RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 M0R2N4 97 aa16.46■□□□□ 0.23
UBE2E3-202ENST00000410062 CRYGDP07320 174 aa16.46■□□□□ 0.23
UBE2E3-202ENST00000410062 RHOHQ15669 191 aa16.46■□□□□ 0.23
UBE2E3-202ENST00000410062 NEGR1Q7Z3B1 354 aa16.46■□□□□ 0.23
UBE2E3-202ENST00000410062 ZNRF2Q8NHG8 242 aa16.46■□□□□ 0.23
UBE2E3-202ENST00000410062 PRADC1Q9BSG0 188 aa16.46■□□□□ 0.23
UBE2E3-202ENST00000410062 RHODO00212 210 aa16.45■□□□□ 0.22
UBE2E3-202ENST00000410062 SMDT1Q9H4I9 107 aa16.45■□□□□ 0.22
UBE2E3-202ENST00000410062 ERVFC1-1P60608 527 aa16.43■□□□□ 0.22
UBE2E3-202ENST00000410062 LYPD5Q6UWN5 251 aa16.43■□□□□ 0.22
UBE2E3-202ENST00000410062 FAM231DQ6ZW35 169 aa16.43■□□□□ 0.22
UBE2E3-202ENST00000410062 C14orf178Q8N769 122 aaPredicted RBP16.43■□□□□ 0.22
UBE2E3-202ENST00000410062 MRPS16Q9Y3D3 137 aaKnown RBP16.43■□□□□ 0.22
UBE2E3-202ENST00000410062 GATCO43716 136 aaKnown RBP16.43■□□□□ 0.22
UBE2E3-202ENST00000410062 FAM74A3Q4VXF1 159 aa16.43■□□□□ 0.22
UBE2E3-202ENST00000410062 LYZL1Q6UWQ5 148 aa16.43■□□□□ 0.22
UBE2E3-202ENST00000410062 TMEM241Q24JQ0 296 aa16.42■□□□□ 0.22
UBE2E3-202ENST00000410062 CLLU1Q5K131 121 aa16.42■□□□□ 0.22
UBE2E3-202ENST00000410062 Q9UF83 564 aa16.42■□□□□ 0.22
UBE2E3-202ENST00000410062 A0A1W2PPQ1 181 aa16.41■□□□□ 0.22
UBE2E3-202ENST00000410062 UPK3BQ9BT76 320 aa16.41■□□□□ 0.22
UBE2E3-202ENST00000410062 MSRB1Q9NZV6 116 aa16.41■□□□□ 0.22
UBE2E3-202ENST00000410062 F2Z2F3 143 aa16.4■□□□□ 0.22
UBE2E3-202ENST00000410062 Q9H8V8 135 aa16.4■□□□□ 0.22
UBE2E3-202ENST00000410062 CACNG7P62955 275 aa16.39■□□□□ 0.21
UBE2E3-202ENST00000410062 GTSF1Q8WW33 167 aa16.39■□□□□ 0.21
UBE2E3-202ENST00000410062 CTRLP40313 264 aa16.38■□□□□ 0.21
UBE2E3-202ENST00000410062 RPL23P62829 140 aaKnown RBP16.38■□□□□ 0.21
UBE2E3-202ENST00000410062 SOHLH1Q5JUK2 328 aa16.38■□□□□ 0.21
UBE2E3-202ENST00000410062 AP1S3Q96PC3 154 aa16.38■□□□□ 0.21
UBE2E3-202ENST00000410062 NAT8Q9UHE5 227 aa16.38■□□□□ 0.21
UBE2E3-202ENST00000410062 DNAH2Q9P225 4427 aa16.38■□□□□ 0.21
UBE2E3-202ENST00000410062 GAGE12JA6NER3 117 aa16.38■□□□□ 0.21
UBE2E3-202ENST00000410062 GAGE1Q13065 139 aa16.38■□□□□ 0.21
UBE2E3-202ENST00000410062 GAGE4Q13068 117 aa16.38■□□□□ 0.21
UBE2E3-202ENST00000410062 GAGE5Q13069 117 aa16.38■□□□□ 0.21
UBE2E3-202ENST00000410062 ZNF56Q15929 161 aa16.38■□□□□ 0.21
UBE2E3-202ENST00000410062 GAGE13Q4V321 117 aa16.38■□□□□ 0.21
UBE2E3-202ENST00000410062 SH2D6Q7Z4S9 175 aa16.38■□□□□ 0.21
UBE2E3-202ENST00000410062 ADIRFQ15847 76 aa16.37■□□□□ 0.21
UBE2E3-202ENST00000410062 Q6ZR54 194 aa16.37■□□□□ 0.21
UBE2E3-202ENST00000410062 ISOC2Q96AB3 205 aa16.37■□□□□ 0.21
UBE2E3-202ENST00000410062 OSTCQ9NRP0 149 aa16.37■□□□□ 0.21
UBE2E3-202ENST00000410062 DNAH10Q8IVF4 4471 aa16.37■□□□□ 0.21
UBE2E3-202ENST00000410062 A8MWL6 223 aa16.36■□□□□ 0.21
UBE2E3-202ENST00000410062 NTF3P20783 257 aa16.36■□□□□ 0.21
UBE2E3-202ENST00000410062 KIF25-AS1Q9Y6Z4 181 aa16.36■□□□□ 0.21
UBE2E3-202ENST00000410062 NBDYA0A0U1RRE5 68 aa16.35■□□□□ 0.21
UBE2E3-202ENST00000410062 SMIM17P0DL12 118 aa16.35■□□□□ 0.21
UBE2E3-202ENST00000410062 CT83Q5H943 113 aa16.35■□□□□ 0.21
UBE2E3-202ENST00000410062 RAB4BP61018 213 aa16.34■□□□□ 0.21
UBE2E3-202ENST00000410062 ATP6V0E2Q8NHE4 81 aa16.34■□□□□ 0.21
UBE2E3-202ENST00000410062 F5H697 171 aa16.34■□□□□ 0.21
UBE2E3-202ENST00000410062 LINC00694P0DN24 101 aa16.34■□□□□ 0.21
UBE2E3-202ENST00000410062 C15orf54Q8N8G6 183 aa16.34■□□□□ 0.21
UBE2E3-202ENST00000410062 FRAS1Q86XX4 4008 aa16.33■□□□□ 0.21
UBE2E3-202ENST00000410062 EVI2AP22794 236 aa16.33■□□□□ 0.2
UBE2E3-202ENST00000410062 LINC00315P59091 139 aa16.33■□□□□ 0.2
UBE2E3-202ENST00000410062 TWIST1Q15672 202 aa16.33■□□□□ 0.2
UBE2E3-202ENST00000410062 WDR73Q6P4I2 378 aa16.33■□□□□ 0.2
UBE2E3-202ENST00000410062 PGLYRP4Q96LB8 373 aa16.33■□□□□ 0.2
UBE2E3-202ENST00000410062 CNFNQ9BYD5 112 aa16.33■□□□□ 0.2
UBE2E3-202ENST00000410062 SIVA1O15304 175 aa16.32■□□□□ 0.2
UBE2E3-202ENST00000410062 TSKUQ8WUA8 353 aa16.32■□□□□ 0.2
UBE2E3-202ENST00000410062 V9GYV3 84 aa16.32■□□□□ 0.2
UBE2E3-202ENST00000410062 MGPP08493 103 aa16.31■□□□□ 0.2
UBE2E3-202ENST00000410062 TRGC1P0CF51 173 aa16.31■□□□□ 0.2
UBE2E3-202ENST00000410062 WFDC10BQ8IUB3 73 aa16.31■□□□□ 0.2
UBE2E3-202ENST00000410062 TIRAPP58753 221 aa16.3■□□□□ 0.2
UBE2E3-202ENST00000410062 GTSF1LQ9H1H1 148 aa16.3■□□□□ 0.2
UBE2E3-202ENST00000410062 TRBV10-1A0A0K0K1A3 114 aa16.3■□□□□ 0.2
UBE2E3-202ENST00000410062 FOXA3P55318 350 aaPredicted RBP16.3■□□□□ 0.2
UBE2E3-202ENST00000410062 OR10G8Q8NGN5 311 aa16.3■□□□□ 0.2
UBE2E3-202ENST00000410062 KRTAP1-5Q9BYS1 174 aa16.3■□□□□ 0.2
UBE2E3-202ENST00000410062 HIGD1CA8MV81 97 aa16.29■□□□□ 0.2
UBE2E3-202ENST00000410062 RPL36AP83881 106 aaKnown RBP16.28■□□□□ 0.2
UBE2E3-202ENST00000410062 NEXN-AS1Q8NBZ9 246 aa16.28■□□□□ 0.2
UBE2E3-202ENST00000410062 RPL36ALQ969Q0 106 aaKnown RBP16.28■□□□□ 0.2
UBE2E3-202ENST00000410062 GFRA4Q9GZZ7 299 aa16.28■□□□□ 0.2
UBE2E3-202ENST00000410062 DPH3P1Q9H4G8 78 aa16.28■□□□□ 0.2
UBE2E3-202ENST00000410062 TRBV7-3A0A075B6L6 115 aa16.26■□□□□ 0.19
UBE2E3-202ENST00000410062 TTC32Q5I0X7 151 aa16.26■□□□□ 0.19
UBE2E3-202ENST00000410062 OR10J3Q5JRS4 329 aa16.26■□□□□ 0.19
UBE2E3-202ENST00000410062 FAM231BA6NCW3 169 aa16.26■□□□□ 0.19
UBE2E3-202ENST00000410062 RTL8CO15255 209 aa16.26■□□□□ 0.19
UBE2E3-202ENST00000410062 LELP1Q5T871 98 aa16.26■□□□□ 0.19
UBE2E3-202ENST00000410062 C1orf134Q5TEV5 83 aa16.26■□□□□ 0.19
UBE2E3-202ENST00000410062 SUMO4Q6EEV6 95 aa16.26■□□□□ 0.19
UBE2E3-202ENST00000410062 EPPK1P58107 5090 aaKnown RBP16.25■□□□□ 0.19
UBE2E3-202ENST00000410062 UBE2D3P61077 147 aa16.25■□□□□ 0.19
UBE2E3-202ENST00000410062 UBE2D2P62837 147 aa16.25■□□□□ 0.19
UBE2E3-202ENST00000410062 BORCS7Q96B45 105 aa16.25■□□□□ 0.19
UBE2E3-202ENST00000410062 TRAV8-6A0A0B4J262 113 aa16.24■□□□□ 0.19
UBE2E3-202ENST00000410062 A0A1B0GUT8 65 aa16.23■□□□□ 0.19
UBE2E3-202ENST00000410062 M0QY20 66 aa16.23■□□□□ 0.19
UBE2E3-202ENST00000410062 NUP35Q8NFH5 326 aa16.23■□□□□ 0.19
UBE2E3-202ENST00000410062 C6orf223Q8N319 242 aa16.22■□□□□ 0.19
UBE2E3-202ENST00000410062 FAT2Q9NYQ8 4349 aa16.22■□□□□ 0.19
UBE2E3-202ENST00000410062 IGHV3-38A0A0C4DH36 116 aa16.21■□□□□ 0.19
UBE2E3-202ENST00000410062 DNAH10OSP0CZ25 163 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms