RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 LINC01587Q99440 93 aa10.63□□□□□ -0.71
SMPDL3B-201ENST00000373888 TPPP3Q9BW30 176 aa10.63□□□□□ -0.71
SMPDL3B-201ENST00000373888 SSBP4Q9BWG4 385 aaPredicted RBP10.63□□□□□ -0.71
SMPDL3B-201ENST00000373888 MUC21Q5SSG8 566 aa10.62□□□□□ -0.71
SMPDL3B-201ENST00000373888 ZNF575Q86XF7 245 aa10.62□□□□□ -0.71
SMPDL3B-201ENST00000373888 SAMD10Q9BYL1 202 aa10.62□□□□□ -0.71
SMPDL3B-201ENST00000373888 SCGB1A1P11684 91 aa10.61□□□□□ -0.71
SMPDL3B-201ENST00000373888 DEFB135Q30KP9 77 aa10.61□□□□□ -0.71
SMPDL3B-201ENST00000373888 DEFB121Q5J5C9 76 aa10.61□□□□□ -0.71
SMPDL3B-201ENST00000373888 IGHV3OR16-12A0A075B7B8 117 aa10.6□□□□□ -0.71
SMPDL3B-201ENST00000373888 LINC00310P59036 64 aa10.6□□□□□ -0.71
SMPDL3B-201ENST00000373888 RNF183Q96D59 192 aa10.6□□□□□ -0.71
SMPDL3B-201ENST00000373888 RCHY1Q96PM5 261 aa10.6□□□□□ -0.71
SMPDL3B-201ENST00000373888 A0A1B0GV72 72 aa10.59□□□□□ -0.71
SMPDL3B-201ENST00000373888 EREGO14944 169 aa10.59□□□□□ -0.71
SMPDL3B-201ENST00000373888 CACNG7P62955 275 aa10.59□□□□□ -0.71
SMPDL3B-201ENST00000373888 MRAPQ8TCY5 172 aa10.59□□□□□ -0.71
SMPDL3B-201ENST00000373888 TP53TG1Q9Y2A0 90 aa10.59□□□□□ -0.71
SMPDL3B-201ENST00000373888 TRGV11A0A075B6L2 103 aa10.58□□□□□ -0.72
SMPDL3B-201ENST00000373888 GNRH2O43555 120 aa10.58□□□□□ -0.72
SMPDL3B-201ENST00000373888 NUPR1O60356 82 aa10.58□□□□□ -0.72
SMPDL3B-201ENST00000373888 OR5AL1P0C617 328 aa10.58□□□□□ -0.72
SMPDL3B-201ENST00000373888 MED14OSP0DP75 135 aa10.58□□□□□ -0.72
SMPDL3B-201ENST00000373888 TWIST1Q15672 202 aa10.58□□□□□ -0.72
SMPDL3B-201ENST00000373888 FAM104BQ5XKR9 115 aa10.58□□□□□ -0.72
SMPDL3B-201ENST00000373888 CHCHD1Q96BP2 118 aaKnown RBP10.58□□□□□ -0.72
SMPDL3B-201ENST00000373888 SNHG12Q9BXW3 62 aa10.58□□□□□ -0.72
SMPDL3B-201ENST00000373888 TMEM191AQ9H0A3 160 aa10.58□□□□□ -0.72
SMPDL3B-201ENST00000373888 C20orf202A1L168 122 aa10.58□□□□□ -0.72
SMPDL3B-201ENST00000373888 SPRY2O43597 315 aa10.58□□□□□ -0.72
SMPDL3B-201ENST00000373888 HSBP1O75506 76 aa10.58□□□□□ -0.72
SMPDL3B-201ENST00000373888 PRM2P04554 102 aa10.58□□□□□ -0.72
SMPDL3B-201ENST00000373888 HTN1P15515 57 aa10.58□□□□□ -0.72
SMPDL3B-201ENST00000373888 AMTP48728 403 aa10.58□□□□□ -0.72
SMPDL3B-201ENST00000373888 IQCJQ1A5X6 159 aa10.58□□□□□ -0.72
SMPDL3B-201ENST00000373888 SBSPONQ8IVN8 264 aa10.58□□□□□ -0.72
SMPDL3B-201ENST00000373888 VPS25Q9BRG1 176 aa10.58□□□□□ -0.72
SMPDL3B-201ENST00000373888 X6R8D5 127 aa10.58□□□□□ -0.72
SMPDL3B-201ENST00000373888 IGHV3-16A0A0C4DH30 117 aa10.57□□□□□ -0.72
SMPDL3B-201ENST00000373888 SMIM9A6NGZ8 99 aa10.57□□□□□ -0.72
SMPDL3B-201ENST00000373888 SNAI2O43623 268 aa10.57□□□□□ -0.72
SMPDL3B-201ENST00000373888 PMCHP20382 165 aa10.57□□□□□ -0.72
SMPDL3B-201ENST00000373888 NTF3P20783 257 aa10.57□□□□□ -0.72
SMPDL3B-201ENST00000373888 ASIPP42127 132 aa10.57□□□□□ -0.72
SMPDL3B-201ENST00000373888 RRN3P1Q2M238 152 aa10.57□□□□□ -0.72
SMPDL3B-201ENST00000373888 OVOL2Q9BRP0 275 aa10.57□□□□□ -0.72
SMPDL3B-201ENST00000373888 MEGF8Q7Z7M0 2845 aa10.57□□□□□ -0.72
SMPDL3B-201ENST00000373888 IGHV4-4A0A075B6R2 117 aa10.56□□□□□ -0.72
SMPDL3B-201ENST00000373888 RNASE3P12724 160 aaKnown RBP10.56□□□□□ -0.72
SMPDL3B-201ENST00000373888 AZU1P20160 251 aa10.56□□□□□ -0.72
SMPDL3B-201ENST00000373888 C11orf72Q8NBR9 251 aa10.56□□□□□ -0.72
SMPDL3B-201ENST00000373888 OR11H2Q8NH07 326 aa10.56□□□□□ -0.72
SMPDL3B-201ENST00000373888 TMEM263Q8WUH6 116 aaKnown RBP10.56□□□□□ -0.72
SMPDL3B-201ENST00000373888 S100A4P26447 101 aaKnown RBP10.55□□□□□ -0.72
SMPDL3B-201ENST00000373888 ORMDL3Q8N138 153 aa10.55□□□□□ -0.72
SMPDL3B-201ENST00000373888 C16orf74Q96GX8 76 aa10.55□□□□□ -0.72
SMPDL3B-201ENST00000373888 TM2D3Q9BRN9 247 aa10.55□□□□□ -0.72
SMPDL3B-201ENST00000373888 MDFICQ9P1T7 246 aa10.55□□□□□ -0.72
SMPDL3B-201ENST00000373888 U3KQK5 164 aa10.55□□□□□ -0.72
SMPDL3B-201ENST00000373888 NBEAL2Q6ZNJ1 2754 aa10.54□□□□□ -0.72
SMPDL3B-201ENST00000373888 H3BVH4 76 aa10.54□□□□□ -0.72
SMPDL3B-201ENST00000373888 ZNF415Q09FC8 603 aa10.54□□□□□ -0.72
SMPDL3B-201ENST00000373888 RNASEKQ6P5S7 137 aaKnown RBP10.54□□□□□ -0.72
SMPDL3B-201ENST00000373888 NIT1Q86X76 327 aa10.54□□□□□ -0.72
SMPDL3B-201ENST00000373888 ORAOV1Q8WV07 137 aa10.54□□□□□ -0.72
SMPDL3B-201ENST00000373888 C9orf85Q96MD7 179 aa10.54□□□□□ -0.72
SMPDL3B-201ENST00000373888 SCRT2Q9NQ03 307 aa10.54□□□□□ -0.72
SMPDL3B-201ENST00000373888 LAMTOR2Q9Y2Q5 125 aa10.54□□□□□ -0.72
SMPDL3B-201ENST00000373888 PLAC8L1A1L4L8 177 aa10.53□□□□□ -0.72
SMPDL3B-201ENST00000373888 MIFP14174 115 aa10.53□□□□□ -0.72
SMPDL3B-201ENST00000373888 IL17DQ8TAD2 202 aa10.53□□□□□ -0.72
SMPDL3B-201ENST00000373888 B9D2Q9BPU9 175 aa10.53□□□□□ -0.72
SMPDL3B-201ENST00000373888 SPATA25Q9BR10 227 aa10.53□□□□□ -0.72
SMPDL3B-201ENST00000373888 PRO1933Q9H354 126 aa10.53□□□□□ -0.72
SMPDL3B-201ENST00000373888 RETNQ9HD89 108 aa10.53□□□□□ -0.72
SMPDL3B-201ENST00000373888 MRPL51Q4U2R6 128 aaKnown RBP10.53□□□□□ -0.72
SMPDL3B-201ENST00000373888 AMN1Q8IY45 258 aa10.53□□□□□ -0.72
SMPDL3B-201ENST00000373888 PRELID3AQ96N28 172 aa10.53□□□□□ -0.72
SMPDL3B-201ENST00000373888 SCGB1D1O95968 90 aa10.52□□□□□ -0.73
SMPDL3B-201ENST00000373888 CKS2P33552 79 aa10.52□□□□□ -0.73
SMPDL3B-201ENST00000373888 SPANXN1Q5VSR9 72 aa10.52□□□□□ -0.73
SMPDL3B-201ENST00000373888 Q8NAQ8 132 aa10.52□□□□□ -0.73
SMPDL3B-201ENST00000373888 IGHV4-28A0A0C4DH34 117 aa10.51□□□□□ -0.73
SMPDL3B-201ENST00000373888 D6R8Y8 96 aa10.51□□□□□ -0.73
SMPDL3B-201ENST00000373888 MTURNQ8N3F0 131 aa10.51□□□□□ -0.73
SMPDL3B-201ENST00000373888 TIMM8BQ9Y5J9 83 aaPredicted RBP10.51□□□□□ -0.73
SMPDL3B-201ENST00000373888 DAZ2Q13117 558 aaKnown RBP10.5□□□□□ -0.73
SMPDL3B-201ENST00000373888 COL5A1-AS1Q5SY13 56 aa10.5□□□□□ -0.73
SMPDL3B-201ENST00000373888 FA2HQ7L5A8 372 aa10.5□□□□□ -0.73
SMPDL3B-201ENST00000373888 OR10AG1Q8NH19 301 aa10.5□□□□□ -0.73
SMPDL3B-201ENST00000373888 PRSS3P2Q8NHM4 247 aa10.5□□□□□ -0.73
SMPDL3B-201ENST00000373888 PHLDA3Q9Y5J5 127 aa10.5□□□□□ -0.73
SMPDL3B-201ENST00000373888 MUC21A0A0G2JKD1 596 aa10.49□□□□□ -0.73
SMPDL3B-201ENST00000373888 MUC21A0A140T8X8 626 aa10.49□□□□□ -0.73
SMPDL3B-201ENST00000373888 NXPH4O95158 308 aa10.49□□□□□ -0.73
SMPDL3B-201ENST00000373888 PTTG1IPP53801 180 aa10.49□□□□□ -0.73
SMPDL3B-201ENST00000373888 RNF151Q2KHN1 245 aa10.49□□□□□ -0.73
SMPDL3B-201ENST00000373888 PTH2Q96A98 100 aa10.49□□□□□ -0.73
SMPDL3B-201ENST00000373888 URB1-AS1Q96HZ7 61 aa10.49□□□□□ -0.73
SMPDL3B-201ENST00000373888 ZMAT4Q9H898 229 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms