RNA–Protein interactions for RNA: ENST00000385247.1

MIR548B-201, Transcript of microRNA 548b, humanhuman

BASIC

Gene MIR548B, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548B-201ENST00000385247 BAGE3Q86Y29 109 aa0.36□□□□□ -2.35
MIR548B-201ENST00000385247 FAM213BQ8TBF2 198 aa0.36□□□□□ -2.35
MIR548B-201ENST00000385247 FAM103A1Q9BTL3 118 aaKnown RBP0.36□□□□□ -2.35
MIR548B-201ENST00000385247 PROK2Q9HC23 129 aa0.36□□□□□ -2.35
MIR548B-201ENST00000385247 R4GMQ9 66 aa0.36□□□□□ -2.35
MIR548B-201ENST00000385247 TENM3Q9P273 2699 aa0.35□□□□□ -2.35
MIR548B-201ENST00000385247 CDK13Q14004 1512 aaKnown RBP0.35□□□□□ -2.35
MIR548B-201ENST00000385247 A0A0D9SFI3 127 aa0.35□□□□□ -2.35
MIR548B-201ENST00000385247 SPINK1P00995 79 aa0.35□□□□□ -2.35
MIR548B-201ENST00000385247 APOC2P02655 101 aa0.35□□□□□ -2.35
MIR548B-201ENST00000385247 NPC2P61916 151 aa0.35□□□□□ -2.35
MIR548B-201ENST00000385247 SMIM4Q8WVI0 70 aa0.35□□□□□ -2.35
MIR548B-201ENST00000385247 DPH3Q96FX2 82 aa0.35□□□□□ -2.35
MIR548B-201ENST00000385247 SNRNP25Q9BV90 132 aaKnown RBP0.35□□□□□ -2.35
MIR548B-201ENST00000385247 LINC00470Q9BZP3 86 aa0.35□□□□□ -2.35
MIR548B-201ENST00000385247 AGPAT4-IT1Q9H0P7 198 aa0.35□□□□□ -2.35
MIR548B-201ENST00000385247 TNRC6AQ8NDV7 1962 aaKnown RBP0.35□□□□□ -2.35
MIR548B-201ENST00000385247 TET1Q8NFU7 2136 aa0.35□□□□□ -2.35
MIR548B-201ENST00000385247 NUP210Q8TEM1 1887 aaPredicted RBP0.35□□□□□ -2.35
MIR548B-201ENST00000385247 MUC4Q99102 2169 aa0.35□□□□□ -2.35
MIR548B-201ENST00000385247 ZNF518AQ6AHZ1 1483 aa0.35□□□□□ -2.35
MIR548B-201ENST00000385247 N4BP2Q86UW6 1770 aaPredicted RBP0.34□□□□□ -2.35
MIR548B-201ENST00000385247 SIP14410 1827 aa0.34□□□□□ -2.35
MIR548B-201ENST00000385247 ZNF469Q96JG9 3925 aaPredicted RBP0.34□□□□□ -2.35
MIR548B-201ENST00000385247 K7EP13 123 aa0.34□□□□□ -2.36
MIR548B-201ENST00000385247 SIX6O95475 246 aa0.34□□□□□ -2.36
MIR548B-201ENST00000385247 AKAIN1P0CW23 69 aa0.34□□□□□ -2.36
MIR548B-201ENST00000385247 HIST1H1DP16402 221 aaKnown RBP0.34□□□□□ -2.36
MIR548B-201ENST00000385247 FGF7P21781 194 aa0.34□□□□□ -2.36
MIR548B-201ENST00000385247 INSL4Q14641 139 aa0.34□□□□□ -2.36
MIR548B-201ENST00000385247 Q56UQ5 140 aa0.34□□□□□ -2.36
MIR548B-201ENST00000385247 MEIG1Q5JSS6 88 aa0.34□□□□□ -2.36
MIR548B-201ENST00000385247 S100A7L2Q5SY68 101 aa0.34□□□□□ -2.36
MIR548B-201ENST00000385247 C10orf128Q5T292 105 aa0.34□□□□□ -2.36
MIR548B-201ENST00000385247 RPL13AP3Q6NVV1 102 aa0.34□□□□□ -2.36
MIR548B-201ENST00000385247 Q6ZRX8 168 aa0.34□□□□□ -2.36
MIR548B-201ENST00000385247 UBE2DNLQ8IWF7 75 aa0.34□□□□□ -2.36
MIR548B-201ENST00000385247 C8orf59Q8N0T1 100 aaPredicted RBP0.34□□□□□ -2.36
MIR548B-201ENST00000385247 SDF2Q99470 211 aa0.34□□□□□ -2.36
MIR548B-201ENST00000385247 NPVFQ9HCQ7 196 aa0.34□□□□□ -2.36
MIR548B-201ENST00000385247 SERP1Q9Y6X1 66 aa0.34□□□□□ -2.36
MIR548B-201ENST00000385247 MYH7BA7E2Y1 1941 aa0.34□□□□□ -2.36
MIR548B-201ENST00000385247 LAMA4Q16363 1823 aa0.34□□□□□ -2.36
MIR548B-201ENST00000385247 IBTKQ9P2D0 1353 aaPredicted RBP0.33□□□□□ -2.36
MIR548B-201ENST00000385247 CHD3Q12873 2000 aaKnown RBP0.33□□□□□ -2.36
MIR548B-201ENST00000385247 SYNJ1O43426 1573 aa0.33□□□□□ -2.36
MIR548B-201ENST00000385247 MYH2Q9UKX2 1941 aa0.33□□□□□ -2.36
MIR548B-201ENST00000385247 GVQW2A0A096LPI5 108 aaPredicted RBP0.33□□□□□ -2.36
MIR548B-201ENST00000385247 TRGV1A0A0A0MS02 117 aa0.33□□□□□ -2.36
MIR548B-201ENST00000385247 TRAV13-2A0A0B4J235 113 aa0.33□□□□□ -2.36
MIR548B-201ENST00000385247 LOC285095A0A1B0GVY8 99 aa0.33□□□□□ -2.36
MIR548B-201ENST00000385247 NDUFA2O43678 99 aa0.33□□□□□ -2.36
MIR548B-201ENST00000385247 GNG7O60262 68 aa0.33□□□□□ -2.36
MIR548B-201ENST00000385247 PPP1R17O96001 155 aa0.33□□□□□ -2.36
MIR548B-201ENST00000385247 SPINK8P0C7L1 97 aa0.33□□□□□ -2.36
MIR548B-201ENST00000385247 UBE2D1P51668 147 aa0.33□□□□□ -2.36
MIR548B-201ENST00000385247 BTG2P78543 158 aa0.33□□□□□ -2.36
MIR548B-201ENST00000385247 MRPS10P82664 201 aaKnown RBP0.33□□□□□ -2.36
MIR548B-201ENST00000385247 Q5VV11 94 aa0.33□□□□□ -2.36
MIR548B-201ENST00000385247 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.33□□□□□ -2.36
MIR548B-201ENST00000385247 MYOZ3Q8TDC0 251 aa0.33□□□□□ -2.36
MIR548B-201ENST00000385247 LINC00312Q9Y6C7 94 aa0.33□□□□□ -2.36
MIR548B-201ENST00000385247 MCM3APO60318 1980 aa0.33□□□□□ -2.36
MIR548B-201ENST00000385247 EML5Q05BV3 1969 aa0.33□□□□□ -2.36
MIR548B-201ENST00000385247 IFT140Q96RY7 1462 aa0.33□□□□□ -2.36
MIR548B-201ENST00000385247 USP54Q70EL1 1684 aa0.33□□□□□ -2.36
MIR548B-201ENST00000385247 KCPQ6ZWJ8 1503 aa0.33□□□□□ -2.36
MIR548B-201ENST00000385247 UNC13AQ9UPW8 1703 aa0.33□□□□□ -2.36
MIR548B-201ENST00000385247 PTPRFP10586 1907 aa0.32□□□□□ -2.36
MIR548B-201ENST00000385247 KTN1Q86UP2 1357 aaKnown RBP0.32□□□□□ -2.36
MIR548B-201ENST00000385247 ALPK3Q96L96 1907 aa0.32□□□□□ -2.36
MIR548B-201ENST00000385247 KIDINS220Q9ULH0 1771 aa0.32□□□□□ -2.36
MIR548B-201ENST00000385247 FBN2P35556 2912 aa0.32□□□□□ -2.36
MIR548B-201ENST00000385247 CTXND1A0A1B0GTU2 59 aa0.32□□□□□ -2.36
MIR548B-201ENST00000385247 HCG22E2RYF7 251 aa0.32□□□□□ -2.36
MIR548B-201ENST00000385247 SSSCA1O60232 199 aa0.32□□□□□ -2.36
MIR548B-201ENST00000385247 APOC3P02656 99 aa0.32□□□□□ -2.36
MIR548B-201ENST00000385247 NMBP08949 121 aa0.32□□□□□ -2.36
MIR548B-201ENST00000385247 RBM3P98179 157 aaKnown RBP0.32□□□□□ -2.36
MIR548B-201ENST00000385247 COX17Q14061 63 aa0.32□□□□□ -2.36
MIR548B-201ENST00000385247 Q6AWC8 147 aa0.32□□□□□ -2.36
MIR548B-201ENST00000385247 KRTAP19-3Q7Z4W3 81 aa0.32□□□□□ -2.36
MIR548B-201ENST00000385247 TTC9CQ8N5M4 171 aa0.32□□□□□ -2.36
MIR548B-201ENST00000385247 C10orf82Q8WW14 230 aa0.32□□□□□ -2.36
MIR548B-201ENST00000385247 WFDC6Q9BQY6 131 aa0.32□□□□□ -2.36
MIR548B-201ENST00000385247 NUP210LQ5VU65 1888 aa0.32□□□□□ -2.36
MIR548B-201ENST00000385247 KDM6BO15054 1643 aa0.31□□□□□ -2.36
MIR548B-201ENST00000385247 LRP5O75197 1615 aa0.31□□□□□ -2.36
MIR548B-201ENST00000385247 PHRF1Q9P1Y6 1649 aaKnown RBP0.31□□□□□ -2.36
MIR548B-201ENST00000385247 GRIN2AQ12879 1464 aa0.31□□□□□ -2.36
MIR548B-201ENST00000385247 TRAV1-2A0A0B4J238 106 aa0.31□□□□□ -2.36
MIR548B-201ENST00000385247 FAM24AA6NFZ4 105 aa0.31□□□□□ -2.36
MIR548B-201ENST00000385247 SNAPC5O75971 98 aa0.31□□□□□ -2.36
MIR548B-201ENST00000385247 IFITM1P13164 125 aa0.31□□□□□ -2.36
MIR548B-201ENST00000385247 TPPP2P59282 170 aa0.31□□□□□ -2.36
MIR548B-201ENST00000385247 SPAG11BQ08648 103 aa0.31□□□□□ -2.36
MIR548B-201ENST00000385247 Q5BKY6 102 aa0.31□□□□□ -2.36
MIR548B-201ENST00000385247 CFAP126Q5VTH2 177 aa0.31□□□□□ -2.36
MIR548B-201ENST00000385247 SPAG11AQ6PDA7 123 aa0.31□□□□□ -2.36
MIR548B-201ENST00000385247 SMR3AQ99954 134 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms