RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 IGSF10Q6WRI0 2623 aa0.04□□□□□ -2.4
ECHDC1-201ENST00000368287 SSC5DA1L4H1 1573 aa0.04□□□□□ -2.4
ECHDC1-201ENST00000368287 NCOR2Q9Y618 2525 aa0.04□□□□□ -2.4
ECHDC1-201ENST00000368287 TRBV20-1A0A075B6N2 111 aa0.04□□□□□ -2.4
ECHDC1-201ENST00000368287 LINC00694P0DN24 101 aa0.04□□□□□ -2.4
ECHDC1-201ENST00000368287 CCL3L1P16619 93 aa0.04□□□□□ -2.4
ECHDC1-201ENST00000368287 CKS1BP61024 79 aa0.04□□□□□ -2.4
ECHDC1-201ENST00000368287 LINC01545Q5VT33 79 aa0.04□□□□□ -2.4
ECHDC1-201ENST00000368287 PYDC1Q8WXC3 89 aa0.04□□□□□ -2.4
ECHDC1-201ENST00000368287 SPANXA1Q9NS26 97 aa0.04□□□□□ -2.4
ECHDC1-201ENST00000368287 SPANXCQ9NY87 97 aa0.04□□□□□ -2.4
ECHDC1-201ENST00000368287 NDUFA12Q9UI09 145 aa0.04□□□□□ -2.4
ECHDC1-201ENST00000368287 ARHGEF10O15013 1369 aa0.04□□□□□ -2.4
ECHDC1-201ENST00000368287 FSIP2Q5CZC0 6907 aa0.04□□□□□ -2.4
ECHDC1-201ENST00000368287 SOGA1O94964 1423 aa0.04□□□□□ -2.4
ECHDC1-201ENST00000368287 F2Z2F3 143 aa0.03□□□□□ -2.4
ECHDC1-201ENST00000368287 YPEL1O60688 119 aa0.03□□□□□ -2.4
ECHDC1-201ENST00000368287 PITX3O75364 302 aa0.03□□□□□ -2.4
ECHDC1-201ENST00000368287 C20orf197Q8N268 126 aa0.03□□□□□ -2.4
ECHDC1-201ENST00000368287 Q96NJ1 140 aa0.03□□□□□ -2.4
ECHDC1-201ENST00000368287 PRR15LQ9BU68 103 aa0.03□□□□□ -2.4
ECHDC1-201ENST00000368287 SMIM3Q9BZL3 60 aa0.03□□□□□ -2.4
ECHDC1-201ENST00000368287 GSKIPQ9P0R6 139 aa0.03□□□□□ -2.4
ECHDC1-201ENST00000368287 NRXN2Q9P2S2 1712 aa0.03□□□□□ -2.4
ECHDC1-201ENST00000368287 UNC13AQ9UPW8 1703 aa0.03□□□□□ -2.4
ECHDC1-201ENST00000368287 PARP14Q460N5 1801 aa0.03□□□□□ -2.4
ECHDC1-201ENST00000368287 TRAV12-3A0A0B4J271 114 aa0.02□□□□□ -2.41
ECHDC1-201ENST00000368287 NCS1P62166 190 aa0.02□□□□□ -2.41
ECHDC1-201ENST00000368287 NDUFA11Q86Y39 141 aa0.02□□□□□ -2.41
ECHDC1-201ENST00000368287 AHCTF1Q8WYP5 2266 aa0.01□□□□□ -2.41
ECHDC1-201ENST00000368287 RBAKDNA6NC62 111 aa0.01□□□□□ -2.41
ECHDC1-201ENST00000368287 C4orf33Q8N1A6 199 aa0.01□□□□□ -2.41
ECHDC1-201ENST00000368287 PPP1R1CQ8WVI7 109 aa0.01□□□□□ -2.41
ECHDC1-201ENST00000368287 SPRR2GQ9BYE4 73 aa0.01□□□□□ -2.41
ECHDC1-201ENST00000368287 BPESC1Q9GZL8 116 aa0.01□□□□□ -2.41
ECHDC1-201ENST00000368287 ERG28Q9UKR5 140 aa0.01□□□□□ -2.41
ECHDC1-201ENST00000368287 ASXL3Q9C0F0 2248 aa0.01□□□□□ -2.41
ECHDC1-201ENST00000368287 LOC105371267A0A1B0GV96 52 aa0□□□□□ -2.41
ECHDC1-201ENST00000368287 CCDC179H3BU77 68 aa0□□□□□ -2.41
ECHDC1-201ENST00000368287 LAMB1P07942 1786 aa0□□□□□ -2.41
ECHDC1-201ENST00000368287 CDK13Q14004 1512 aaKnown RBP0□□□□□ -2.41
ECHDC1-201ENST00000368287 SPCS2Q15005 226 aa0□□□□□ -2.41
ECHDC1-201ENST00000368287 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0□□□□□ -2.41
ECHDC1-201ENST00000368287 COX7B2Q8TF08 81 aa0□□□□□ -2.41
ECHDC1-201ENST00000368287 BATF3Q9NR55 127 aa0□□□□□ -2.41
ECHDC1-201ENST00000368287 OVOS2A0A0J9YW53 1432 aa-0.01□□□□□ -2.41
ECHDC1-201ENST00000368287 OVOS2Q6IE36 1432 aa-0.01□□□□□ -2.41
ECHDC1-201ENST00000368287 MCRIP1C9JLW8 97 aa-0.01□□□□□ -2.41
ECHDC1-201ENST00000368287 NMBP08949 121 aa-0.01□□□□□ -2.41
ECHDC1-201ENST00000368287 COX4I1P13073 169 aa-0.01□□□□□ -2.41
ECHDC1-201ENST00000368287 SSBP1Q04837 148 aaKnown RBP-0.01□□□□□ -2.41
ECHDC1-201ENST00000368287 Q5BKY6 102 aa-0.01□□□□□ -2.41
ECHDC1-201ENST00000368287 MMGT1Q8N4V1 131 aa-0.01□□□□□ -2.41
ECHDC1-201ENST00000368287 VSTM2AQ8TAG5 236 aa-0.01□□□□□ -2.41
ECHDC1-201ENST00000368287 SMIM11BQ8TCY0 68 aa-0.01□□□□□ -2.41
ECHDC1-201ENST00000368287 DMBT1Q9UGM3 2413 aaPredicted RBP-0.01□□□□□ -2.41
ECHDC1-201ENST00000368287 CACNA1CQ13936 2221 aa-0.01□□□□□ -2.41
ECHDC1-201ENST00000368287 COL7A1Q02388 2944 aa-0.01□□□□□ -2.41
ECHDC1-201ENST00000368287 ADGRB1O14514 1584 aa-0.02□□□□□ -2.41
ECHDC1-201ENST00000368287 PRG4Q92954 1404 aaPredicted RBP-0.02□□□□□ -2.41
ECHDC1-201ENST00000368287 UBR5O95071 2799 aaPredicted RBP-0.02□□□□□ -2.41
ECHDC1-201ENST00000368287 UNC79Q9P2D8 2635 aa-0.02□□□□□ -2.41
ECHDC1-201ENST00000368287 TRBV7-1A0A0A6YYK4 115 aa-0.02□□□□□ -2.41
ECHDC1-201ENST00000368287 TSPAN19P0C672 248 aa-0.02□□□□□ -2.41
ECHDC1-201ENST00000368287 PIRTP0C851 137 aa-0.02□□□□□ -2.41
ECHDC1-201ENST00000368287 CTAGE3PQ8IX95 158 aa-0.02□□□□□ -2.41
ECHDC1-201ENST00000368287 C10orf82Q8WW14 230 aa-0.02□□□□□ -2.41
ECHDC1-201ENST00000368287 CEP152O94986 1710 aa-0.02□□□□□ -2.41
ECHDC1-201ENST00000368287 LAMC3Q9Y6N6 1575 aa-0.02□□□□□ -2.41
ECHDC1-201ENST00000368287 DISP2A7MBM2 1401 aa-0.03□□□□□ -2.41
ECHDC1-201ENST00000368287 TRGV1A0A0A0MS02 117 aa-0.03□□□□□ -2.41
ECHDC1-201ENST00000368287 V9GYV3 84 aa-0.03□□□□□ -2.41
ECHDC1-201ENST00000368287 CHD9Q3L8U1 2897 aa-0.04□□□□□ -2.42
ECHDC1-201ENST00000368287 CLPSL1A2RUU4 121 aa-0.04□□□□□ -2.42
ECHDC1-201ENST00000368287 M0R2Z0 102 aa-0.04□□□□□ -2.42
ECHDC1-201ENST00000368287 SPINK1P00995 79 aa-0.04□□□□□ -2.42
ECHDC1-201ENST00000368287 ACYP2P14621 99 aa-0.04□□□□□ -2.42
ECHDC1-201ENST00000368287 UBE2G1P62253 170 aa-0.04□□□□□ -2.42
ECHDC1-201ENST00000368287 SLC48A1Q6P1K1 146 aa-0.04□□□□□ -2.42
ECHDC1-201ENST00000368287 Q6ZUT4 128 aa-0.04□□□□□ -2.42
ECHDC1-201ENST00000368287 UNC13BO14795 1591 aa-0.04□□□□□ -2.42
ECHDC1-201ENST00000368287 MACF1Q9UPN3 7388 aaKnown RBP-0.05□□□□□ -2.42
ECHDC1-201ENST00000368287 K7ERU9 68 aa-0.05□□□□□ -2.42
ECHDC1-201ENST00000368287 COX6A2Q02221 97 aa-0.05□□□□□ -2.42
ECHDC1-201ENST00000368287 C9orf116Q5BN46 136 aaPredicted RBP-0.05□□□□□ -2.42
ECHDC1-201ENST00000368287 FAM74A4Q5TZK3 123 aa-0.05□□□□□ -2.42
ECHDC1-201ENST00000368287 SPANXN1Q5VSR9 72 aa-0.05□□□□□ -2.42
ECHDC1-201ENST00000368287 Q6ZRX8 168 aa-0.05□□□□□ -2.42
ECHDC1-201ENST00000368287 TSTD1Q8NFU3 115 aa-0.05□□□□□ -2.42
ECHDC1-201ENST00000368287 LZICQ8WZA0 190 aa-0.05□□□□□ -2.42
ECHDC1-201ENST00000368287 SAR1AQ9NR31 198 aa-0.05□□□□□ -2.42
ECHDC1-201ENST00000368287 TMEM242Q9NWH2 141 aa-0.05□□□□□ -2.42
ECHDC1-201ENST00000368287 SSPOA2VEC9 5147 aa-0.05□□□□□ -2.42
ECHDC1-201ENST00000368287 SIPA1L3O60292 1781 aaPredicted RBP-0.06□□□□□ -2.42
ECHDC1-201ENST00000368287 NPFFO15130 113 aa-0.06□□□□□ -2.42
ECHDC1-201ENST00000368287 APODP05090 189 aa-0.06□□□□□ -2.42
ECHDC1-201ENST00000368287 ALX1Q15699 326 aa-0.06□□□□□ -2.42
ECHDC1-201ENST00000368287 MAFIPQ8WZ33 124 aa-0.06□□□□□ -2.42
ECHDC1-201ENST00000368287 HIVEP3Q5T1R4 2406 aa-0.06□□□□□ -2.42
ECHDC1-201ENST00000368287 GOLGA3Q08378 1498 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms