RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 TRAV13-1A0A0B4J241 112 aa8.42□□□□□ -1.06
PCDHGA1-201ENST00000378105 TREML4Q6UXN2 200 aa8.42□□□□□ -1.06
PCDHGA1-201ENST00000378105 Q8N1Y9 231 aa8.42□□□□□ -1.06
PCDHGA1-201ENST00000378105 IFI27P40305 119 aaPredicted RBP8.41□□□□□ -1.06
PCDHGA1-201ENST00000378105 KLF5Q13887 457 aaPredicted RBP8.41□□□□□ -1.06
PCDHGA1-201ENST00000378105 MAPKAPK5-AS1Q8N8E1 139 aa8.41□□□□□ -1.06
PCDHGA1-201ENST00000378105 SRRM4A7MD48 611 aaKnown RBP8.41□□□□□ -1.06
PCDHGA1-201ENST00000378105 SLC25A20O43772 301 aa8.41□□□□□ -1.06
PCDHGA1-201ENST00000378105 MORN3Q6PF18 240 aaPredicted RBP8.41□□□□□ -1.06
PCDHGA1-201ENST00000378105 ANAPC10Q9UM13 185 aa8.41□□□□□ -1.06
PCDHGA1-201ENST00000378105 A0A1B0GX51 115 aa8.4□□□□□ -1.06
PCDHGA1-201ENST00000378105 ZNF22P17026 224 aaPredicted RBP8.4□□□□□ -1.06
PCDHGA1-201ENST00000378105 CHCHD1Q96BP2 118 aaKnown RBP8.4□□□□□ -1.06
PCDHGA1-201ENST00000378105 WDR83OSQ9Y284 106 aa8.4□□□□□ -1.06
PCDHGA1-201ENST00000378105 SMIM27A0A1W2PRY6 76 aa8.4□□□□□ -1.06
PCDHGA1-201ENST00000378105 H7C1H1 209 aa8.4□□□□□ -1.06
PCDHGA1-201ENST00000378105 ATP6V0E1O15342 81 aa8.4□□□□□ -1.06
PCDHGA1-201ENST00000378105 NDPQ00604 133 aa8.4□□□□□ -1.06
PCDHGA1-201ENST00000378105 OVOL1O14753 267 aa8.4□□□□□ -1.07
PCDHGA1-201ENST00000378105 UQCRQO14949 82 aa8.4□□□□□ -1.07
PCDHGA1-201ENST00000378105 IGHV4-38-2P0DP08 117 aa8.4□□□□□ -1.07
PCDHGA1-201ENST00000378105 ZFP36P26651 326 aaKnown RBP8.4□□□□□ -1.07
PCDHGA1-201ENST00000378105 ZNRF2Q8NHG8 242 aa8.4□□□□□ -1.07
PCDHGA1-201ENST00000378105 C15orf62A8K5M9 175 aa8.39□□□□□ -1.07
PCDHGA1-201ENST00000378105 DAZAP2Q15038 168 aaPredicted RBP8.39□□□□□ -1.07
PCDHGA1-201ENST00000378105 ZNF503Q96F45 646 aa8.39□□□□□ -1.07
PCDHGA1-201ENST00000378105 S100A7L2Q5SY68 101 aa8.39□□□□□ -1.07
PCDHGA1-201ENST00000378105 Q6ZSR3 168 aa8.39□□□□□ -1.07
PCDHGA1-201ENST00000378105 SPANXA1Q9NS26 97 aa8.39□□□□□ -1.07
PCDHGA1-201ENST00000378105 OSTCQ9NRP0 149 aa8.39□□□□□ -1.07
PCDHGA1-201ENST00000378105 AMN1Q8IY45 258 aa8.39□□□□□ -1.07
PCDHGA1-201ENST00000378105 ZNF561-AS1K7EIQ3 104 aa8.38□□□□□ -1.07
PCDHGA1-201ENST00000378105 IGHV4-59P01825 116 aa8.38□□□□□ -1.07
PCDHGA1-201ENST00000378105 HBBP68871 147 aa8.38□□□□□ -1.07
PCDHGA1-201ENST00000378105 MYOZ3Q8TDC0 251 aa8.38□□□□□ -1.07
PCDHGA1-201ENST00000378105 ANKRD17O75179 2603 aaKnown RBP8.38□□□□□ -1.07
PCDHGA1-201ENST00000378105 PAX8Q06710 450 aa8.38□□□□□ -1.07
PCDHGA1-201ENST00000378105 TMEM14EPQ6UXP3 125 aa8.38□□□□□ -1.07
PCDHGA1-201ENST00000378105 RNASE2P10153 161 aaKnown RBP8.38□□□□□ -1.07
PCDHGA1-201ENST00000378105 DEFB112Q30KQ8 113 aa8.38□□□□□ -1.07
PCDHGA1-201ENST00000378105 ZNF833PQ6ZTB9 187 aa8.38□□□□□ -1.07
PCDHGA1-201ENST00000378105 BBC3Q96PG8 261 aaPredicted RBP8.38□□□□□ -1.07
PCDHGA1-201ENST00000378105 C2orf83Q53S99 150 aa8.37□□□□□ -1.07
PCDHGA1-201ENST00000378105 SPANXN1Q5VSR9 72 aa8.37□□□□□ -1.07
PCDHGA1-201ENST00000378105 LINC00311Q8N616 119 aa8.37□□□□□ -1.07
PCDHGA1-201ENST00000378105 MGPP08493 103 aa8.37□□□□□ -1.07
PCDHGA1-201ENST00000378105 IGFL4Q6B9Z1 124 aa8.37□□□□□ -1.07
PCDHGA1-201ENST00000378105 MRPS12O15235 138 aaKnown RBP8.36□□□□□ -1.07
PCDHGA1-201ENST00000378105 SNRPD3P62318 126 aaKnown RBP8.36□□□□□ -1.07
PCDHGA1-201ENST00000378105 WT1-ASQ06250 92 aa8.36□□□□□ -1.07
PCDHGA1-201ENST00000378105 C8orf31Q8N9H6 132 aa8.36□□□□□ -1.07
PCDHGA1-201ENST00000378105 KLHL30-AS1Q8NEE0 82 aa8.36□□□□□ -1.07
PCDHGA1-201ENST00000378105 RNF5Q99942 180 aa8.36□□□□□ -1.07
PCDHGA1-201ENST00000378105 PMS2P5A8MQ11 134 aa8.36□□□□□ -1.07
PCDHGA1-201ENST00000378105 IFI27L1Q96BM0 104 aa8.36□□□□□ -1.07
PCDHGA1-201ENST00000378105 LINC00526Q96FQ7 95 aa8.36□□□□□ -1.07
PCDHGA1-201ENST00000378105 MGST2Q99735 147 aa8.36□□□□□ -1.07
PCDHGA1-201ENST00000378105 IGKCP01834 107 aa8.35□□□□□ -1.07
PCDHGA1-201ENST00000378105 HOXB4P17483 251 aaPredicted RBP8.35□□□□□ -1.07
PCDHGA1-201ENST00000378105 NACAE9PAV3 2078 aa8.35□□□□□ -1.07
PCDHGA1-201ENST00000378105 MYMXA0A1B0GTQ4 84 aa8.35□□□□□ -1.07
PCDHGA1-201ENST00000378105 NDUFA3O95167 84 aa8.35□□□□□ -1.07
PCDHGA1-201ENST00000378105 SCGB1D4Q6XE38 83 aa8.35□□□□□ -1.07
PCDHGA1-201ENST00000378105 FAM231DQ6ZW35 169 aa8.35□□□□□ -1.07
PCDHGA1-201ENST00000378105 OR11H6Q8NGC7 330 aa8.35□□□□□ -1.07
PCDHGA1-201ENST00000378105 OVOL3O00110 214 aa8.35□□□□□ -1.07
PCDHGA1-201ENST00000378105 SS18Q15532 418 aa8.35□□□□□ -1.07
PCDHGA1-201ENST00000378105 CRIP3Q6Q6R5 217 aa8.35□□□□□ -1.07
PCDHGA1-201ENST00000378105 RITA1Q96K30 269 aa8.35□□□□□ -1.07
PCDHGA1-201ENST00000378105 Q9H3A6 140 aa8.35□□□□□ -1.07
PCDHGA1-201ENST00000378105 CHD6Q8TD26 2715 aa8.35□□□□□ -1.07
PCDHGA1-201ENST00000378105 TMEM14BQ9NUH8 114 aa8.34□□□□□ -1.07
PCDHGA1-201ENST00000378105 AVPP01185 164 aa8.34□□□□□ -1.07
PCDHGA1-201ENST00000378105 CRYGDP07320 174 aa8.34□□□□□ -1.07
PCDHGA1-201ENST00000378105 BLCAPP62952 87 aa8.34□□□□□ -1.07
PCDHGA1-201ENST00000378105 Q1RN00 199 aa8.34□□□□□ -1.07
PCDHGA1-201ENST00000378105 Q6Q795 121 aa8.34□□□□□ -1.07
PCDHGA1-201ENST00000378105 PEX7O00628 323 aa8.34□□□□□ -1.07
PCDHGA1-201ENST00000378105 SYNJ2BPP57105 145 aa8.34□□□□□ -1.07
PCDHGA1-201ENST00000378105 PVRIGQ6DKI7 326 aa8.34□□□□□ -1.07
PCDHGA1-201ENST00000378105 C9JCJ5 164 aa8.34□□□□□ -1.08
PCDHGA1-201ENST00000378105 INS-IGF2F8WCM5 200 aa8.34□□□□□ -1.08
PCDHGA1-201ENST00000378105 RPS28P62857 69 aaKnown RBP8.34□□□□□ -1.08
PCDHGA1-201ENST00000378105 FOXC2Q99958 501 aa8.34□□□□□ -1.08
PCDHGA1-201ENST00000378105 M0R2P5 195 aa8.33□□□□□ -1.08
PCDHGA1-201ENST00000378105 Q6ZPA2 131 aa8.33□□□□□ -1.08
PCDHGA1-201ENST00000378105 NDUFA4L2Q9NRX3 87 aa8.33□□□□□ -1.08
PCDHGA1-201ENST00000378105 SMKR1H3BMG3 65 aa8.33□□□□□ -1.08
PCDHGA1-201ENST00000378105 ELANEP08246 267 aa8.33□□□□□ -1.08
PCDHGA1-201ENST00000378105 TCRAP04437 139 aa8.33□□□□□ -1.08
PCDHGA1-201ENST00000378105 Q8N7P7 452 aa8.33□□□□□ -1.08
PCDHGA1-201ENST00000378105 TWIST1Q15672 202 aa8.32□□□□□ -1.08
PCDHGA1-201ENST00000378105 FAM74A4Q5TZK3 123 aa8.32□□□□□ -1.08
PCDHGA1-201ENST00000378105 TXNDC17Q9BRA2 123 aa8.32□□□□□ -1.08
PCDHGA1-201ENST00000378105 IGLV2-8P01709 118 aa8.32□□□□□ -1.08
PCDHGA1-201ENST00000378105 C9orf85Q96MD7 179 aa8.32□□□□□ -1.08
PCDHGA1-201ENST00000378105 U3KQE9 123 aa8.32□□□□□ -1.08
PCDHGA1-201ENST00000378105 APCP25054 2843 aa8.31□□□□□ -1.08
PCDHGA1-201ENST00000378105 M0R3E3 92 aa8.31□□□□□ -1.08
PCDHGA1-201ENST00000378105 SPRY2O43597 315 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms