RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 FOXI1Q12951 378 aa10.76□□□□□ -0.69
CLCN4-201ENST00000380829 SHISA2Q6UWI4 295 aa10.76□□□□□ -0.69
CLCN4-201ENST00000380829 ZNF493Q6ZR52 646 aa10.76□□□□□ -0.69
CLCN4-201ENST00000380829 NFE4Q86UQ8 179 aa10.76□□□□□ -0.69
CLCN4-201ENST00000380829 C11orf21Q9P2W6 132 aa10.76□□□□□ -0.69
CLCN4-201ENST00000380829 U3KQK5 164 aa10.76□□□□□ -0.69
CLCN4-201ENST00000380829 FLNAP21333 2647 aaKnown RBP10.75□□□□□ -0.69
CLCN4-201ENST00000380829 A0A1B0GW15 77 aa10.75□□□□□ -0.69
CLCN4-201ENST00000380829 TMEM89A2RUT3 159 aa10.75□□□□□ -0.69
CLCN4-201ENST00000380829 IGLC6P0CF74 106 aa10.75□□□□□ -0.69
CLCN4-201ENST00000380829 PGPEP1Q9NXJ5 209 aa10.75□□□□□ -0.69
CLCN4-201ENST00000380829 F6UB75 175 aa10.75□□□□□ -0.69
CLCN4-201ENST00000380829 CKS2P33552 79 aa10.75□□□□□ -0.69
CLCN4-201ENST00000380829 LINC01559Q495D7 138 aa10.75□□□□□ -0.69
CLCN4-201ENST00000380829 PRR9Q5T870 116 aa10.75□□□□□ -0.69
CLCN4-201ENST00000380829 SFTA2Q6UW10 78 aa10.75□□□□□ -0.69
CLCN4-201ENST00000380829 FOXC2Q99958 501 aa10.75□□□□□ -0.69
CLCN4-201ENST00000380829 CYSLTR1Q9Y271 337 aa10.75□□□□□ -0.69
CLCN4-201ENST00000380829 PDZD2O15018 2839 aa10.74□□□□□ -0.69
CLCN4-201ENST00000380829 NOTCH2Q04721 2471 aa10.74□□□□□ -0.69
CLCN4-201ENST00000380829 ACANP16112 2415 aa10.74□□□□□ -0.69
CLCN4-201ENST00000380829 IGKV3D-20A0A0C4DH25 116 aa10.74□□□□□ -0.69
CLCN4-201ENST00000380829 IGKCP01834 107 aa10.74□□□□□ -0.69
CLCN4-201ENST00000380829 PRSS1P07477 247 aa10.74□□□□□ -0.69
CLCN4-201ENST00000380829 TWIST1Q15672 202 aa10.74□□□□□ -0.69
CLCN4-201ENST00000380829 Q6ZUT4 128 aa10.74□□□□□ -0.69
CLCN4-201ENST00000380829 C1QTNF4Q9BXJ3 329 aa10.74□□□□□ -0.69
CLCN4-201ENST00000380829 K7EMT4 169 aa10.74□□□□□ -0.69
CLCN4-201ENST00000380829 RRN3P1Q2M238 152 aa10.74□□□□□ -0.69
CLCN4-201ENST00000380829 MSRB1Q9NZV6 116 aa10.74□□□□□ -0.69
CLCN4-201ENST00000380829 ERG28Q9UKR5 140 aa10.74□□□□□ -0.69
CLCN4-201ENST00000380829 IGHV4OR15-8A0A075B7B6 117 aa10.73□□□□□ -0.69
CLCN4-201ENST00000380829 A0A087WW49 117 aa10.73□□□□□ -0.69
CLCN4-201ENST00000380829 ELANEP08246 267 aa10.73□□□□□ -0.69
CLCN4-201ENST00000380829 LEPP41159 167 aa10.73□□□□□ -0.69
CLCN4-201ENST00000380829 SMCPP49901 116 aaPredicted RBP10.73□□□□□ -0.69
CLCN4-201ENST00000380829 SYNJ2BPP57105 145 aa10.73□□□□□ -0.69
CLCN4-201ENST00000380829 SRSF2Q01130 221 aaKnown RBP10.73□□□□□ -0.69
CLCN4-201ENST00000380829 OR10J6PQ8NGY7 276 aa10.73□□□□□ -0.69
CLCN4-201ENST00000380829 ZMAT4Q9H898 229 aa10.73□□□□□ -0.69
CLCN4-201ENST00000380829 TMEM160Q9NX00 188 aa10.73□□□□□ -0.69
CLCN4-201ENST00000380829 UFC1Q9Y3C8 167 aa10.73□□□□□ -0.69
CLCN4-201ENST00000380829 CUBNO60494 3623 aa10.73□□□□□ -0.69
CLCN4-201ENST00000380829 LGALS1P09382 135 aaKnown RBP10.73□□□□□ -0.69
CLCN4-201ENST00000380829 PTH2Q96A98 100 aa10.73□□□□□ -0.69
CLCN4-201ENST00000380829 HIST1H4GQ99525 98 aa10.73□□□□□ -0.69
CLCN4-201ENST00000380829 AKAP9Q99996 3911 aa10.72□□□□□ -0.69
CLCN4-201ENST00000380829 EVI2AP22794 236 aa10.72□□□□□ -0.69
CLCN4-201ENST00000380829 MYOZ3Q8TDC0 251 aa10.72□□□□□ -0.69
CLCN4-201ENST00000380829 OVOL1O14753 267 aa10.72□□□□□ -0.69
CLCN4-201ENST00000380829 C18orf65Q6ZTR6 163 aa10.72□□□□□ -0.69
CLCN4-201ENST00000380829 MYO9AB2RTY4 2548 aa10.71□□□□□ -0.69
CLCN4-201ENST00000380829 DEFB136Q30KP8 78 aa10.71□□□□□ -0.69
CLCN4-201ENST00000380829 UBE2E2Q96LR5 201 aa10.71□□□□□ -0.69
CLCN4-201ENST00000380829 LINC00477Q96M19 166 aa10.71□□□□□ -0.69
CLCN4-201ENST00000380829 ANAPC13Q9BS18 74 aa10.71□□□□□ -0.69
CLCN4-201ENST00000380829 HOXD3P31249 432 aaPredicted RBP10.7□□□□□ -0.7
CLCN4-201ENST00000380829 HIST2H2BDQ6DRA6 164 aa10.7□□□□□ -0.7
CLCN4-201ENST00000380829 DCANP1Q8TF63 244 aa10.7□□□□□ -0.7
CLCN4-201ENST00000380829 OR11H12B2RN74 326 aa10.7□□□□□ -0.7
CLCN4-201ENST00000380829 B5MCH6 92 aa10.7□□□□□ -0.7
CLCN4-201ENST00000380829 CFAP126Q5VTH2 177 aa10.7□□□□□ -0.7
CLCN4-201ENST00000380829 ZFAND2AQ8N6M9 145 aa10.7□□□□□ -0.7
CLCN4-201ENST00000380829 OR11H1Q8NG94 326 aa10.7□□□□□ -0.7
CLCN4-201ENST00000380829 OR11H2Q8NH07 326 aa10.7□□□□□ -0.7
CLCN4-201ENST00000380829 DPM2O94777 84 aa10.69□□□□□ -0.7
CLCN4-201ENST00000380829 MORN3Q6PF18 240 aaPredicted RBP10.69□□□□□ -0.7
CLCN4-201ENST00000380829 Q8N2B8 174 aa10.69□□□□□ -0.7
CLCN4-201ENST00000380829 MRPL35Q9NZE8 188 aaKnown RBP10.69□□□□□ -0.7
CLCN4-201ENST00000380829 PRSS29PA6NIE9 313 aa10.69□□□□□ -0.7
CLCN4-201ENST00000380829 RNF152Q8N8N0 203 aa10.69□□□□□ -0.7
CLCN4-201ENST00000380829 CNFNQ9BYD5 112 aa10.69□□□□□ -0.7
CLCN4-201ENST00000380829 LENEPQ9Y5L5 61 aa10.69□□□□□ -0.7
CLCN4-201ENST00000380829 GATA1P15976 413 aaPredicted RBP10.68□□□□□ -0.7
CLCN4-201ENST00000380829 TMEM158Q8WZ71 300 aa10.68□□□□□ -0.7
CLCN4-201ENST00000380829 KHDC1LQ5JSQ8 128 aa10.68□□□□□ -0.7
CLCN4-201ENST00000380829 MAP1LC3AQ9H492 121 aa10.68□□□□□ -0.7
CLCN4-201ENST00000380829 ZNF688P0C7X2 276 aa10.67□□□□□ -0.7
CLCN4-201ENST00000380829 RNASE4P34096 147 aaKnown RBP10.67□□□□□ -0.7
CLCN4-201ENST00000380829 ID1P41134 155 aa10.67□□□□□ -0.7
CLCN4-201ENST00000380829 SLURP1P55000 103 aa10.67□□□□□ -0.7
CLCN4-201ENST00000380829 TRBV7-3A0A075B6L6 115 aa10.67□□□□□ -0.7
CLCN4-201ENST00000380829 DNAJC9-AS1A6NH13 148 aa10.67□□□□□ -0.7
CLCN4-201ENST00000380829 KRTAP1-1Q07627 177 aa10.67□□□□□ -0.7
CLCN4-201ENST00000380829 ANXA2RQ3ZCQ2 193 aa10.67□□□□□ -0.7
CLCN4-201ENST00000380829 DUX3Q96PT4 197 aa10.67□□□□□ -0.7
CLCN4-201ENST00000380829 H3BVH4 76 aa10.66□□□□□ -0.7
CLCN4-201ENST00000380829 PSMB2P49721 201 aa10.66□□□□□ -0.7
CLCN4-201ENST00000380829 FAM19A4Q96LR4 140 aa10.66□□□□□ -0.7
CLCN4-201ENST00000380829 CARD19Q96LW7 228 aa10.66□□□□□ -0.7
CLCN4-201ENST00000380829 KIR2DL4Q99706 377 aa10.66□□□□□ -0.7
CLCN4-201ENST00000380829 LGALS9O00182 355 aa10.66□□□□□ -0.7
CLCN4-201ENST00000380829 SPRY2O43597 315 aa10.66□□□□□ -0.7
CLCN4-201ENST00000380829 PSMG4Q5JS54 123 aa10.66□□□□□ -0.7
CLCN4-201ENST00000380829 RNF185Q96GF1 192 aa10.66□□□□□ -0.7
CLCN4-201ENST00000380829 NF1P21359 2839 aa10.66□□□□□ -0.7
CLCN4-201ENST00000380829 TRAV21A0A0B4J279 112 aa10.65□□□□□ -0.7
CLCN4-201ENST00000380829 LOC107984156A0A0G2JMH3 177 aa10.65□□□□□ -0.7
CLCN4-201ENST00000380829 ZFP2Q6ZN57 461 aa10.65□□□□□ -0.7
CLCN4-201ENST00000380829 Q6ZSV7 163 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms