RNA–Protein interactions for RNA: ENST00000409252.6

SH3D19-202, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SH3D19, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-202ENST00000409252 MRPL51Q4U2R6 128 aaKnown RBP6.27□□□□□ -1.41
SH3D19-202ENST00000409252 TET2Q6N021 2002 aaPredicted RBP6.27□□□□□ -1.41
SH3D19-202ENST00000409252 LINC01549A6NIU2 74 aa6.27□□□□□ -1.41
SH3D19-202ENST00000409252 FRMD6-AS1P0C7T7 363 aa6.27□□□□□ -1.41
SH3D19-202ENST00000409252 NEGR1Q7Z3B1 354 aa6.26□□□□□ -1.41
SH3D19-202ENST00000409252 NIT1Q86X76 327 aa6.26□□□□□ -1.41
SH3D19-202ENST00000409252 IGHV4-28A0A0C4DH34 117 aa6.26□□□□□ -1.41
SH3D19-202ENST00000409252 LYRM9A8MSI8 78 aa6.26□□□□□ -1.41
SH3D19-202ENST00000409252 PMCHL1Q16048 86 aa6.26□□□□□ -1.41
SH3D19-202ENST00000409252 TEX43Q6ZNM6 134 aa6.26□□□□□ -1.41
SH3D19-202ENST00000409252 TP53TG3Q9ULZ0 132 aa6.26□□□□□ -1.41
SH3D19-202ENST00000409252 HHLA3Q9XRX5 114 aa6.26□□□□□ -1.41
SH3D19-202ENST00000409252 FRYLO94915 3013 aa6.26□□□□□ -1.41
SH3D19-202ENST00000409252 ZNF80P51504 273 aaPredicted RBP6.26□□□□□ -1.41
SH3D19-202ENST00000409252 Q6ZTI0 123 aa6.26□□□□□ -1.41
SH3D19-202ENST00000409252 CHCHD1Q96BP2 118 aaKnown RBP6.26□□□□□ -1.41
SH3D19-202ENST00000409252 TRAV13-1A0A0B4J241 112 aa6.25□□□□□ -1.41
SH3D19-202ENST00000409252 SS18Q15532 418 aa6.25□□□□□ -1.41
SH3D19-202ENST00000409252 SH2D6Q7Z4S9 175 aa6.25□□□□□ -1.41
SH3D19-202ENST00000409252 ATP6V0E2Q8NHE4 81 aa6.25□□□□□ -1.41
SH3D19-202ENST00000409252 IGHV1-24A0A0C4DH33 117 aa6.25□□□□□ -1.41
SH3D19-202ENST00000409252 MED14OSP0DP75 135 aa6.25□□□□□ -1.41
SH3D19-202ENST00000409252 SRSF9Q13242 221 aaKnown RBP eCLIP6.25□□□□□ -1.41
SH3D19-202ENST00000409252 KIR3DS1Q14943 382 aa6.25□□□□□ -1.41
SH3D19-202ENST00000409252 PET117Q6UWS5 81 aa6.25□□□□□ -1.41
SH3D19-202ENST00000409252 FHL3Q13643 280 aa6.25□□□□□ -1.41
SH3D19-202ENST00000409252 LINC00469Q8N7U9 141 aa6.25□□□□□ -1.41
SH3D19-202ENST00000409252 DEFB131BA0A096LNP1 70 aa6.24□□□□□ -1.41
SH3D19-202ENST00000409252 CRXO43186 299 aaPredicted RBP6.24□□□□□ -1.41
SH3D19-202ENST00000409252 SUMO4Q6EEV6 95 aa6.24□□□□□ -1.41
SH3D19-202ENST00000409252 ZFAND2AQ8N6M9 145 aa6.24□□□□□ -1.41
SH3D19-202ENST00000409252 RMI2Q96E14 147 aa6.24□□□□□ -1.41
SH3D19-202ENST00000409252 Q6ZQT7 251 aa6.24□□□□□ -1.41
SH3D19-202ENST00000409252 RETNQ9HD89 108 aa6.24□□□□□ -1.41
SH3D19-202ENST00000409252 DMXL2Q8TDJ6 3036 aa6.24□□□□□ -1.41
SH3D19-202ENST00000409252 TRAV4A0A0B4J268 109 aa6.24□□□□□ -1.41
SH3D19-202ENST00000409252 ANGP03950 147 aaKnown RBP6.24□□□□□ -1.41
SH3D19-202ENST00000409252 MSRB1Q9NZV6 116 aa6.24□□□□□ -1.41
SH3D19-202ENST00000409252 PRO0255Q9UI72 69 aa6.24□□□□□ -1.41
SH3D19-202ENST00000409252 GCSHP23434 173 aa6.24□□□□□ -1.41
SH3D19-202ENST00000409252 CIRBPQ14011 172 aaKnown RBP6.24□□□□□ -1.41
SH3D19-202ENST00000409252 C11orf68Q9H3H3 251 aaKnown RBP6.24□□□□□ -1.41
SH3D19-202ENST00000409252 TP53TG1Q9Y2A0 90 aa6.24□□□□□ -1.41
SH3D19-202ENST00000409252 CHTOPQ9Y3Y2 248 aaKnown RBP6.23□□□□□ -1.41
SH3D19-202ENST00000409252 EREGO14944 169 aa6.23□□□□□ -1.41
SH3D19-202ENST00000409252 IFI27L1Q96BM0 104 aa6.23□□□□□ -1.41
SH3D19-202ENST00000409252 PAM16Q9Y3D7 125 aa6.23□□□□□ -1.41
SH3D19-202ENST00000409252 SORL1Q92673 2214 aa6.23□□□□□ -1.41
SH3D19-202ENST00000409252 NPYP01303 97 aa6.23□□□□□ -1.41
SH3D19-202ENST00000409252 HOXA5P20719 270 aa6.23□□□□□ -1.41
SH3D19-202ENST00000409252 Q8N8P6 123 aa6.23□□□□□ -1.41
SH3D19-202ENST00000409252 NDUFAF3Q9BU61 184 aa6.23□□□□□ -1.41
SH3D19-202ENST00000409252 TRAV26-1A0A087WT03 109 aa6.22□□□□□ -1.41
SH3D19-202ENST00000409252 CLPSL2Q6UWE3 100 aa6.22□□□□□ -1.41
SH3D19-202ENST00000409252 ATOH7Q8N100 152 aa6.22□□□□□ -1.41
SH3D19-202ENST00000409252 SMIM2Q9BVW6 85 aa6.22□□□□□ -1.41
SH3D19-202ENST00000409252 UNC79Q9P2D8 2635 aa6.22□□□□□ -1.41
SH3D19-202ENST00000409252 COLCA2A8K830 154 aa6.22□□□□□ -1.41
SH3D19-202ENST00000409252 DNAJC30Q96LL9 226 aa6.22□□□□□ -1.41
SH3D19-202ENST00000409252 Q9HAA7 133 aa6.22□□□□□ -1.41
SH3D19-202ENST00000409252 A0A0J9YWU9 116 aa6.22□□□□□ -1.41
SH3D19-202ENST00000409252 M0R143 59 aa6.22□□□□□ -1.41
SH3D19-202ENST00000409252 MRPS12O15235 138 aaKnown RBP6.22□□□□□ -1.41
SH3D19-202ENST00000409252 CELSR3Q9NYQ7 3312 aa6.22□□□□□ -1.41
SH3D19-202ENST00000409252 HIST1H2BKO60814 126 aa6.22□□□□□ -1.41
SH3D19-202ENST00000409252 HIST1H2BJP06899 126 aa6.22□□□□□ -1.41
SH3D19-202ENST00000409252 HIST1H2BOP23527 126 aa6.22□□□□□ -1.41
SH3D19-202ENST00000409252 HIST1H2BBP33778 126 aa6.22□□□□□ -1.41
SH3D19-202ENST00000409252 HIST1H2BDP58876 126 aa6.22□□□□□ -1.41
SH3D19-202ENST00000409252 HIST1H2BCP62807 126 aa6.22□□□□□ -1.41
SH3D19-202ENST00000409252 SEC11AP67812 179 aa6.22□□□□□ -1.41
SH3D19-202ENST00000409252 RPL24P83731 157 aaKnown RBP6.22□□□□□ -1.41
SH3D19-202ENST00000409252 HIST2H2BEQ16778 126 aa6.22□□□□□ -1.41
SH3D19-202ENST00000409252 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.22□□□□□ -1.41
SH3D19-202ENST00000409252 Q6ZWC4 215 aa6.22□□□□□ -1.41
SH3D19-202ENST00000409252 HIST1H2BHQ93079 126 aa6.22□□□□□ -1.41
SH3D19-202ENST00000409252 HIST1H2BNQ99877 126 aa6.22□□□□□ -1.41
SH3D19-202ENST00000409252 HIST1H2BMQ99879 126 aa6.22□□□□□ -1.41
SH3D19-202ENST00000409252 C2orf66Q6UXQ4 117 aa6.21□□□□□ -1.41
SH3D19-202ENST00000409252 C20orf78Q9BR46 151 aa6.21□□□□□ -1.41
SH3D19-202ENST00000409252 TRAV10A0A0B4J240 114 aa6.21□□□□□ -1.42
SH3D19-202ENST00000409252 C19orf71A6NCJ1 209 aa6.21□□□□□ -1.42
SH3D19-202ENST00000409252 IGHV3-30P01768 117 aa6.21□□□□□ -1.42
SH3D19-202ENST00000409252 IGHV3-33P01772 117 aa6.21□□□□□ -1.42
SH3D19-202ENST00000409252 IGHV3-30-3P0DP02 117 aa6.21□□□□□ -1.42
SH3D19-202ENST00000409252 IGHV3-30-5P0DP03 117 aa6.21□□□□□ -1.42
SH3D19-202ENST00000409252 CTRLP40313 264 aa6.21□□□□□ -1.42
SH3D19-202ENST00000409252 GTSF1Q8WW33 167 aa6.21□□□□□ -1.42
SH3D19-202ENST00000409252 PMCHL2Q9BQD1 86 aa6.21□□□□□ -1.42
SH3D19-202ENST00000409252 DSCAML1Q8TD84 2053 aa6.21□□□□□ -1.42
SH3D19-202ENST00000409252 IGKV2D-24A0A075B6R9 120 aa6.21□□□□□ -1.42
SH3D19-202ENST00000409252 APOMO95445 188 aa6.21□□□□□ -1.42
SH3D19-202ENST00000409252 CKS1BP61024 79 aa6.21□□□□□ -1.42
SH3D19-202ENST00000409252 ZFAND6Q6FIF0 208 aa6.21□□□□□ -1.42
SH3D19-202ENST00000409252 PRIMA1Q86XR5 153 aa6.21□□□□□ -1.42
SH3D19-202ENST00000409252 RPL39LQ96EH5 51 aaKnown RBP6.21□□□□□ -1.42
SH3D19-202ENST00000409252 C12orf57Q99622 126 aa6.21□□□□□ -1.42
SH3D19-202ENST00000409252 JPT2Q9H910 190 aa6.21□□□□□ -1.42
SH3D19-202ENST00000409252 IGHV3-64A0A075B6Q5 118 aa6.21□□□□□ -1.42
SH3D19-202ENST00000409252 PSMB2P49721 201 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms