RNA–Protein interactions for RNA: ENST00000355637.8

RBFOX1-203, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-203ENST00000355637 FANCD2OSQ96PS1 177 aa6.78□□□□□ -1.32
RBFOX1-203ENST00000355637 DCTN5Q9BTE1 182 aa6.78□□□□□ -1.32
RBFOX1-203ENST00000355637 PRRC2CQ9Y520 2896 aaKnown RBP6.78□□□□□ -1.32
RBFOX1-203ENST00000355637 TPRP12270 2363 aaKnown RBP6.78□□□□□ -1.32
RBFOX1-203ENST00000355637 DMDP11532 3685 aa6.78□□□□□ -1.32
RBFOX1-203ENST00000355637 TRBV30A0A0K0K1B3 111 aa6.78□□□□□ -1.32
RBFOX1-203ENST00000355637 C15orf61A6NNL5 157 aa6.78□□□□□ -1.32
RBFOX1-203ENST00000355637 DNAL4O96015 105 aa6.78□□□□□ -1.32
RBFOX1-203ENST00000355637 XCL1P47992 114 aa6.78□□□□□ -1.32
RBFOX1-203ENST00000355637 LY6G5BQ8NDX9 201 aa6.78□□□□□ -1.32
RBFOX1-203ENST00000355637 BPESC1Q9GZL8 116 aa6.78□□□□□ -1.32
RBFOX1-203ENST00000355637 XCL2Q9UBD3 114 aa6.78□□□□□ -1.32
RBFOX1-203ENST00000355637 CD69Q07108 199 aa6.78□□□□□ -1.32
RBFOX1-203ENST00000355637 TMEM75Q8N9X5 138 aa6.78□□□□□ -1.32
RBFOX1-203ENST00000355637 LEAP2Q969E1 77 aa6.78□□□□□ -1.32
RBFOX1-203ENST00000355637 TRBV7-6A0A0J9YX20 115 aa6.77□□□□□ -1.33
RBFOX1-203ENST00000355637 WFDC9Q8NEX5 89 aa6.77□□□□□ -1.33
RBFOX1-203ENST00000355637 ARRDC1-AS1Q9H2J1 176 aa6.77□□□□□ -1.33
RBFOX1-203ENST00000355637 TMEM223A0PJW6 202 aa6.77□□□□□ -1.33
RBFOX1-203ENST00000355637 OVOL3O00110 214 aa6.77□□□□□ -1.33
RBFOX1-203ENST00000355637 HILS1P60008 231 aa6.77□□□□□ -1.33
RBFOX1-203ENST00000355637 CNEP1R1Q8N9A8 125 aa6.77□□□□□ -1.33
RBFOX1-203ENST00000355637 ICE1Q9Y2F5 2266 aa6.77□□□□□ -1.33
RBFOX1-203ENST00000355637 TRGV8A0A0C4DH27 118 aa6.76□□□□□ -1.33
RBFOX1-203ENST00000355637 C11orf86A6NJI1 115 aa6.76□□□□□ -1.33
RBFOX1-203ENST00000355637 COX6B1P14854 86 aa6.76□□□□□ -1.33
RBFOX1-203ENST00000355637 ZNF826PQ6ZT77 177 aa6.76□□□□□ -1.33
RBFOX1-203ENST00000355637 FRYQ5TBA9 3013 aa6.76□□□□□ -1.33
RBFOX1-203ENST00000355637 SS18L1O75177 396 aaPredicted RBP6.76□□□□□ -1.33
RBFOX1-203ENST00000355637 TSPEAR-AS2P59090 65 aa6.76□□□□□ -1.33
RBFOX1-203ENST00000355637 ATP1A1-AS1Q5TC04 95 aa6.76□□□□□ -1.33
RBFOX1-203ENST00000355637 Q9UF83 564 aa6.76□□□□□ -1.33
RBFOX1-203ENST00000355637 MALRD1Q5VYJ5 2156 aa6.76□□□□□ -1.33
RBFOX1-203ENST00000355637 TRGV5A0A0B4J1U4 118 aa6.76□□□□□ -1.33
RBFOX1-203ENST00000355637 CCKP06307 115 aa6.76□□□□□ -1.33
RBFOX1-203ENST00000355637 LYZP61626 148 aa6.76□□□□□ -1.33
RBFOX1-203ENST00000355637 DEFB121Q5J5C9 76 aa6.76□□□□□ -1.33
RBFOX1-203ENST00000355637 RNF185Q96GF1 192 aa6.76□□□□□ -1.33
RBFOX1-203ENST00000355637 RP1L1Q8IWN7 2480 aaPredicted RBP6.75□□□□□ -1.33
RBFOX1-203ENST00000355637 PSPNO60542 156 aa6.75□□□□□ -1.33
RBFOX1-203ENST00000355637 APELAP0DMC3 54 aa6.75□□□□□ -1.33
RBFOX1-203ENST00000355637 I3L3M4 83 aa6.75□□□□□ -1.33
RBFOX1-203ENST00000355637 LST1O00453 97 aa6.75□□□□□ -1.33
RBFOX1-203ENST00000355637 WDR86Q86TI4 376 aa6.75□□□□□ -1.33
RBFOX1-203ENST00000355637 Q8IYB0 196 aa6.75□□□□□ -1.33
RBFOX1-203ENST00000355637 C11orf68Q9H3H3 251 aaKnown RBP6.75□□□□□ -1.33
RBFOX1-203ENST00000355637 SLC25A15Q9Y619 301 aa6.75□□□□□ -1.33
RBFOX1-203ENST00000355637 MAP1BP46821 2468 aaKnown RBP6.75□□□□□ -1.33
RBFOX1-203ENST00000355637 A0A087WZ39 114 aa6.75□□□□□ -1.33
RBFOX1-203ENST00000355637 PRB1P04280 392 aa6.75□□□□□ -1.33
RBFOX1-203ENST00000355637 COPS9Q8WXC6 57 aa6.75□□□□□ -1.33
RBFOX1-203ENST00000355637 PSMG3-AS1Q96PY0 264 aa6.75□□□□□ -1.33
RBFOX1-203ENST00000355637 TRAV12-1A0A0B4J245 112 aa6.74□□□□□ -1.33
RBFOX1-203ENST00000355637 F8WEM9 126 aa6.74□□□□□ -1.33
RBFOX1-203ENST00000355637 IGLV2-11P01706 119 aa6.74□□□□□ -1.33
RBFOX1-203ENST00000355637 BAALC-AS2P0C853 105 aa6.74□□□□□ -1.33
RBFOX1-203ENST00000355637 ERHP84090 104 aaKnown RBP6.74□□□□□ -1.33
RBFOX1-203ENST00000355637 PROP1O75360 226 aa6.74□□□□□ -1.33
RBFOX1-203ENST00000355637 NXPH4O95158 308 aa6.74□□□□□ -1.33
RBFOX1-203ENST00000355637 C2orf66Q6UXQ4 117 aa6.74□□□□□ -1.33
RBFOX1-203ENST00000355637 DSCAMO60469 2012 aa6.73□□□□□ -1.33
RBFOX1-203ENST00000355637 EIF4EBP1Q13541 118 aaPredicted RBP6.73□□□□□ -1.33
RBFOX1-203ENST00000355637 ADAMTSL4-AS1Q5T5F5 129 aa6.73□□□□□ -1.33
RBFOX1-203ENST00000355637 LYPD5Q6UWN5 251 aa6.73□□□□□ -1.33
RBFOX1-203ENST00000355637 EGR2P11161 476 aaPredicted RBP6.73□□□□□ -1.33
RBFOX1-203ENST00000355637 Q8TAT8 98 aa6.73□□□□□ -1.33
RBFOX1-203ENST00000355637 TNRC6BQ9UPQ9 1833 aaKnown RBP6.73□□□□□ -1.33
RBFOX1-203ENST00000355637 PRB3Q04118 309 aaPredicted RBP6.73□□□□□ -1.33
RBFOX1-203ENST00000355637 APOC4P55056 127 aa6.72□□□□□ -1.33
RBFOX1-203ENST00000355637 RMI2Q96E14 147 aa6.72□□□□□ -1.33
RBFOX1-203ENST00000355637 ZNF625Q96I27 306 aaPredicted RBP6.72□□□□□ -1.33
RBFOX1-203ENST00000355637 RBM12B-AS1Q9P1G2 102 aa6.72□□□□□ -1.33
RBFOX1-203ENST00000355637 SPRR3Q9UBC9 169 aa6.72□□□□□ -1.33
RBFOX1-203ENST00000355637 E7EUB6 86 aa6.72□□□□□ -1.33
RBFOX1-203ENST00000355637 H7BZZ5 65 aa6.72□□□□□ -1.33
RBFOX1-203ENST00000355637 TRGV3P03979 118 aa6.72□□□□□ -1.33
RBFOX1-203ENST00000355637 KLF14Q8TD94 323 aaPredicted RBP6.72□□□□□ -1.33
RBFOX1-203ENST00000355637 DCANP1Q8TF63 244 aa6.72□□□□□ -1.33
RBFOX1-203ENST00000355637 MRPL36Q9P0J6 103 aaKnown RBP6.72□□□□□ -1.33
RBFOX1-203ENST00000355637 TMEM14BQ9NUH8 114 aa6.71□□□□□ -1.33
RBFOX1-203ENST00000355637 IGHV1-2P23083 117 aa6.71□□□□□ -1.34
RBFOX1-203ENST00000355637 HCP5Q6MZN7 132 aa6.71□□□□□ -1.34
RBFOX1-203ENST00000355637 FAM216BQ8N7L0 139 aa6.71□□□□□ -1.34
RBFOX1-203ENST00000355637 MUC3AQ02505 3323 aa6.71□□□□□ -1.34
RBFOX1-203ENST00000355637 A0A1W2PNU3 283 aaPredicted RBP6.71□□□□□ -1.34
RBFOX1-203ENST00000355637 PRCDQ00LT1 54 aa6.71□□□□□ -1.34
RBFOX1-203ENST00000355637 RNF7Q9UBF6 113 aa6.71□□□□□ -1.34
RBFOX1-203ENST00000355637 LRCOL1A6NCL2 159 aa6.7□□□□□ -1.34
RBFOX1-203ENST00000355637 WISP2O76076 250 aa6.7□□□□□ -1.34
RBFOX1-203ENST00000355637 GRNP28799 593 aaKnown RBP6.7□□□□□ -1.34
RBFOX1-203ENST00000355637 UBE2E2Q96LR5 201 aa6.7□□□□□ -1.34
RBFOX1-203ENST00000355637 C14orf132Q9NPU4 83 aa6.7□□□□□ -1.34
RBFOX1-203ENST00000355637 GP9P14770 177 aa6.7□□□□□ -1.34
RBFOX1-203ENST00000355637 IGLV2-18A0A075B6J9 118 aa6.7□□□□□ -1.34
RBFOX1-203ENST00000355637 IGKV2-40A0A087WW87 121 aaPredicted RBP6.7□□□□□ -1.34
RBFOX1-203ENST00000355637 IGKV2D-40P01614 121 aaPredicted RBP6.7□□□□□ -1.34
RBFOX1-203ENST00000355637 SUB1P53999 127 aaKnown RBP eCLIP6.7□□□□□ -1.34
RBFOX1-203ENST00000355637 C10orf55Q5SWW7 151 aa6.7□□□□□ -1.34
RBFOX1-203ENST00000355637 CXXC4Q9H2H0 198 aa6.7□□□□□ -1.34
RBFOX1-203ENST00000355637 SPANXN1Q5VSR9 72 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms