RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 PFDN5Q99471 154 aa6.16□□□□□ -1.42
LINC01238-201ENST00000416204 BIN3Q9NQY0 253 aa6.16□□□□□ -1.42
LINC01238-201ENST00000416204 TRBV19A0A075B6N1 114 aa6.15□□□□□ -1.42
LINC01238-201ENST00000416204 HMGB3O15347 200 aaKnown RBP6.15□□□□□ -1.42
LINC01238-201ENST00000416204 NDUFB4O95168 129 aa6.15□□□□□ -1.42
LINC01238-201ENST00000416204 ORM1P02763 201 aa6.15□□□□□ -1.42
LINC01238-201ENST00000416204 ARL14EPLP0DKL9 152 aa6.15□□□□□ -1.42
LINC01238-201ENST00000416204 ASIPP42127 132 aa6.15□□□□□ -1.42
LINC01238-201ENST00000416204 AKR1C3P42330 323 aa6.15□□□□□ -1.42
LINC01238-201ENST00000416204 GCSAMLQ5JQS6 135 aa6.15□□□□□ -1.42
LINC01238-201ENST00000416204 C9orf47Q6ZRZ4 202 aa6.15□□□□□ -1.42
LINC01238-201ENST00000416204 BTF3L4Q96K17 158 aa6.15□□□□□ -1.42
LINC01238-201ENST00000416204 CHAC1Q9BUX1 264 aa6.15□□□□□ -1.42
LINC01238-201ENST00000416204 PARLQ9H300 379 aa6.15□□□□□ -1.42
LINC01238-201ENST00000416204 NAGKQ9UJ70 344 aa6.15□□□□□ -1.42
LINC01238-201ENST00000416204 TRAV8-6A0A0B4J262 113 aa6.14□□□□□ -1.43
LINC01238-201ENST00000416204 PPP1R2P9O14990 202 aa6.14□□□□□ -1.43
LINC01238-201ENST00000416204 CRISP2P16562 243 aa6.14□□□□□ -1.43
LINC01238-201ENST00000416204 RPL23P62829 140 aaKnown RBP6.14□□□□□ -1.43
LINC01238-201ENST00000416204 TMEM78Q5T7P6 136 aa6.14□□□□□ -1.43
LINC01238-201ENST00000416204 CST9LP1Q5W188 147 aa6.14□□□□□ -1.43
LINC01238-201ENST00000416204 OR4C5Q8NGB2 326 aa6.14□□□□□ -1.43
LINC01238-201ENST00000416204 C11orf52Q96A22 123 aa6.14□□□□□ -1.43
LINC01238-201ENST00000416204 DAZAP1Q96EP5 407 aaKnown RBP6.14□□□□□ -1.43
LINC01238-201ENST00000416204 DNAJC30Q96LL9 226 aa6.14□□□□□ -1.43
LINC01238-201ENST00000416204 RNF24Q9Y225 148 aa6.14□□□□□ -1.43
LINC01238-201ENST00000416204 TRBV24-1A0A075B6N3 115 aa6.13□□□□□ -1.43
LINC01238-201ENST00000416204 IGHV3-73A0A0B4J1V6 119 aa6.13□□□□□ -1.43
LINC01238-201ENST00000416204 A0A1W2PRE2 83 aa6.13□□□□□ -1.43
LINC01238-201ENST00000416204 RS1O15537 224 aa6.13□□□□□ -1.43
LINC01238-201ENST00000416204 MT1HL1P0DM35 61 aa6.13□□□□□ -1.43
LINC01238-201ENST00000416204 S100PP25815 95 aa6.13□□□□□ -1.43
LINC01238-201ENST00000416204 RPL37AP61513 92 aaKnown RBP6.13□□□□□ -1.43
LINC01238-201ENST00000416204 ODF1Q14990 250 aa6.13□□□□□ -1.43
LINC01238-201ENST00000416204 ELOBQ15370 118 aa6.13□□□□□ -1.43
LINC01238-201ENST00000416204 ZNF674Q2M3X9 581 aa6.13□□□□□ -1.43
LINC01238-201ENST00000416204 ISOC2Q96AB3 205 aa6.13□□□□□ -1.43
LINC01238-201ENST00000416204 IMMP2LQ96T52 175 aa6.13□□□□□ -1.43
LINC01238-201ENST00000416204 TCEAL7Q9BRU2 100 aa6.13□□□□□ -1.43
LINC01238-201ENST00000416204 KRTAP3-3Q9BYR6 98 aa6.13□□□□□ -1.43
LINC01238-201ENST00000416204 KRTAP3-2Q9BYR7 98 aa6.13□□□□□ -1.43
LINC01238-201ENST00000416204 TRAV4A0A0B4J268 109 aa6.12□□□□□ -1.43
LINC01238-201ENST00000416204 IGLV2-11P01706 119 aa6.12□□□□□ -1.43
LINC01238-201ENST00000416204 UBE2G2P60604 165 aa6.12□□□□□ -1.43
LINC01238-201ENST00000416204 ADIRFQ15847 76 aa6.12□□□□□ -1.43
LINC01238-201ENST00000416204 MIR17HGQ75NE6 70 aa6.12□□□□□ -1.43
LINC01238-201ENST00000416204 DAZ4Q86SG3 579 aaKnown RBP6.12□□□□□ -1.43
LINC01238-201ENST00000416204 RASL10AQ92737 203 aa6.12□□□□□ -1.43
LINC01238-201ENST00000416204 MRPL53Q96EL3 112 aaKnown RBP6.12□□□□□ -1.43
LINC01238-201ENST00000416204 TM2D2Q9BX73 214 aa6.12□□□□□ -1.43
LINC01238-201ENST00000416204 DAZ3Q9NR90 486 aaKnown RBP6.12□□□□□ -1.43
LINC01238-201ENST00000416204 ZNF492Q9P255 531 aa6.12□□□□□ -1.43
LINC01238-201ENST00000416204 GNRH2O43555 120 aa6.11□□□□□ -1.43
LINC01238-201ENST00000416204 ZNF253O75346 499 aa6.11□□□□□ -1.43
LINC01238-201ENST00000416204 EIF3GO75821 320 aaKnown RBP eCLIP6.11□□□□□ -1.43
LINC01238-201ENST00000416204 S100A6P06703 90 aa6.11□□□□□ -1.43
LINC01238-201ENST00000416204 HIST1H1EP10412 219 aaKnown RBP6.11□□□□□ -1.43
LINC01238-201ENST00000416204 GATA1P15976 413 aaPredicted RBP6.11□□□□□ -1.43
LINC01238-201ENST00000416204 ZNF138P52744 262 aa6.11□□□□□ -1.43
LINC01238-201ENST00000416204 KCNIP4Q6PIL6 250 aa6.11□□□□□ -1.43
LINC01238-201ENST00000416204 LINC01551Q86U37 167 aa6.11□□□□□ -1.43
LINC01238-201ENST00000416204 SLC25A29Q8N8R3 303 aa6.11□□□□□ -1.43
LINC01238-201ENST00000416204 C5orf52A6NGY3 159 aa6.1□□□□□ -1.43
LINC01238-201ENST00000416204 OR7C2O60412 319 aa6.1□□□□□ -1.43
LINC01238-201ENST00000416204 PFN1P07737 140 aaKnown RBP6.1□□□□□ -1.43
LINC01238-201ENST00000416204 RPS10P46783 165 aaKnown RBP6.1□□□□□ -1.43
LINC01238-201ENST00000416204 TIRAPP58753 221 aa6.1□□□□□ -1.43
LINC01238-201ENST00000416204 LELP1Q5T871 98 aa6.1□□□□□ -1.43
LINC01238-201ENST00000416204 SH2D6Q7Z4S9 175 aa6.1□□□□□ -1.43
LINC01238-201ENST00000416204 FAM167A-AS1Q96KT0 104 aa6.1□□□□□ -1.43
LINC01238-201ENST00000416204 PAXXQ9BUH6 204 aa6.1□□□□□ -1.43
LINC01238-201ENST00000416204 SLC25A2Q9BXI2 301 aa6.1□□□□□ -1.43
LINC01238-201ENST00000416204 AAMDCQ9H7C9 122 aa6.1□□□□□ -1.43
LINC01238-201ENST00000416204 TRGV11A0A075B6L2 103 aa6.09□□□□□ -1.43
LINC01238-201ENST00000416204 TRAV9-1A0A075B6T8 112 aa6.09□□□□□ -1.43
LINC01238-201ENST00000416204 TGIF2-C20orf24A0A0A6YYL0 155 aa6.09□□□□□ -1.43
LINC01238-201ENST00000416204 SCO2A0A1W2PP80 73 aa6.09□□□□□ -1.43
LINC01238-201ENST00000416204 TYMSP04818 313 aa6.09□□□□□ -1.43
LINC01238-201ENST00000416204 CXCL1P09341 107 aa6.09□□□□□ -1.43
LINC01238-201ENST00000416204 OR10J4P0C629 311 aa6.09□□□□□ -1.43
LINC01238-201ENST00000416204 LAGE3Q14657 143 aa6.09□□□□□ -1.43
LINC01238-201ENST00000416204 SMUG1Q53HV7 270 aa6.09□□□□□ -1.43
LINC01238-201ENST00000416204 FAM159AQ6UWV7 190 aa6.09□□□□□ -1.43
LINC01238-201ENST00000416204 SPXQ9BT56 116 aa6.09□□□□□ -1.43
LINC01238-201ENST00000416204 OR51M1Q9H341 326 aa6.09□□□□□ -1.43
LINC01238-201ENST00000416204 TMEM14CQ9P0S9 112 aa6.09□□□□□ -1.43
LINC01238-201ENST00000416204 IGKV2D-24A0A075B6R9 120 aa6.08□□□□□ -1.44
LINC01238-201ENST00000416204 FBLL1A6NHQ2 334 aaKnown RBP6.08□□□□□ -1.44
LINC01238-201ENST00000416204 M0R2P5 195 aa6.08□□□□□ -1.44
LINC01238-201ENST00000416204 S100A8P05109 93 aa6.08□□□□□ -1.44
LINC01238-201ENST00000416204 S100A9P06702 114 aaKnown RBP6.08□□□□□ -1.44
LINC01238-201ENST00000416204 UBE2L3P68036 154 aaKnown RBP6.08□□□□□ -1.44
LINC01238-201ENST00000416204 RPL19P84098 196 aaKnown RBP6.08□□□□□ -1.44
LINC01238-201ENST00000416204 ZFP82Q8N141 532 aa6.08□□□□□ -1.44
LINC01238-201ENST00000416204 SMIM12Q96EX1 92 aa6.08□□□□□ -1.44
LINC01238-201ENST00000416204 SFRP2Q96HF1 295 aa6.08□□□□□ -1.44
LINC01238-201ENST00000416204 GTSF1LQ9H1H1 148 aa6.08□□□□□ -1.44
LINC01238-201ENST00000416204 URGCP-MRPS24S4R325 110 aa6.08□□□□□ -1.44
LINC01238-201ENST00000416204 TRAV8-3A0A0A6YYJ7 113 aa6.07□□□□□ -1.44
LINC01238-201ENST00000416204 GAGE12JA6NER3 117 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms