□□□ -0.99
ERCC1-204ENST00000423698 TRAV12-3A0A0B4J271 114 aa8.89□□□□□ -0.99
ERCC1-204ENST00000423698 GPHB5Q86YW7 130 aa8.89□□□□□ -0.99
ERCC1-204ENST00000423698 ZMAT4Q9H898 229 aa8.89□□□□□ -0.99
ERCC1-204ENST00000423698 IGHV7-4-1A0A0J9YVY3 117 aa8.89□□□□□ -0.99
ERCC1-204ENST00000423698 TRBV6-1A0A0K0K1D8 114 aa8.89□□□□□ -0.99
ERCC1-204ENST00000423698 ZNF815PA8K554 130 aa8.89□□□□□ -0.99
ERCC1-204ENST00000423698 CRIP2P52943 208 aaPredicted RBP8.89□□□□□ -0.99
ERCC1-204ENST00000423698 NDUFV3P56181 108 aaKnown RBP8.89□□□□□ -0.99
ERCC1-204ENST00000423698 C11orf44Q8N8P7 122 aa8.89□□□□□ -0.99
ERCC1-204ENST00000423698 OR10J6PQ8NGY7 276 aa8.89□□□□□ -0.99
ERCC1-204ENST00000423698 BEX4Q9NWD9 120 aaPredicted RBP8.89□□□□□ -0.99
ERCC1-204ENST00000423698 FN1P02751 2386 aaKnown RBP8.89□□□□□ -0.99
ERCC1-204ENST00000423698 TRBV7-1A0A0A6YYK4 115 aa8.89□□□□□ -0.99
ERCC1-204ENST00000423698 Q6Q795 121 aa8.89□□□□□ -0.99
ERCC1-204ENST00000423698 TENM4Q6N022 2769 aa8.88□□□□□ -0.99
ERCC1-204ENST00000423698 APCP25054 2843 aa8.88□□□□□ -0.99
ERCC1-204ENST00000423698 MUC4Q99102 2169 aa8.88□□□□□ -0.99
ERCC1-204ENST00000423698 SLC25A16P16260 332 aa8.88□□□□□ -0.99
ERCC1-204ENST00000423698 DEFB136Q30KP8 78 aa8.88□□□□□ -0.99
ERCC1-204ENST00000423698 TRPT1Q86TN4 253 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms