RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 BLOC1S1P78537 153 aa11.34□□□□□ -0.59
APTR-201ENST00000398043 ZFP82Q8N141 532 aa11.34□□□□□ -0.59
APTR-201ENST00000398043 C14orf178Q8N769 122 aaPredicted RBP11.34□□□□□ -0.59
APTR-201ENST00000398043 OR10AG1Q8NH19 301 aa11.34□□□□□ -0.59
APTR-201ENST00000398043 MED9Q9NWA0 146 aa11.34□□□□□ -0.59
APTR-201ENST00000398043 GNG4P50150 75 aa11.33□□□□□ -0.6
APTR-201ENST00000398043 A0A087WWL8 130 aa11.32□□□□□ -0.6
APTR-201ENST00000398043 ATP6V0E2Q8NHE4 81 aa11.32□□□□□ -0.6
APTR-201ENST00000398043 LY96Q9Y6Y9 160 aa11.32□□□□□ -0.6
APTR-201ENST00000398043 K7EP13 123 aa11.31□□□□□ -0.6
APTR-201ENST00000398043 IGLC6P0CF74 106 aa11.31□□□□□ -0.6
APTR-201ENST00000398043 GTSF1LQ9H1H1 148 aa11.31□□□□□ -0.6
APTR-201ENST00000398043 TNFRSF18Q9Y5U5 241 aa11.31□□□□□ -0.6
APTR-201ENST00000398043 KIAA1109Q2LD37 5005 aa11.3□□□□□ -0.6
APTR-201ENST00000398043 RBFOX3A6NFN3 312 aa11.3□□□□□ -0.6
APTR-201ENST00000398043 LELP1Q5T871 98 aa11.3□□□□□ -0.6
APTR-201ENST00000398043 FAM74A4Q5TZK3 123 aa11.3□□□□□ -0.6
APTR-201ENST00000398043 DNAH11Q96DT5 4516 aa11.3□□□□□ -0.6
APTR-201ENST00000398043 DYNC1H1Q14204 4646 aaKnown RBP11.3□□□□□ -0.6
APTR-201ENST00000398043 GAGE12JA6NER3 117 aa11.29□□□□□ -0.6
APTR-201ENST00000398043 TMEM250H0YL14 139 aa11.29□□□□□ -0.6
APTR-201ENST00000398043 GZMBP10144 247 aa11.29□□□□□ -0.6
APTR-201ENST00000398043 GAGE1Q13065 139 aa11.29□□□□□ -0.6
APTR-201ENST00000398043 GAGE4Q13068 117 aa11.29□□□□□ -0.6
APTR-201ENST00000398043 GAGE5Q13069 117 aa11.29□□□□□ -0.6
APTR-201ENST00000398043 GAGE13Q4V321 117 aa11.29□□□□□ -0.6
APTR-201ENST00000398043 LINC01556Q5JQF7 62 aa11.29□□□□□ -0.6
APTR-201ENST00000398043 KIF25-AS1Q9Y6Z4 181 aa11.29□□□□□ -0.6
APTR-201ENST00000398043 IGHV3-38A0A0C4DH36 116 aa11.28□□□□□ -0.6
APTR-201ENST00000398043 MUC21A0A0G2JKD1 596 aa11.28□□□□□ -0.6
APTR-201ENST00000398043 MUC21A0A140T8X8 626 aa11.28□□□□□ -0.6
APTR-201ENST00000398043 K7EN84 100 aa11.28□□□□□ -0.6
APTR-201ENST00000398043 OR2D3Q8NGH3 330 aa11.28□□□□□ -0.6
APTR-201ENST00000398043 OCC1Q8TAD7 63 aa11.28□□□□□ -0.6
APTR-201ENST00000398043 TRAV9-2A0A087WT02 112 aa11.27□□□□□ -0.61
APTR-201ENST00000398043 EVI2AP22794 236 aa11.27□□□□□ -0.61
APTR-201ENST00000398043 RPS20P60866 119 aaKnown RBP11.27□□□□□ -0.61
APTR-201ENST00000398043 BIN3Q9NQY0 253 aa11.27□□□□□ -0.61
APTR-201ENST00000398043 TRBV10-1A0A0K0K1A3 114 aa11.26□□□□□ -0.61
APTR-201ENST00000398043 NDUFS6O75380 124 aaKnown RBP11.26□□□□□ -0.61
APTR-201ENST00000398043 RAB4BP61018 213 aa11.26□□□□□ -0.61
APTR-201ENST00000398043 SPANXN1Q5VSR9 72 aa11.26□□□□□ -0.61
APTR-201ENST00000398043 FER1L6-AS1Q8NA97 138 aa11.26□□□□□ -0.61
APTR-201ENST00000398043 NUDT10Q8NFP7 164 aa11.26□□□□□ -0.61
APTR-201ENST00000398043 DAZAP1Q96EP5 407 aaKnown RBP11.26□□□□□ -0.61
APTR-201ENST00000398043 NUDT11Q96G61 164 aa11.26□□□□□ -0.61
APTR-201ENST00000398043 MSRB1Q9NZV6 116 aa11.26□□□□□ -0.61
APTR-201ENST00000398043 TRAV8-6A0A0B4J262 113 aa11.25□□□□□ -0.61
APTR-201ENST00000398043 P01737 135 aa11.25□□□□□ -0.61
APTR-201ENST00000398043 OR10J3Q5JRS4 329 aa11.25□□□□□ -0.61
APTR-201ENST00000398043 OR10G8Q8NGN5 311 aa11.25□□□□□ -0.61
APTR-201ENST00000398043 HERC2O95714 4834 aa11.25□□□□□ -0.61
APTR-201ENST00000398043 UBE2D3P61077 147 aa11.24□□□□□ -0.61
APTR-201ENST00000398043 UBE2D2P62837 147 aa11.24□□□□□ -0.61
APTR-201ENST00000398043 TOR2AQ5JU69 321 aa11.24□□□□□ -0.61
APTR-201ENST00000398043 NFE4Q86UQ8 179 aa11.24□□□□□ -0.61
APTR-201ENST00000398043 C10orf126Q8N4M7 172 aa11.24□□□□□ -0.61
APTR-201ENST00000398043 FAM210AQ96ND0 272 aa11.24□□□□□ -0.61
APTR-201ENST00000398043 TRBV7-3A0A075B6L6 115 aa11.23□□□□□ -0.61
APTR-201ENST00000398043 IBA57-AS1B1ANH7 110 aa11.23□□□□□ -0.61
APTR-201ENST00000398043 KRTAP10-2P60368 255 aa11.23□□□□□ -0.61
APTR-201ENST00000398043 Q8N3U1 123 aa11.23□□□□□ -0.61
APTR-201ENST00000398043 A0A087WWC5 75 aa11.22□□□□□ -0.61
APTR-201ENST00000398043 XKRY2A2RUG3 117 aa11.22□□□□□ -0.61
APTR-201ENST00000398043 F2Z2F3 143 aa11.22□□□□□ -0.61
APTR-201ENST00000398043 CTRLP40313 264 aa11.22□□□□□ -0.61
APTR-201ENST00000398043 SSTP61278 116 aa11.22□□□□□ -0.61
APTR-201ENST00000398043 CACNG7P62955 275 aa11.22□□□□□ -0.61
APTR-201ENST00000398043 ZNF56Q15929 161 aa11.22□□□□□ -0.61
APTR-201ENST00000398043 LYZL1Q6UWQ5 148 aa11.22□□□□□ -0.61
APTR-201ENST00000398043 NEXN-AS1Q8NBZ9 246 aa11.22□□□□□ -0.61
APTR-201ENST00000398043 AP1S3Q96PC3 154 aa11.22□□□□□ -0.61
APTR-201ENST00000398043 CNFNQ9BYD5 112 aa11.22□□□□□ -0.61
APTR-201ENST00000398043 RNASE7Q9H1E1 156 aaKnown RBP11.22□□□□□ -0.61
APTR-201ENST00000398043 SRP19P09132 144 aaKnown RBP11.21□□□□□ -0.61
APTR-201ENST00000398043 RPL36AP83881 106 aaKnown RBP11.21□□□□□ -0.61
APTR-201ENST00000398043 WDR73Q6P4I2 378 aa11.21□□□□□ -0.61
APTR-201ENST00000398043 TEX261Q6UWH6 196 aa11.21□□□□□ -0.61
APTR-201ENST00000398043 SPATA12Q7Z6I5 190 aa11.21□□□□□ -0.61
APTR-201ENST00000398043 RPL36ALQ969Q0 106 aaKnown RBP11.21□□□□□ -0.61
APTR-201ENST00000398043 RPP21Q9H633 154 aaKnown RBP11.21□□□□□ -0.61
APTR-201ENST00000398043 IGHV3-30P01768 117 aa11.2□□□□□ -0.62
APTR-201ENST00000398043 IGHV3-33P01772 117 aa11.2□□□□□ -0.62
APTR-201ENST00000398043 IGHV3-30-3P0DP02 117 aa11.2□□□□□ -0.62
APTR-201ENST00000398043 IGHV3-30-5P0DP03 117 aa11.2□□□□□ -0.62
APTR-201ENST00000398043 FAM231DQ6ZW35 169 aa11.2□□□□□ -0.62
APTR-201ENST00000398043 TPPP3Q9BW30 176 aa11.2□□□□□ -0.62
APTR-201ENST00000398043 EIF5A2Q9GZV4 153 aaKnown RBP11.2□□□□□ -0.62
APTR-201ENST00000398043 NTF3P20783 257 aa11.19□□□□□ -0.62
APTR-201ENST00000398043 GTSF1Q8WW33 167 aa11.19□□□□□ -0.62
APTR-201ENST00000398043 C16orf90A8MZG2 172 aa11.18□□□□□ -0.62
APTR-201ENST00000398043 M0QY20 66 aa11.18□□□□□ -0.62
APTR-201ENST00000398043 LAGE3Q14657 143 aa11.18□□□□□ -0.62
APTR-201ENST00000398043 NIT1Q86X76 327 aa11.18□□□□□ -0.62
APTR-201ENST00000398043 A0A087WTM6 91 aa11.17□□□□□ -0.62
APTR-201ENST00000398043 F5H697 171 aa11.17□□□□□ -0.62
APTR-201ENST00000398043 LINC01551Q86U37 167 aa11.17□□□□□ -0.62
APTR-201ENST00000398043 SMIM7Q9BQ49 75 aa11.17□□□□□ -0.62
APTR-201ENST00000398043 LRCOL1A6NCL2 159 aa11.16□□□□□ -0.62
APTR-201ENST00000398043 C9JQL5 133 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms