RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 A0A087WWL8 130 aa13.11□□□□□ -0.31
PDLIM7-204ENST00000393546 MUC21A0A0G2JKD1 596 aa13.11□□□□□ -0.31
PDLIM7-204ENST00000393546 MUC21A0A140T8X8 626 aa13.11□□□□□ -0.31
PDLIM7-204ENST00000393546 CRYGDP07320 174 aa13.11□□□□□ -0.31
PDLIM7-204ENST00000393546 IGLC6P0CF74 106 aa13.11□□□□□ -0.31
PDLIM7-204ENST00000393546 SSTP61278 116 aa13.11□□□□□ -0.31
PDLIM7-204ENST00000393546 FAM74A3Q4VXF1 159 aa13.11□□□□□ -0.31
PDLIM7-204ENST00000393546 Q6ZSN1 163 aa13.11□□□□□ -0.31
PDLIM7-204ENST00000393546 RPP21Q9H633 154 aaKnown RBP13.11□□□□□ -0.31
PDLIM7-204ENST00000393546 A0A1W2PPQ1 181 aa13.1□□□□□ -0.31
PDLIM7-204ENST00000393546 F2Z2F3 143 aa13.1□□□□□ -0.31
PDLIM7-204ENST00000393546 GATCO43716 136 aaKnown RBP13.1□□□□□ -0.31
PDLIM7-204ENST00000393546 SRSF3P84103 164 aaKnown RBP13.1□□□□□ -0.31
PDLIM7-204ENST00000393546 FAM231DQ6ZW35 169 aa13.1□□□□□ -0.31
PDLIM7-204ENST00000393546 UPK3BQ9BT76 320 aa13.1□□□□□ -0.31
PDLIM7-204ENST00000393546 Q9H8V8 135 aa13.1□□□□□ -0.31
PDLIM7-204ENST00000393546 C9JQL5 133 aa13.09□□□□□ -0.31
PDLIM7-204ENST00000393546 ERVFC1-1P60608 527 aa13.09□□□□□ -0.31
PDLIM7-204ENST00000393546 CACNG7P62955 275 aa13.09□□□□□ -0.31
PDLIM7-204ENST00000393546 TMEM241Q24JQ0 296 aa13.09□□□□□ -0.31
PDLIM7-204ENST00000393546 LINC01551Q86U37 167 aa13.08□□□□□ -0.32
PDLIM7-204ENST00000393546 SMIM17P0DL12 118 aa13.07□□□□□ -0.32
PDLIM7-204ENST00000393546 LYZL1Q6UWQ5 148 aa13.07□□□□□ -0.32
PDLIM7-204ENST00000393546 Q6ZR54 194 aa13.07□□□□□ -0.32
PDLIM7-204ENST00000393546 C14orf178Q8N769 122 aaPredicted RBP13.07□□□□□ -0.32
PDLIM7-204ENST00000393546 NBDYA0A0U1RRE5 68 aa13.06□□□□□ -0.32
PDLIM7-204ENST00000393546 WDR73Q6P4I2 378 aa13.06□□□□□ -0.32
PDLIM7-204ENST00000393546 AP1S3Q96PC3 154 aa13.06□□□□□ -0.32
PDLIM7-204ENST00000393546 GAGE12JA6NER3 117 aa13.05□□□□□ -0.32
PDLIM7-204ENST00000393546 A8MWL6 223 aa13.05□□□□□ -0.32
PDLIM7-204ENST00000393546 TIRAPP58753 221 aa13.05□□□□□ -0.32
PDLIM7-204ENST00000393546 RAB4BP61018 213 aa13.05□□□□□ -0.32
PDLIM7-204ENST00000393546 GAGE1Q13065 139 aa13.05□□□□□ -0.32
PDLIM7-204ENST00000393546 GAGE4Q13068 117 aa13.05□□□□□ -0.32
PDLIM7-204ENST00000393546 GAGE5Q13069 117 aa13.05□□□□□ -0.32
PDLIM7-204ENST00000393546 GAGE13Q4V321 117 aa13.05□□□□□ -0.32
PDLIM7-204ENST00000393546 SOHLH1Q5JUK2 328 aa13.05□□□□□ -0.32
PDLIM7-204ENST00000393546 CLLU1Q5K131 121 aa13.05□□□□□ -0.32
PDLIM7-204ENST00000393546 ATP6V0E2Q8NHE4 81 aa13.05□□□□□ -0.32
PDLIM7-204ENST00000393546 NAT8Q9UHE5 227 aa13.05□□□□□ -0.32
PDLIM7-204ENST00000393546 SIVA1O15304 175 aa13.04□□□□□ -0.32
PDLIM7-204ENST00000393546 ZNF56Q15929 161 aa13.04□□□□□ -0.32
PDLIM7-204ENST00000393546 CT83Q5H943 113 aa13.04□□□□□ -0.32
PDLIM7-204ENST00000393546 OSTCQ9NRP0 149 aa13.04□□□□□ -0.32
PDLIM7-204ENST00000393546 DNAH10Q8IVF4 4471 aa13.03□□□□□ -0.32
PDLIM7-204ENST00000393546 F5H697 171 aa13.03□□□□□ -0.32
PDLIM7-204ENST00000393546 NTF3P20783 257 aa13.03□□□□□ -0.32
PDLIM7-204ENST00000393546 CTRLP40313 264 aa13.03□□□□□ -0.32
PDLIM7-204ENST00000393546 IFITM2Q01629 132 aa13.03□□□□□ -0.32
PDLIM7-204ENST00000393546 C15orf54Q8N8G6 183 aa13.03□□□□□ -0.32
PDLIM7-204ENST00000393546 MSRB1Q9NZV6 116 aa13.03□□□□□ -0.32
PDLIM7-204ENST00000393546 KIF25-AS1Q9Y6Z4 181 aa13.03□□□□□ -0.32
PDLIM7-204ENST00000393546 TRBV10-1A0A0K0K1A3 114 aa13.02□□□□□ -0.33
PDLIM7-204ENST00000393546 TRGC1P0CF51 173 aa13.02□□□□□ -0.33
PDLIM7-204ENST00000393546 RPL23P62829 140 aaKnown RBP13.02□□□□□ -0.33
PDLIM7-204ENST00000393546 ADIRFQ15847 76 aa13.02□□□□□ -0.33
PDLIM7-204ENST00000393546 TTC32Q5I0X7 151 aa13.02□□□□□ -0.33
PDLIM7-204ENST00000393546 GTSF1LQ9H1H1 148 aa13.02□□□□□ -0.33
PDLIM7-204ENST00000393546 Q9UF83 564 aa13.02□□□□□ -0.33
PDLIM7-204ENST00000393546 TWIST1Q15672 202 aa13.01□□□□□ -0.33
PDLIM7-204ENST00000393546 GTSF1Q8WW33 167 aa13.01□□□□□ -0.33
PDLIM7-204ENST00000393546 ISOC2Q96AB3 205 aa13.01□□□□□ -0.33
PDLIM7-204ENST00000393546 FOXA3P55318 350 aaPredicted RBP13□□□□□ -0.33
PDLIM7-204ENST00000393546 RPL36AP83881 106 aaKnown RBP13□□□□□ -0.33
PDLIM7-204ENST00000393546 C1orf134Q5TEV5 83 aa13□□□□□ -0.33
PDLIM7-204ENST00000393546 RPL36ALQ969Q0 106 aaKnown RBP13□□□□□ -0.33
PDLIM7-204ENST00000393546 CNFNQ9BYD5 112 aa13□□□□□ -0.33
PDLIM7-204ENST00000393546 TRAV8-6A0A0B4J262 113 aa12.99□□□□□ -0.33
PDLIM7-204ENST00000393546 LINC00694P0DN24 101 aa12.99□□□□□ -0.33
PDLIM7-204ENST00000393546 LINC00315P59091 139 aa12.99□□□□□ -0.33
PDLIM7-204ENST00000393546 OR10G8Q8NGN5 311 aa12.99□□□□□ -0.33
PDLIM7-204ENST00000393546 TSKUQ8WUA8 353 aa12.99□□□□□ -0.33
PDLIM7-204ENST00000393546 PGLYRP4Q96LB8 373 aa12.99□□□□□ -0.33
PDLIM7-204ENST00000393546 GFRA4Q9GZZ7 299 aa12.99□□□□□ -0.33
PDLIM7-204ENST00000393546 TRBV7-3A0A075B6L6 115 aa12.98□□□□□ -0.33
PDLIM7-204ENST00000393546 FAM231BA6NCW3 169 aa12.98□□□□□ -0.33
PDLIM7-204ENST00000393546 MGPP08493 103 aa12.98□□□□□ -0.33
PDLIM7-204ENST00000393546 EVI2AP22794 236 aa12.98□□□□□ -0.33
PDLIM7-204ENST00000393546 OR10J3Q5JRS4 329 aa12.98□□□□□ -0.33
PDLIM7-204ENST00000393546 LELP1Q5T871 98 aa12.98□□□□□ -0.33
PDLIM7-204ENST00000393546 LINC00336Q6ZUF6 198 aa12.98□□□□□ -0.33
PDLIM7-204ENST00000393546 WFDC10BQ8IUB3 73 aa12.98□□□□□ -0.33
PDLIM7-204ENST00000393546 BORCS7Q96B45 105 aa12.98□□□□□ -0.33
PDLIM7-204ENST00000393546 DPH3P1Q9H4G8 78 aa12.98□□□□□ -0.33
PDLIM7-204ENST00000393546 TRAV9-2A0A087WT02 112 aa12.97□□□□□ -0.33
PDLIM7-204ENST00000393546 SMIM15Q7Z3B0 74 aa12.97□□□□□ -0.33
PDLIM7-204ENST00000393546 C6orf223Q8N319 242 aa12.97□□□□□ -0.33
PDLIM7-204ENST00000393546 V9GYV3 84 aa12.97□□□□□ -0.33
PDLIM7-204ENST00000393546 DNAH2Q9P225 4427 aa12.97□□□□□ -0.33
PDLIM7-204ENST00000393546 A0A087WWC5 75 aa12.96□□□□□ -0.33
PDLIM7-204ENST00000393546 H7C1H1 209 aa12.96□□□□□ -0.33
PDLIM7-204ENST00000393546 RTL8CO15255 209 aa12.96□□□□□ -0.33
PDLIM7-204ENST00000393546 HIGD1CA8MV81 97 aa12.95□□□□□ -0.34
PDLIM7-204ENST00000393546 DNAH10OSP0CZ25 163 aa12.95□□□□□ -0.34
PDLIM7-204ENST00000393546 UBE2D3P61077 147 aa12.95□□□□□ -0.34
PDLIM7-204ENST00000393546 UBE2D2P62837 147 aa12.95□□□□□ -0.34
PDLIM7-204ENST00000393546 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.95□□□□□ -0.34
PDLIM7-204ENST00000393546 NEXN-AS1Q8NBZ9 246 aa12.95□□□□□ -0.34
PDLIM7-204ENST00000393546 KRTAP1-5Q9BYS1 174 aa12.95□□□□□ -0.34
PDLIM7-204ENST00000393546 FRAS1Q86XX4 4008 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms