RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 TMSB15BA0A087X1C1 80 aa9.03□□□□□ -0.96
VCX3A-202ENST00000398729 IBA57-AS1B1ANH7 110 aa9.03□□□□□ -0.96
VCX3A-202ENST00000398729 FAM74A4Q5TZK3 123 aa9.03□□□□□ -0.96
VCX3A-202ENST00000398729 UFSP1Q6NVU6 142 aa9.03□□□□□ -0.96
VCX3A-202ENST00000398729 TMUB2Q71RG4 321 aa9.03□□□□□ -0.96
VCX3A-202ENST00000398729 SCO2A0A1W2PP80 73 aa9.02□□□□□ -0.97
VCX3A-202ENST00000398729 M0R381 172 aa9.02□□□□□ -0.97
VCX3A-202ENST00000398729 PSCAO43653 123 aa9.02□□□□□ -0.97
VCX3A-202ENST00000398729 IGHV3-30P01768 117 aa9.02□□□□□ -0.97
VCX3A-202ENST00000398729 IGHV3-33P01772 117 aa9.02□□□□□ -0.97
VCX3A-202ENST00000398729 IGHV3-30-3P0DP02 117 aa9.02□□□□□ -0.97
VCX3A-202ENST00000398729 IGHV3-30-5P0DP03 117 aa9.02□□□□□ -0.97
VCX3A-202ENST00000398729 ZFP82Q8N141 532 aa9.02□□□□□ -0.97
VCX3A-202ENST00000398729 LINC00694P0DN24 101 aa9.01□□□□□ -0.97
VCX3A-202ENST00000398729 FUSP35637 526 aaKnown RBP eCLIP9.01□□□□□ -0.97
VCX3A-202ENST00000398729 BAGE2Q86Y30 109 aa9.01□□□□□ -0.97
VCX3A-202ENST00000398729 C14orf178Q8N769 122 aaPredicted RBP9.01□□□□□ -0.97
VCX3A-202ENST00000398729 SFRP2Q96HF1 295 aa9.01□□□□□ -0.97
VCX3A-202ENST00000398729 A0A087WWC5 75 aa9□□□□□ -0.97
VCX3A-202ENST00000398729 A0A087WWL8 130 aa9□□□□□ -0.97
VCX3A-202ENST00000398729 RAB5CP51148 216 aa9□□□□□ -0.97
VCX3A-202ENST00000398729 EIF5AL1Q6IS14 154 aaKnown RBP9□□□□□ -0.97
VCX3A-202ENST00000398729 Q9HAA7 133 aa9□□□□□ -0.97
VCX3A-202ENST00000398729 MANBALQ9NQG1 85 aa9□□□□□ -0.97
VCX3A-202ENST00000398729 Q9UF83 564 aa9□□□□□ -0.97
VCX3A-202ENST00000398729 EPM2AB3EWF7 344 aa8.99□□□□□ -0.97
VCX3A-202ENST00000398729 TEX46H3BTG2 121 aa8.99□□□□□ -0.97
VCX3A-202ENST00000398729 CXCL1P09341 107 aa8.99□□□□□ -0.97
VCX3A-202ENST00000398729 INAFM2P0DMQ5 153 aa8.99□□□□□ -0.97
VCX3A-202ENST00000398729 LAGE3Q14657 143 aa8.99□□□□□ -0.97
VCX3A-202ENST00000398729 MLST8Q9BVC4 326 aa8.99□□□□□ -0.97
VCX3A-202ENST00000398729 GNG13Q9P2W3 67 aa8.99□□□□□ -0.97
VCX3A-202ENST00000398729 TRAV1-1A0A0B4J248 108 aa8.98□□□□□ -0.97
VCX3A-202ENST00000398729 RPL19P84098 196 aaKnown RBP8.98□□□□□ -0.97
VCX3A-202ENST00000398729 PRR27Q6MZM9 219 aa8.98□□□□□ -0.97
VCX3A-202ENST00000398729 UBR4Q5T4S7 5183 aa8.97□□□□□ -0.97
VCX3A-202ENST00000398729 TRBV10-1A0A0K0K1A3 114 aa8.97□□□□□ -0.97
VCX3A-202ENST00000398729 RPL35P42766 123 aaKnown RBP8.97□□□□□ -0.97
VCX3A-202ENST00000398729 CCL20P78556 96 aa8.97□□□□□ -0.97
VCX3A-202ENST00000398729 TCTE3Q8IZS6 198 aa8.97□□□□□ -0.97
VCX3A-202ENST00000398729 TM2D2Q9BX73 214 aa8.97□□□□□ -0.97
VCX3A-202ENST00000398729 LRCOL1A6NCL2 159 aa8.96□□□□□ -0.98
VCX3A-202ENST00000398729 GCSHP23434 173 aa8.96□□□□□ -0.98
VCX3A-202ENST00000398729 SULT1A2P50226 295 aa8.96□□□□□ -0.98
VCX3A-202ENST00000398729 XGP55808 180 aa8.96□□□□□ -0.98
VCX3A-202ENST00000398729 RPL36AP83881 106 aaKnown RBP8.96□□□□□ -0.98
VCX3A-202ENST00000398729 TOR2AQ5JU69 321 aa8.96□□□□□ -0.98
VCX3A-202ENST00000398729 Q8N3U1 123 aa8.96□□□□□ -0.98
VCX3A-202ENST00000398729 OR10AG1Q8NH19 301 aa8.96□□□□□ -0.98
VCX3A-202ENST00000398729 RPL36ALQ969Q0 106 aaKnown RBP8.96□□□□□ -0.98
VCX3A-202ENST00000398729 C11orf52Q96A22 123 aa8.96□□□□□ -0.98
VCX3A-202ENST00000398729 URGCP-MRPS24S4R325 110 aa8.96□□□□□ -0.98
VCX3A-202ENST00000398729 TRBV7-3A0A075B6L6 115 aa8.95□□□□□ -0.98
VCX3A-202ENST00000398729 TRAV8-3A0A0A6YYJ7 113 aa8.95□□□□□ -0.98
VCX3A-202ENST00000398729 SNAI2O43623 268 aa8.95□□□□□ -0.98
VCX3A-202ENST00000398729 OR5AL1P0C617 328 aa8.95□□□□□ -0.98
VCX3A-202ENST00000398729 RAB4BP61018 213 aa8.95□□□□□ -0.98
VCX3A-202ENST00000398729 SPANXN1Q5VSR9 72 aa8.95□□□□□ -0.98
VCX3A-202ENST00000398729 DAZ4Q86SG3 579 aaKnown RBP8.95□□□□□ -0.98
VCX3A-202ENST00000398729 NTN5Q8WTR8 489 aaPredicted RBP8.95□□□□□ -0.98
VCX3A-202ENST00000398729 DERL1Q9BUN8 251 aa8.95□□□□□ -0.98
VCX3A-202ENST00000398729 SSBP4Q9BWG4 385 aaPredicted RBP8.95□□□□□ -0.98
VCX3A-202ENST00000398729 DAZ3Q9NR90 486 aaKnown RBP8.95□□□□□ -0.98
VCX3A-202ENST00000398729 IGLV5-52A0A0A0MRZ9 124 aa8.94□□□□□ -0.98
VCX3A-202ENST00000398729 KRTAP10-1P60331 282 aa8.94□□□□□ -0.98
VCX3A-202ENST00000398729 ZNF56Q15929 161 aa8.94□□□□□ -0.98
VCX3A-202ENST00000398729 IFNA1P01562 189 aa8.93□□□□□ -0.98
VCX3A-202ENST00000398729 C1QBP02746 253 aa8.93□□□□□ -0.98
VCX3A-202ENST00000398729 UBE2D3P61077 147 aa8.93□□□□□ -0.98
VCX3A-202ENST00000398729 UBE2D2P62837 147 aa8.93□□□□□ -0.98
VCX3A-202ENST00000398729 MEF2BQ02080 365 aaPredicted RBP8.93□□□□□ -0.98
VCX3A-202ENST00000398729 CENPWQ5EE01 88 aa8.93□□□□□ -0.98
VCX3A-202ENST00000398729 KCNIP4Q6PIL6 250 aa8.93□□□□□ -0.98
VCX3A-202ENST00000398729 SLC51BQ86UW2 128 aa8.93□□□□□ -0.98
VCX3A-202ENST00000398729 NIT1Q86X76 327 aa8.93□□□□□ -0.98
VCX3A-202ENST00000398729 Q8N814 137 aa8.93□□□□□ -0.98
VCX3A-202ENST00000398729 OR10G8Q8NGN5 311 aa8.93□□□□□ -0.98
VCX3A-202ENST00000398729 DAZAP1Q96EP5 407 aaKnown RBP8.93□□□□□ -0.98
VCX3A-202ENST00000398729 A0A087WX48 190 aa8.92□□□□□ -0.98
VCX3A-202ENST00000398729 MUC21A0A0G2JKD1 596 aa8.92□□□□□ -0.98
VCX3A-202ENST00000398729 MUC21A0A140T8X8 626 aa8.92□□□□□ -0.98
VCX3A-202ENST00000398729 PDE6DO43924 150 aa8.92□□□□□ -0.98
VCX3A-202ENST00000398729 SMIM17P0DL12 118 aa8.92□□□□□ -0.98
VCX3A-202ENST00000398729 SSTP61278 116 aa8.92□□□□□ -0.98
VCX3A-202ENST00000398729 SMIM12Q96EX1 92 aa8.92□□□□□ -0.98
VCX3A-202ENST00000398729 COX11Q9Y6N1 276 aa8.92□□□□□ -0.98
VCX3A-202ENST00000398729 DNAH8Q96JB1 4490 aa8.92□□□□□ -0.98
VCX3A-202ENST00000398729 F5H697 171 aa8.91□□□□□ -0.98
VCX3A-202ENST00000398729 GNG4P50150 75 aa8.91□□□□□ -0.98
VCX3A-202ENST00000398729 RPS20P60866 119 aaKnown RBP8.91□□□□□ -0.98
VCX3A-202ENST00000398729 ELOBQ15370 118 aa8.91□□□□□ -0.98
VCX3A-202ENST00000398729 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.91□□□□□ -0.98
VCX3A-202ENST00000398729 NEXN-AS1Q8NBZ9 246 aa8.91□□□□□ -0.98
VCX3A-202ENST00000398729 RMI2Q96E14 147 aa8.91□□□□□ -0.98
VCX3A-202ENST00000398729 AP1S3Q96PC3 154 aa8.91□□□□□ -0.98
VCX3A-202ENST00000398729 CHCHD7Q9BUK0 85 aa8.91□□□□□ -0.98
VCX3A-202ENST00000398729 RAB19A4D1S5 217 aa8.9□□□□□ -0.98
VCX3A-202ENST00000398729 IGLV2-8P01709 118 aa8.9□□□□□ -0.98
VCX3A-202ENST00000398729 BCL2P10415 239 aa8.9□□□□□ -0.98
VCX3A-202ENST00000398729 Q5VSD8 79 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms