RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 TM2D2Q9BX73 214 aa10.43□□□□□ -0.74
EBF3-201ENST00000355311 FOXI1Q12951 378 aa10.42□□□□□ -0.74
EBF3-201ENST00000355311 DEFB136Q30KP8 78 aa10.42□□□□□ -0.74
EBF3-201ENST00000355311 PGPEP1Q9NXJ5 209 aa10.42□□□□□ -0.74
EBF3-201ENST00000355311 TRBV7-1A0A0A6YYK4 115 aa10.42□□□□□ -0.74
EBF3-201ENST00000355311 PSMB2P49721 201 aa10.42□□□□□ -0.74
EBF3-201ENST00000355311 ZNF48Q96MX3 618 aaPredicted RBP10.42□□□□□ -0.74
EBF3-201ENST00000355311 PIMREGQ9BSJ6 248 aa10.42□□□□□ -0.74
EBF3-201ENST00000355311 MRPL16Q9NX20 251 aaKnown RBP10.42□□□□□ -0.74
EBF3-201ENST00000355311 U3KQK5 164 aa10.42□□□□□ -0.74
EBF3-201ENST00000355311 KLK9Q9UKQ9 250 aa10.41□□□□□ -0.74
EBF3-201ENST00000355311 DPM2O94777 84 aa10.41□□□□□ -0.74
EBF3-201ENST00000355311 OR10J6PQ8NGY7 276 aa10.41□□□□□ -0.74
EBF3-201ENST00000355311 IGHV3-73A0A0B4J1V6 119 aa10.41□□□□□ -0.74
EBF3-201ENST00000355311 A0A1B0GW15 77 aa10.41□□□□□ -0.74
EBF3-201ENST00000355311 RRN3P1Q2M238 152 aa10.41□□□□□ -0.74
EBF3-201ENST00000355311 SLC50A1Q9BRV3 221 aa10.41□□□□□ -0.74
EBF3-201ENST00000355311 PRSS29PA6NIE9 313 aa10.4□□□□□ -0.74
EBF3-201ENST00000355311 B5MCH6 92 aa10.4□□□□□ -0.74
EBF3-201ENST00000355311 LINC01559Q495D7 138 aa10.4□□□□□ -0.74
EBF3-201ENST00000355311 HLA-DRB4P13762 266 aa10.4□□□□□ -0.75
EBF3-201ENST00000355311 MORN3Q6PF18 240 aaPredicted RBP10.4□□□□□ -0.75
EBF3-201ENST00000355311 BEX4Q9NWD9 120 aaPredicted RBP10.4□□□□□ -0.75
EBF3-201ENST00000355311 HIGD1BQ9P298 99 aa10.4□□□□□ -0.75
EBF3-201ENST00000355311 HLA-DRB4X5D2U9 266 aa10.4□□□□□ -0.75
EBF3-201ENST00000355311 LINC01549A6NIU2 74 aa10.39□□□□□ -0.75
EBF3-201ENST00000355311 DEFB112Q30KQ8 113 aa10.39□□□□□ -0.75
EBF3-201ENST00000355311 TCTEX1D4Q5JR98 221 aa10.39□□□□□ -0.75
EBF3-201ENST00000355311 PSMG4Q5JS54 123 aa10.39□□□□□ -0.75
EBF3-201ENST00000355311 KHDC1LQ5JSQ8 128 aa10.39□□□□□ -0.75
EBF3-201ENST00000355311 C18orf65Q6ZTR6 163 aa10.39□□□□□ -0.75
EBF3-201ENST00000355311 Q6ZUT4 128 aa10.39□□□□□ -0.75
EBF3-201ENST00000355311 ZFAND2AQ8N6M9 145 aa10.39□□□□□ -0.75
EBF3-201ENST00000355311 ZMAT4Q9H898 229 aa10.38□□□□□ -0.75
EBF3-201ENST00000355311 SYNJ2BPP57105 145 aa10.38□□□□□ -0.75
EBF3-201ENST00000355311 HIST2H2BCQ6DN03 193 aa10.38□□□□□ -0.75
EBF3-201ENST00000355311 NRACQ8N912 160 aa10.38□□□□□ -0.75
EBF3-201ENST00000355311 MYOZ3Q8TDC0 251 aa10.38□□□□□ -0.75
EBF3-201ENST00000355311 C10orf105Q8TEF2 133 aa10.38□□□□□ -0.75
EBF3-201ENST00000355311 MSMBP08118 114 aa10.38□□□□□ -0.75
EBF3-201ENST00000355311 CD7P09564 240 aa10.38□□□□□ -0.75
EBF3-201ENST00000355311 PRORYQ9H606 182 aa10.38□□□□□ -0.75
EBF3-201ENST00000355311 HECTD1Q9ULT8 2610 aa10.37□□□□□ -0.75
EBF3-201ENST00000355311 TRBV20-1A0A075B6N2 111 aa10.37□□□□□ -0.75
EBF3-201ENST00000355311 KRTAP10-9P60411 292 aa10.37□□□□□ -0.75
EBF3-201ENST00000355311 RPL39P62891 51 aaKnown RBP10.37□□□□□ -0.75
EBF3-201ENST00000355311 GATD1Q8NB37 220 aa10.37□□□□□ -0.75
EBF3-201ENST00000355311 KLHL30-AS1Q8NEE0 82 aa10.37□□□□□ -0.75
EBF3-201ENST00000355311 PSMG3-AS1Q96PY0 264 aa10.37□□□□□ -0.75
EBF3-201ENST00000355311 ZNF256Q9Y2P7 627 aaPredicted RBP10.37□□□□□ -0.75
EBF3-201ENST00000355311 LAGE3Q14657 143 aa10.37□□□□□ -0.75
EBF3-201ENST00000355311 OPRPNQ99935 248 aaPredicted RBP10.37□□□□□ -0.75
EBF3-201ENST00000355311 RNF223E7ERA6 249 aa10.36□□□□□ -0.75
EBF3-201ENST00000355311 SPINK13Q1W4C9 94 aa10.36□□□□□ -0.75
EBF3-201ENST00000355311 CARD19Q96LW7 228 aa10.36□□□□□ -0.75
EBF3-201ENST00000355311 IGHV3-64A0A075B6Q5 118 aa10.36□□□□□ -0.75
EBF3-201ENST00000355311 RASL10AQ92737 203 aa10.36□□□□□ -0.75
EBF3-201ENST00000355311 C1QTNF4Q9BXJ3 329 aa10.36□□□□□ -0.75
EBF3-201ENST00000355311 HELZ2Q9BYK8 2649 aaKnown RBP10.36□□□□□ -0.75
EBF3-201ENST00000355311 HOXA3O43365 443 aaPredicted RBP10.35□□□□□ -0.75
EBF3-201ENST00000355311 SCGB3A1Q96QR1 104 aa10.35□□□□□ -0.75
EBF3-201ENST00000355311 ANAPC13Q9BS18 74 aa10.35□□□□□ -0.75
EBF3-201ENST00000355311 MDFICQ9P1T7 246 aa10.35□□□□□ -0.75
EBF3-201ENST00000355311 CFAP126Q5VTH2 177 aa10.35□□□□□ -0.75
EBF3-201ENST00000355311 C9orf47Q6ZRZ4 202 aa10.35□□□□□ -0.75
EBF3-201ENST00000355311 PLEKHB2Q96CS7 222 aa10.35□□□□□ -0.75
EBF3-201ENST00000355311 NXT2Q9NPJ8 142 aaKnown RBP10.35□□□□□ -0.75
EBF3-201ENST00000355311 TRBV7-3A0A075B6L6 115 aa10.35□□□□□ -0.75
EBF3-201ENST00000355311 SHISA2Q6UWI4 295 aa10.35□□□□□ -0.75
EBF3-201ENST00000355311 Q8N8P6 123 aa10.35□□□□□ -0.75
EBF3-201ENST00000355311 IGLV2-18A0A075B6J9 118 aa10.34□□□□□ -0.75
EBF3-201ENST00000355311 KNCNA6PVL3 124 aa10.34□□□□□ -0.75
EBF3-201ENST00000355311 ASIPP42127 132 aa10.34□□□□□ -0.75
EBF3-201ENST00000355311 U3KQE9 123 aa10.34□□□□□ -0.75
EBF3-201ENST00000355311 DUSP14O95147 198 aaKnown RBP10.33□□□□□ -0.76
EBF3-201ENST00000355311 RNASE3P12724 160 aaKnown RBP10.33□□□□□ -0.76
EBF3-201ENST00000355311 SCGB1D4Q6XE38 83 aa10.33□□□□□ -0.76
EBF3-201ENST00000355311 IGHG2P01859 326 aa10.33□□□□□ -0.76
EBF3-201ENST00000355311 SRSF9Q13242 221 aaKnown RBP eCLIP10.33□□□□□ -0.76
EBF3-201ENST00000355311 SETXQ7Z333 2677 aaKnown RBP10.33□□□□□ -0.76
EBF3-201ENST00000355311 GCN1Q92616 2671 aaKnown RBP10.33□□□□□ -0.76
EBF3-201ENST00000355311 TRAV21A0A0B4J279 112 aa10.32□□□□□ -0.76
EBF3-201ENST00000355311 C9orf139Q6ZV77 190 aa10.32□□□□□ -0.76
EBF3-201ENST00000355311 FASNP49327 2511 aaKnown RBP10.32□□□□□ -0.76
EBF3-201ENST00000355311 OR11H12B2RN74 326 aa10.32□□□□□ -0.76
EBF3-201ENST00000355311 SUMO2P61956 95 aaKnown RBP10.32□□□□□ -0.76
EBF3-201ENST00000355311 FAM159AQ6UWV7 190 aa10.32□□□□□ -0.76
EBF3-201ENST00000355311 C3orf56Q8N813 242 aa10.32□□□□□ -0.76
EBF3-201ENST00000355311 OR11H1Q8NG94 326 aa10.32□□□□□ -0.76
EBF3-201ENST00000355311 OR11H2Q8NH07 326 aa10.32□□□□□ -0.76
EBF3-201ENST00000355311 A6NDX4 124 aa10.32□□□□□ -0.76
EBF3-201ENST00000355311 FAM223BA6NKX1 122 aa10.32□□□□□ -0.76
EBF3-201ENST00000355311 H7C2G1 150 aa10.32□□□□□ -0.76
EBF3-201ENST00000355311 NDUFA4O00483 81 aa10.32□□□□□ -0.76
EBF3-201ENST00000355311 TSPAN13O95857 204 aa10.32□□□□□ -0.76
EBF3-201ENST00000355311 SRSF1Q07955 248 aaKnown RBP eCLIP10.32□□□□□ -0.76
EBF3-201ENST00000355311 RNASE13Q5GAN3 156 aaKnown RBP10.32□□□□□ -0.76
EBF3-201ENST00000355311 COX8CQ7Z4L0 72 aa10.32□□□□□ -0.76
EBF3-201ENST00000355311 FAM223AQ8IWN6 122 aa10.32□□□□□ -0.76
EBF3-201ENST00000355311 DAZ1Q9NQZ3 744 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms