RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 TRBV12-3P01733 135 aa11.16□□□□□ -0.62
COL9A2-202ENST00000372748 TMEM170BQ5T4T1 132 aa11.16□□□□□ -0.62
COL9A2-202ENST00000372748 OR10J6PQ8NGY7 276 aa11.16□□□□□ -0.62
COL9A2-202ENST00000372748 SCGB1C2P0DMR2 95 aa11.15□□□□□ -0.62
COL9A2-202ENST00000372748 TRBV7-1A0A0A6YYK4 115 aa11.15□□□□□ -0.62
COL9A2-202ENST00000372748 NPFFO15130 113 aa11.15□□□□□ -0.62
COL9A2-202ENST00000372748 CFC1BP0CG36 223 aa11.15□□□□□ -0.62
COL9A2-202ENST00000372748 CFC1P0CG37 223 aa11.15□□□□□ -0.62
COL9A2-202ENST00000372748 C9orf139Q6ZV77 190 aa11.15□□□□□ -0.62
COL9A2-202ENST00000372748 TEN1Q86WV5 123 aa11.15□□□□□ -0.62
COL9A2-202ENST00000372748 ZNF462Q96JM2 2506 aa11.15□□□□□ -0.63
COL9A2-202ENST00000372748 C19orf84I3L1E1 186 aa11.14□□□□□ -0.63
COL9A2-202ENST00000372748 RNASE3P12724 160 aaKnown RBP11.14□□□□□ -0.63
COL9A2-202ENST00000372748 BRD3OSQ6XYD6 125 aa11.14□□□□□ -0.63
COL9A2-202ENST00000372748 PPDPFLQ8WWR9 84 aa11.14□□□□□ -0.63
COL9A2-202ENST00000372748 RAX2Q96IS3 184 aa11.14□□□□□ -0.63
COL9A2-202ENST00000372748 MUC4Q99102 2169 aa11.14□□□□□ -0.63
COL9A2-202ENST00000372748 SPG11Q96JI7 2443 aa11.14□□□□□ -0.63
COL9A2-202ENST00000372748 A0A087WWL8 130 aa11.14□□□□□ -0.63
COL9A2-202ENST00000372748 LINC00477Q96M19 166 aa11.14□□□□□ -0.63
COL9A2-202ENST00000372748 FAM208BQ5VWN6 2430 aa11.13□□□□□ -0.63
COL9A2-202ENST00000372748 HERVK_113P61574 105 aa11.13□□□□□ -0.63
COL9A2-202ENST00000372748 C5orf56Q8N8D9 126 aa11.13□□□□□ -0.63
COL9A2-202ENST00000372748 H7C2G1 150 aa11.13□□□□□ -0.63
COL9A2-202ENST00000372748 IGHV3-30P01768 117 aa11.13□□□□□ -0.63
COL9A2-202ENST00000372748 IGHV3-30-5P0DP03 117 aa11.13□□□□□ -0.63
COL9A2-202ENST00000372748 ANKRD29Q8N6D5 301 aa11.13□□□□□ -0.63
COL9A2-202ENST00000372748 IGIPA6NJ69 53 aa11.12□□□□□ -0.63
COL9A2-202ENST00000372748 A8MWV9 139 aa11.12□□□□□ -0.63
COL9A2-202ENST00000372748 F5H697 171 aa11.12□□□□□ -0.63
COL9A2-202ENST00000372748 ZNRF2Q8NHG8 242 aa11.12□□□□□ -0.63
COL9A2-202ENST00000372748 LENEPQ9Y5L5 61 aa11.12□□□□□ -0.63
COL9A2-202ENST00000372748 ABCA2Q9BZC7 2435 aa11.12□□□□□ -0.63
COL9A2-202ENST00000372748 SRD5A1P18405 259 aa11.12□□□□□ -0.63
COL9A2-202ENST00000372748 GATA3P23771 443 aa11.12□□□□□ -0.63
COL9A2-202ENST00000372748 PMVKQ15126 192 aa11.12□□□□□ -0.63
COL9A2-202ENST00000372748 C10orf126Q8N4M7 172 aa11.11□□□□□ -0.63
COL9A2-202ENST00000372748 USP9XQ93008 2570 aaPredicted RBP11.11□□□□□ -0.63
COL9A2-202ENST00000372748 IGHV3-64A0A075B6Q5 118 aa11.11□□□□□ -0.63
COL9A2-202ENST00000372748 IGHV3-11P01762 117 aa11.11□□□□□ -0.63
COL9A2-202ENST00000372748 LYRM7Q5U5X0 104 aa11.11□□□□□ -0.63
COL9A2-202ENST00000372748 RNF183Q96D59 192 aa11.11□□□□□ -0.63
COL9A2-202ENST00000372748 OPRPNQ99935 248 aaPredicted RBP11.11□□□□□ -0.63
COL9A2-202ENST00000372748 CRIP2P52943 208 aaPredicted RBP11.1□□□□□ -0.63
COL9A2-202ENST00000372748 LINC00315P59091 139 aa11.1□□□□□ -0.63
COL9A2-202ENST00000372748 LRRK2Q5S007 2527 aa11.1□□□□□ -0.63
COL9A2-202ENST00000372748 TRAV41A0A0B4J266 112 aa11.1□□□□□ -0.63
COL9A2-202ENST00000372748 LY6EQ16553 131 aa11.1□□□□□ -0.63
COL9A2-202ENST00000372748 FAM74A4Q5TZK3 123 aa11.1□□□□□ -0.63
COL9A2-202ENST00000372748 TRPT1Q86TN4 253 aaKnown RBP11.1□□□□□ -0.63
COL9A2-202ENST00000372748 SLC25A29Q8N8R3 303 aa11.1□□□□□ -0.63
COL9A2-202ENST00000372748 PRO1854Q9UHT4 67 aa11.1□□□□□ -0.63
COL9A2-202ENST00000372748 OVOL1O14753 267 aa11.1□□□□□ -0.63
COL9A2-202ENST00000372748 SUMO4Q6EEV6 95 aa11.1□□□□□ -0.63
COL9A2-202ENST00000372748 ZNF256Q9Y2P7 627 aaPredicted RBP11.1□□□□□ -0.63
COL9A2-202ENST00000372748 ZNF688P0C7X2 276 aa11.09□□□□□ -0.63
COL9A2-202ENST00000372748 KLK9Q2XQG4 91 aa11.09□□□□□ -0.63
COL9A2-202ENST00000372748 PRORYQ9H606 182 aa11.09□□□□□ -0.63
COL9A2-202ENST00000372748 KLK9Q9UKQ9 250 aa11.09□□□□□ -0.63
COL9A2-202ENST00000372748 KIF25-AS1Q9Y6Z4 181 aa11.09□□□□□ -0.63
COL9A2-202ENST00000372748 TRBV20-1A0A075B6N2 111 aa11.09□□□□□ -0.63
COL9A2-202ENST00000372748 J3QQQ9 107 aa11.09□□□□□ -0.63
COL9A2-202ENST00000372748 SOCS3O14543 225 aa11.09□□□□□ -0.63
COL9A2-202ENST00000372748 A4D1N5 150 aa11.08□□□□□ -0.64
COL9A2-202ENST00000372748 SDHAF1A6NFY7 115 aa11.08□□□□□ -0.64
COL9A2-202ENST00000372748 C9JAW5 83 aa11.08□□□□□ -0.64
COL9A2-202ENST00000372748 PPP1R17O96001 155 aa11.08□□□□□ -0.64
COL9A2-202ENST00000372748 CSMD2Q7Z408 3487 aa11.08□□□□□ -0.64
COL9A2-202ENST00000372748 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.08□□□□□ -0.642e-7■■■■□ 20.5
COL9A2-202ENST00000372748 IGHV4-39P01824 125 aa11.08□□□□□ -0.64
COL9A2-202ENST00000372748 LGALS3P17931 250 aaKnown RBP11.08□□□□□ -0.64
COL9A2-202ENST00000372748 POLR2KP53803 58 aaKnown RBP11.08□□□□□ -0.64
COL9A2-202ENST00000372748 PAPPA-AS1Q5QFB9 102 aa11.08□□□□□ -0.64
COL9A2-202ENST00000372748 AMELXQ99217 191 aa11.08□□□□□ -0.64
COL9A2-202ENST00000372748 CHD6Q8TD26 2715 aa11.07□□□□□ -0.64
COL9A2-202ENST00000372748 EIF4EBP3O60516 100 aaPredicted RBP11.07□□□□□ -0.64
COL9A2-202ENST00000372748 TRAV2A0A0B4J234 112 aa11.07□□□□□ -0.64
COL9A2-202ENST00000372748 IGHV1-69DA0A0B4J2H0 117 aa11.07□□□□□ -0.64
COL9A2-202ENST00000372748 SLC25A20O43772 301 aa11.07□□□□□ -0.64
COL9A2-202ENST00000372748 GNLYP22749 145 aa11.07□□□□□ -0.64
COL9A2-202ENST00000372748 MOB4Q9Y3A3 225 aa11.07□□□□□ -0.64
COL9A2-202ENST00000372748 VCYO14598 125 aa11.06□□□□□ -0.64
COL9A2-202ENST00000372748 SBSPONQ8IVN8 264 aa11.06□□□□□ -0.64
COL9A2-202ENST00000372748 ANAPC13Q9BS18 74 aa11.06□□□□□ -0.64
COL9A2-202ENST00000372748 EDN2P20800 178 aa11.06□□□□□ -0.64
COL9A2-202ENST00000372748 ZNF876PQ49A33 203 aa11.06□□□□□ -0.64
COL9A2-202ENST00000372748 FAM159AQ6UWV7 190 aa11.06□□□□□ -0.64
COL9A2-202ENST00000372748 FAM19A4Q96LR4 140 aa11.06□□□□□ -0.64
COL9A2-202ENST00000372748 ERG28Q9UKR5 140 aa11.06□□□□□ -0.64
COL9A2-202ENST00000372748 IGHV4OR15-8A0A075B7B6 117 aa11.05□□□□□ -0.64
COL9A2-202ENST00000372748 A0A087WW49 117 aa11.05□□□□□ -0.64
COL9A2-202ENST00000372748 ELANEP08246 267 aa11.05□□□□□ -0.64
COL9A2-202ENST00000372748 IGHV4-38-2P0DP08 117 aa11.05□□□□□ -0.64
COL9A2-202ENST00000372748 ZNF580Q9UK33 172 aa11.05□□□□□ -0.64
COL9A2-202ENST00000372748 TRAV12-3A0A0B4J271 114 aa11.05□□□□□ -0.64
COL9A2-202ENST00000372748 IGHV4-61A0A0C4DH41 118 aa11.05□□□□□ -0.64
COL9A2-202ENST00000372748 PRB1P04280 392 aa11.05□□□□□ -0.64
COL9A2-202ENST00000372748 MED14OSP0DP75 135 aa11.05□□□□□ -0.64
COL9A2-202ENST00000372748 TMEM141Q96I45 108 aa11.05□□□□□ -0.64
COL9A2-202ENST00000372748 BEX4Q9NWD9 120 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms