RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 FAM74A4Q5TZK3 123 aa-0.18□□□□□ -2.44
SNORA40.2-201ENST00000390847 C20orf197Q8N268 126 aa-0.18□□□□□ -2.44
SNORA40.2-201ENST00000390847 LSM2Q9Y333 95 aaKnown RBP-0.18□□□□□ -2.44
SNORA40.2-201ENST00000390847 CELSR1Q9NYQ6 3014 aa-0.18□□□□□ -2.44
SNORA40.2-201ENST00000390847 ASXL3Q9C0F0 2248 aa-0.18□□□□□ -2.44
SNORA40.2-201ENST00000390847 TRBV7-1A0A0A6YYK4 115 aa-0.19□□□□□ -2.44
SNORA40.2-201ENST00000390847 DBIP07108 87 aaKnown RBP-0.19□□□□□ -2.44
SNORA40.2-201ENST00000390847 SLC48A1Q6P1K1 146 aa-0.19□□□□□ -2.44
SNORA40.2-201ENST00000390847 COX7B2Q8TF08 81 aa-0.19□□□□□ -2.44
SNORA40.2-201ENST00000390847 M0R2P5 195 aa-0.2□□□□□ -2.44
SNORA40.2-201ENST00000390847 IFITM1P13164 125 aa-0.2□□□□□ -2.44
SNORA40.2-201ENST00000390847 SPCS2Q15005 226 aa-0.2□□□□□ -2.44
SNORA40.2-201ENST00000390847 V9GYV3 84 aa-0.2□□□□□ -2.44
SNORA40.2-201ENST00000390847 CADP27708 2225 aa-0.2□□□□□ -2.44
SNORA40.2-201ENST00000390847 CASZ1Q86V15 1759 aa-0.21□□□□□ -2.44
SNORA40.2-201ENST00000390847 VIRMAQ69YN4 1812 aaKnown RBP-0.21□□□□□ -2.44
SNORA40.2-201ENST00000390847 XIRP1Q702N8 1843 aaKnown RBP-0.21□□□□□ -2.44
SNORA40.2-201ENST00000390847 ACYP2P14621 99 aa-0.21□□□□□ -2.44
SNORA40.2-201ENST00000390847 NCS1P62166 190 aa-0.21□□□□□ -2.44
SNORA40.2-201ENST00000390847 PTPRMP28827 1452 aa-0.22□□□□□ -2.44
SNORA40.2-201ENST00000390847 TRAV12-3A0A0B4J271 114 aa-0.22□□□□□ -2.44
SNORA40.2-201ENST00000390847 TAC4Q86UU9 113 aa-0.22□□□□□ -2.44
SNORA40.2-201ENST00000390847 Q96NJ1 140 aa-0.23□□□□□ -2.45
SNORA40.2-201ENST00000390847 ARAP1Q96P48 1450 aa-0.23□□□□□ -2.45
SNORA40.2-201ENST00000390847 AHCTF1Q8WYP5 2266 aa-0.24□□□□□ -2.45
SNORA40.2-201ENST00000390847 TRBV20-1A0A075B6N2 111 aa-0.24□□□□□ -2.45
SNORA40.2-201ENST00000390847 GCHFRP30047 84 aa-0.24□□□□□ -2.45
SNORA40.2-201ENST00000390847 Q6ZRX8 168 aa-0.24□□□□□ -2.45
SNORA40.2-201ENST00000390847 MMGT1Q8N4V1 131 aa-0.24□□□□□ -2.45
SNORA40.2-201ENST00000390847 AIF1LQ9BQI0 150 aa-0.24□□□□□ -2.45
SNORA40.2-201ENST00000390847 NDUFA12Q9UI09 145 aa-0.24□□□□□ -2.45
SNORA40.2-201ENST00000390847 ERCC6Q03468 1493 aa-0.24□□□□□ -2.45
SNORA40.2-201ENST00000390847 MACF1Q9UPN3 7388 aaKnown RBP-0.25□□□□□ -2.45
SNORA40.2-201ENST00000390847 MORN2Q502X0 79 aa-0.25□□□□□ -2.45
SNORA40.2-201ENST00000390847 LINC01545Q5VT33 79 aa-0.25□□□□□ -2.45
SNORA40.2-201ENST00000390847 PLXNA2O75051 1894 aa-0.26□□□□□ -2.45
SNORA40.2-201ENST00000390847 SSC5DA1L4H1 1573 aa-0.26□□□□□ -2.45
SNORA40.2-201ENST00000390847 KIF13AQ9H1H9 1805 aa-0.27□□□□□ -2.45
SNORA40.2-201ENST00000390847 ZNF142P52746 1687 aaPredicted RBP-0.27□□□□□ -2.45
SNORA40.2-201ENST00000390847 SYNJ1O43426 1573 aa-0.27□□□□□ -2.45
SNORA40.2-201ENST00000390847 TRGV1A0A0A0MS02 117 aa-0.27□□□□□ -2.45
SNORA40.2-201ENST00000390847 TMEM14DPA8MWL7 114 aa-0.27□□□□□ -2.45
SNORA40.2-201ENST00000390847 B2MP61769 119 aa-0.27□□□□□ -2.45
SNORA40.2-201ENST00000390847 SAR1AQ9NR31 198 aa-0.27□□□□□ -2.45
SNORA40.2-201ENST00000390847 SCP2D1Q9UJQ7 156 aa-0.27□□□□□ -2.45
SNORA40.2-201ENST00000390847 M0R129 80 aa-0.28□□□□□ -2.45
SNORA40.2-201ENST00000390847 SPANXN1Q5VSR9 72 aa-0.28□□□□□ -2.45
SNORA40.2-201ENST00000390847 RPL7L1Q6DKI1 246 aaKnown RBP-0.28□□□□□ -2.45
SNORA40.2-201ENST00000390847 VSTM2AQ8TAG5 236 aa-0.28□□□□□ -2.45
SNORA40.2-201ENST00000390847 CHD9Q3L8U1 2897 aa-0.29□□□□□ -2.46
SNORA40.2-201ENST00000390847 INSL4Q14641 139 aa-0.29□□□□□ -2.46
SNORA40.2-201ENST00000390847 MIC13Q5XKP0 118 aa-0.29□□□□□ -2.46
SNORA40.2-201ENST00000390847 ABCA2Q9BZC7 2435 aa-0.29□□□□□ -2.46
SNORA40.2-201ENST00000390847 WNK2Q9Y3S1 2297 aa-0.3□□□□□ -2.46
SNORA40.2-201ENST00000390847 A6NIN4 97 aa-0.3□□□□□ -2.46
SNORA40.2-201ENST00000390847 C10orf142B7Z368 130 aa-0.3□□□□□ -2.46
SNORA40.2-201ENST00000390847 CFDP00746 253 aaPredicted RBP-0.3□□□□□ -2.46
SNORA40.2-201ENST00000390847 PIRTP0C851 137 aa-0.3□□□□□ -2.46
SNORA40.2-201ENST00000390847 SCGB1A1P11684 91 aa-0.3□□□□□ -2.46
SNORA40.2-201ENST00000390847 HIST1H1AQ02539 215 aaPredicted RBP-0.3□□□□□ -2.46
SNORA40.2-201ENST00000390847 UBE2DNLQ8IWF7 75 aa-0.3□□□□□ -2.46
SNORA40.2-201ENST00000390847 BATF3Q9NR55 127 aa-0.3□□□□□ -2.46
SNORA40.2-201ENST00000390847 RPRMQ9NS64 109 aa-0.3□□□□□ -2.46
SNORA40.2-201ENST00000390847 FLNCQ14315 2725 aa-0.3□□□□□ -2.46
SNORA40.2-201ENST00000390847 NSD1Q96L73 2696 aaPredicted RBP-0.31□□□□□ -2.46
SNORA40.2-201ENST00000390847 FAM236AA0A1B0GUQ0 79 aa-0.31□□□□□ -2.46
SNORA40.2-201ENST00000390847 FAM236BA0A1B0GV22 79 aa-0.31□□□□□ -2.46
SNORA40.2-201ENST00000390847 EDDM3BP56851 147 aa-0.31□□□□□ -2.46
SNORA40.2-201ENST00000390847 IGLC6P0CF74 106 aa-0.32□□□□□ -2.46
SNORA40.2-201ENST00000390847 SSBP3-AS1Q7Z2R9 100 aa-0.32□□□□□ -2.46
SNORA40.2-201ENST00000390847 CTAGE3PQ8IX95 158 aa-0.32□□□□□ -2.46
SNORA40.2-201ENST00000390847 ZNF815PA8K554 130 aa-0.33□□□□□ -2.46
SNORA40.2-201ENST00000390847 J3QR89 54 aa-0.33□□□□□ -2.46
SNORA40.2-201ENST00000390847 C9orf116Q5BN46 136 aaPredicted RBP-0.33□□□□□ -2.46
SNORA40.2-201ENST00000390847 PYDC1Q8WXC3 89 aa-0.33□□□□□ -2.46
SNORA40.2-201ENST00000390847 SMIM3Q9BZL3 60 aa-0.33□□□□□ -2.46
SNORA40.2-201ENST00000390847 OVOS2A0A0J9YW53 1432 aa-0.33□□□□□ -2.46
SNORA40.2-201ENST00000390847 OVOS2Q6IE36 1432 aa-0.33□□□□□ -2.46
SNORA40.2-201ENST00000390847 DOCK11Q5JSL3 2073 aa-0.33□□□□□ -2.46
SNORA40.2-201ENST00000390847 KIAA0100Q14667 2235 aaKnown RBP-0.34□□□□□ -2.46
SNORA40.2-201ENST00000390847 CACNA1AO00555 2505 aa-0.34□□□□□ -2.46
SNORA40.2-201ENST00000390847 C10orf82Q8WW14 230 aa-0.34□□□□□ -2.46
SNORA40.2-201ENST00000390847 PSMG3Q9BT73 122 aaPredicted RBP-0.34□□□□□ -2.46
SNORA40.2-201ENST00000390847 DISP2A7MBM2 1401 aa-0.35□□□□□ -2.47
SNORA40.2-201ENST00000390847 CKS1BP61024 79 aa-0.35□□□□□ -2.47
SNORA40.2-201ENST00000390847 AKAP14Q86UN6 197 aa-0.35□□□□□ -2.47
SNORA40.2-201ENST00000390847 GSKIPQ9P0R6 139 aa-0.35□□□□□ -2.47
SNORA40.2-201ENST00000390847 ANKRD30AQ9BXX3 1397 aa-0.35□□□□□ -2.47
SNORA40.2-201ENST00000390847 IBTKQ9P2D0 1353 aaPredicted RBP-0.35□□□□□ -2.47
SNORA40.2-201ENST00000390847 TRAV1-2A0A0B4J238 106 aa-0.36□□□□□ -2.47
SNORA40.2-201ENST00000390847 M0R2Z0 102 aa-0.36□□□□□ -2.47
SNORA40.2-201ENST00000390847 IFNA17P01571 189 aa-0.36□□□□□ -2.47
SNORA40.2-201ENST00000390847 LINC00694P0DN24 101 aa-0.36□□□□□ -2.47
SNORA40.2-201ENST00000390847 UBE2G1P62253 170 aa-0.36□□□□□ -2.47
SNORA40.2-201ENST00000390847 DR1Q01658 176 aa-0.36□□□□□ -2.47
SNORA40.2-201ENST00000390847 LZICQ8WZA0 190 aa-0.36□□□□□ -2.47
SNORA40.2-201ENST00000390847 PLXNA1Q9UIW2 1896 aa-0.36□□□□□ -2.47
SNORA40.2-201ENST00000390847 PHIPQ8WWQ0 1821 aa-0.36□□□□□ -2.47
SNORA40.2-201ENST00000390847 NRXN2Q9P2S2 1712 aa-0.37□□□□□ -2.47
SNORA40.2-201ENST00000390847 FAM92AA1XBS5 289 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms