RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 LSM2Q9Y333 95 aaKnown RBP-0.19□□□□□ -2.44
CMC1-202ENST00000396610 UHRF1BP1LA0JNW5 1464 aa-0.19□□□□□ -2.44
CMC1-202ENST00000396610 WNK2Q9Y3S1 2297 aa-0.2□□□□□ -2.44
CMC1-202ENST00000396610 TRBV7-1A0A0A6YYK4 115 aa-0.2□□□□□ -2.44
CMC1-202ENST00000396610 CCDC179H3BU77 68 aa-0.2□□□□□ -2.44
CMC1-202ENST00000396610 J3QLW9 94 aa-0.2□□□□□ -2.44
CMC1-202ENST00000396610 M0R2P5 195 aa-0.2□□□□□ -2.44
CMC1-202ENST00000396610 DBIP07108 87 aaKnown RBP-0.2□□□□□ -2.44
CMC1-202ENST00000396610 NPC2P61916 151 aa-0.2□□□□□ -2.44
CMC1-202ENST00000396610 C20orf197Q8N268 126 aa-0.2□□□□□ -2.44
CMC1-202ENST00000396610 COX7B2Q8TF08 81 aa-0.2□□□□□ -2.44
CMC1-202ENST00000396610 TMEM242Q9NWH2 141 aa-0.2□□□□□ -2.44
CMC1-202ENST00000396610 DOCK11Q5JSL3 2073 aa-0.21□□□□□ -2.44
CMC1-202ENST00000396610 FAM74A4Q5TZK3 123 aa-0.21□□□□□ -2.44
CMC1-202ENST00000396610 MRPL40Q9NQ50 206 aaKnown RBP-0.21□□□□□ -2.44
CMC1-202ENST00000396610 SPCS2Q15005 226 aa-0.22□□□□□ -2.44
CMC1-202ENST00000396610 SLC48A1Q6P1K1 146 aa-0.22□□□□□ -2.44
CMC1-202ENST00000396610 Q96NJ1 140 aa-0.22□□□□□ -2.44
CMC1-202ENST00000396610 V9GYV3 84 aa-0.22□□□□□ -2.44
CMC1-202ENST00000396610 FLNCQ14315 2725 aa-0.22□□□□□ -2.45
CMC1-202ENST00000396610 SPTBN2O15020 2390 aa-0.23□□□□□ -2.45
CMC1-202ENST00000396610 TRAV12-3A0A0B4J271 114 aa-0.23□□□□□ -2.45
CMC1-202ENST00000396610 IFITM1P13164 125 aa-0.23□□□□□ -2.45
CMC1-202ENST00000396610 NCS1P62166 190 aa-0.23□□□□□ -2.45
CMC1-202ENST00000396610 TAC4Q86UU9 113 aa-0.23□□□□□ -2.45
CMC1-202ENST00000396610 TRBV20-1A0A075B6N2 111 aa-0.24□□□□□ -2.45
CMC1-202ENST00000396610 ACYP2P14621 99 aa-0.24□□□□□ -2.45
CMC1-202ENST00000396610 Q6ZRX8 168 aa-0.24□□□□□ -2.45
CMC1-202ENST00000396610 MORN2Q502X0 79 aa-0.25□□□□□ -2.45
CMC1-202ENST00000396610 LINC01545Q5VT33 79 aa-0.25□□□□□ -2.45
CMC1-202ENST00000396610 MMGT1Q8N4V1 131 aa-0.25□□□□□ -2.45
CMC1-202ENST00000396610 NDUFA12Q9UI09 145 aa-0.25□□□□□ -2.45
CMC1-202ENST00000396610 PTPRMP28827 1452 aa-0.25□□□□□ -2.45
CMC1-202ENST00000396610 ARAP1Q96P48 1450 aa-0.25□□□□□ -2.45
CMC1-202ENST00000396610 DSTQ03001 7570 aaKnown RBP-0.25□□□□□ -2.45
CMC1-202ENST00000396610 UNC13BO14795 1591 aa-0.25□□□□□ -2.45
CMC1-202ENST00000396610 LAMC3Q9Y6N6 1575 aa-0.25□□□□□ -2.45
CMC1-202ENST00000396610 CACNA1AO00555 2505 aa-0.25□□□□□ -2.45
CMC1-202ENST00000396610 MAP2P11137 1827 aaKnown RBP-0.26□□□□□ -2.45
CMC1-202ENST00000396610 VIRMAQ69YN4 1812 aaKnown RBP-0.26□□□□□ -2.45
CMC1-202ENST00000396610 CASZ1Q86V15 1759 aa-0.26□□□□□ -2.45
CMC1-202ENST00000396610 B2MP61769 119 aa-0.26□□□□□ -2.45
CMC1-202ENST00000396610 SAR1AQ9NR31 198 aa-0.26□□□□□ -2.45
CMC1-202ENST00000396610 AKAP6Q13023 2319 aa-0.26□□□□□ -2.45
CMC1-202ENST00000396610 XIRP1Q702N8 1843 aaKnown RBP-0.27□□□□□ -2.45
CMC1-202ENST00000396610 KDM5CP41229 1560 aa-0.27□□□□□ -2.45
CMC1-202ENST00000396610 TRGV1A0A0A0MS02 117 aa-0.27□□□□□ -2.45
CMC1-202ENST00000396610 TMEM14DPA8MWL7 114 aa-0.27□□□□□ -2.45
CMC1-202ENST00000396610 GCHFRP30047 84 aa-0.27□□□□□ -2.45
CMC1-202ENST00000396610 INSL4Q14641 139 aa-0.27□□□□□ -2.45
CMC1-202ENST00000396610 AIF1LQ9BQI0 150 aa-0.27□□□□□ -2.45
CMC1-202ENST00000396610 TNS1Q9HBL0 1735 aaKnown RBP-0.27□□□□□ -2.45
CMC1-202ENST00000396610 ERCC6Q03468 1493 aa-0.28□□□□□ -2.45
CMC1-202ENST00000396610 PTPRQQ9UMZ3 2332 aa-0.28□□□□□ -2.45
CMC1-202ENST00000396610 SCP2D1Q9UJQ7 156 aa-0.28□□□□□ -2.45
CMC1-202ENST00000396610 SSC5DA1L4H1 1573 aa-0.28□□□□□ -2.45
CMC1-202ENST00000396610 FAM208BQ5VWN6 2430 aa-0.28□□□□□ -2.45
CMC1-202ENST00000396610 PTPN13Q12923 2485 aa-0.29□□□□□ -2.46
CMC1-202ENST00000396610 C10orf142B7Z368 130 aa-0.29□□□□□ -2.46
CMC1-202ENST00000396610 SCGB1A1P11684 91 aa-0.29□□□□□ -2.46
CMC1-202ENST00000396610 HIST1H1AQ02539 215 aaPredicted RBP-0.29□□□□□ -2.46
CMC1-202ENST00000396610 SPANXN1Q5VSR9 72 aa-0.29□□□□□ -2.46
CMC1-202ENST00000396610 MIC13Q5XKP0 118 aa-0.29□□□□□ -2.46
CMC1-202ENST00000396610 VSTM2AQ8TAG5 236 aa-0.29□□□□□ -2.46
CMC1-202ENST00000396610 BATF3Q9NR55 127 aa-0.29□□□□□ -2.46
CMC1-202ENST00000396610 NCOR1O75376 2440 aa-0.3□□□□□ -2.46
CMC1-202ENST00000396610 PIRTP0C851 137 aa-0.3□□□□□ -2.46
CMC1-202ENST00000396610 IGLC6P0CF74 106 aa-0.3□□□□□ -2.46
CMC1-202ENST00000396610 EDDM3BP56851 147 aa-0.3□□□□□ -2.46
CMC1-202ENST00000396610 RPRMQ9NS64 109 aa-0.3□□□□□ -2.46
CMC1-202ENST00000396610 ZNF292O60281 2723 aa-0.3□□□□□ -2.46
CMC1-202ENST00000396610 SYNJ1O43426 1573 aa-0.31□□□□□ -2.46
CMC1-202ENST00000396610 FAM236AA0A1B0GUQ0 79 aa-0.31□□□□□ -2.46
CMC1-202ENST00000396610 FAM236BA0A1B0GV22 79 aa-0.31□□□□□ -2.46
CMC1-202ENST00000396610 A6NIN4 97 aa-0.31□□□□□ -2.46
CMC1-202ENST00000396610 M0R129 80 aa-0.31□□□□□ -2.46
CMC1-202ENST00000396610 CFDP00746 253 aaPredicted RBP-0.31□□□□□ -2.46
CMC1-202ENST00000396610 C9orf116Q5BN46 136 aaPredicted RBP-0.31□□□□□ -2.46
CMC1-202ENST00000396610 RPL7L1Q6DKI1 246 aaKnown RBP-0.31□□□□□ -2.46
CMC1-202ENST00000396610 SSBP3-AS1Q7Z2R9 100 aa-0.31□□□□□ -2.46
CMC1-202ENST00000396610 UBE2DNLQ8IWF7 75 aa-0.31□□□□□ -2.46
CMC1-202ENST00000396610 PYDC1Q8WXC3 89 aa-0.31□□□□□ -2.46
CMC1-202ENST00000396610 PLXNA2O75051 1894 aa-0.31□□□□□ -2.46
CMC1-202ENST00000396610 KIF13AQ9H1H9 1805 aa-0.31□□□□□ -2.46
CMC1-202ENST00000396610 CSMD3Q7Z407 3707 aa-0.32□□□□□ -2.46
CMC1-202ENST00000396610 HMCN2Q8NDA2 5059 aa-0.32□□□□□ -2.46
CMC1-202ENST00000396610 ZNF815PA8K554 130 aa-0.33□□□□□ -2.46
CMC1-202ENST00000396610 J3QR89 54 aa-0.33□□□□□ -2.46
CMC1-202ENST00000396610 KRTAP6-1Q3LI64 71 aa-0.33□□□□□ -2.46
CMC1-202ENST00000396610 SMIM3Q9BZL3 60 aa-0.33□□□□□ -2.46
CMC1-202ENST00000396610 IBTKQ9P2D0 1353 aaPredicted RBP-0.33□□□□□ -2.46
CMC1-202ENST00000396610 LINC00694P0DN24 101 aa-0.34□□□□□ -2.46
CMC1-202ENST00000396610 CKS1BP61024 79 aa-0.34□□□□□ -2.46
CMC1-202ENST00000396610 UBE2G1P62253 170 aa-0.34□□□□□ -2.46
CMC1-202ENST00000396610 DR1Q01658 176 aa-0.34□□□□□ -2.46
CMC1-202ENST00000396610 C10orf82Q8WW14 230 aa-0.34□□□□□ -2.46
CMC1-202ENST00000396610 WFDC6Q9BQY6 131 aa-0.34□□□□□ -2.46
CMC1-202ENST00000396610 CYP4F30PQ9H0H9 118 aa-0.34□□□□□ -2.46
CMC1-202ENST00000396610 ZNF142P52746 1687 aaPredicted RBP-0.34□□□□□ -2.46
CMC1-202ENST00000396610 OVOS2A0A0J9YW53 1432 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms