RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 DSCAMO60469 2012 aa8.08□□□□□ -1.12
CAPN3-203ENST00000349748 TRAV13-1A0A0B4J241 112 aa8.08□□□□□ -1.12
CAPN3-203ENST00000349748 TSHBP01222 138 aa8.08□□□□□ -1.12
CAPN3-203ENST00000349748 FAM216BQ8N7L0 139 aa8.08□□□□□ -1.12
CAPN3-203ENST00000349748 ATP5G1P05496 136 aa8.07□□□□□ -1.12
CAPN3-203ENST00000349748 MALP21145 153 aa8.07□□□□□ -1.12
CAPN3-203ENST00000349748 SUMO2P61956 95 aaKnown RBP8.07□□□□□ -1.12
CAPN3-203ENST00000349748 COX8CQ7Z4L0 72 aa8.07□□□□□ -1.12
CAPN3-203ENST00000349748 PRO0628Q9UI54 55 aa8.07□□□□□ -1.12
CAPN3-203ENST00000349748 ATRXP46100 2492 aa8.07□□□□□ -1.12
CAPN3-203ENST00000349748 IGHV1-2P23083 117 aa8.07□□□□□ -1.12
CAPN3-203ENST00000349748 C5orf38Q86SI9 138 aa8.07□□□□□ -1.12
CAPN3-203ENST00000349748 ZNF491Q8N8L2 437 aa8.07□□□□□ -1.12
CAPN3-203ENST00000349748 RNF125Q96EQ8 232 aa8.07□□□□□ -1.12
CAPN3-203ENST00000349748 CCL13Q99616 98 aa8.07□□□□□ -1.12
CAPN3-203ENST00000349748 NBASA2RRP1 2371 aa8.07□□□□□ -1.12
CAPN3-203ENST00000349748 TRBV7-1A0A0A6YYK4 115 aa8.07□□□□□ -1.12
CAPN3-203ENST00000349748 RPL27AP46776 148 aaKnown RBP8.07□□□□□ -1.12
CAPN3-203ENST00000349748 SEC61GP60059 68 aa8.07□□□□□ -1.12
CAPN3-203ENST00000349748 SPANXN1Q5VSR9 72 aa8.07□□□□□ -1.12
CAPN3-203ENST00000349748 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-203ENST00000349748 ADARB2-AS1A8MUL3 147 aa8.06□□□□□ -1.12
CAPN3-203ENST00000349748 CCL3L1P16619 93 aa8.06□□□□□ -1.12
CAPN3-203ENST00000349748 DLX1P56177 255 aa8.06□□□□□ -1.12
CAPN3-203ENST00000349748 KLRB1Q12918 225 aa8.06□□□□□ -1.12
CAPN3-203ENST00000349748 TRGV5A0A0B4J1U4 118 aa8.05□□□□□ -1.12
CAPN3-203ENST00000349748 PRAC2D3DTV9 90 aa8.05□□□□□ -1.12
CAPN3-203ENST00000349748 PRSS2P07478 247 aa8.05□□□□□ -1.12
CAPN3-203ENST00000349748 DLX6P56179 175 aa8.05□□□□□ -1.12
CAPN3-203ENST00000349748 NPC2P61916 151 aa8.05□□□□□ -1.12
CAPN3-203ENST00000349748 VMA21Q3ZAQ7 101 aa8.05□□□□□ -1.12
CAPN3-203ENST00000349748 PVRIGQ6DKI7 326 aa8.05□□□□□ -1.12
CAPN3-203ENST00000349748 MDS2Q8NDY4 140 aa8.05□□□□□ -1.12
CAPN3-203ENST00000349748 DPH3P1Q9H4G8 78 aa8.05□□□□□ -1.12
CAPN3-203ENST00000349748 SPANXCQ9NY87 97 aa8.05□□□□□ -1.12
CAPN3-203ENST00000349748 ZNF580Q9UK33 172 aa8.05□□□□□ -1.12
CAPN3-203ENST00000349748 ZFYVE26Q68DK2 2539 aa8.05□□□□□ -1.12
CAPN3-203ENST00000349748 PKD1L2Q7Z442 2459 aa8.05□□□□□ -1.12
CAPN3-203ENST00000349748 TRAV12-3A0A0B4J271 114 aa8.05□□□□□ -1.12
CAPN3-203ENST00000349748 ATOX1O00244 68 aa8.05□□□□□ -1.12
CAPN3-203ENST00000349748 PFN2P35080 140 aa8.05□□□□□ -1.12
CAPN3-203ENST00000349748 DYNAPQ8N1N2 210 aa8.05□□□□□ -1.12
CAPN3-203ENST00000349748 C8orf31Q8N9H6 132 aa8.05□□□□□ -1.12
CAPN3-203ENST00000349748 TLN1Q9Y490 2541 aaKnown RBP8.05□□□□□ -1.12
CAPN3-203ENST00000349748 IGHV7-4-1A0A0J9YVY3 117 aa8.04□□□□□ -1.12
CAPN3-203ENST00000349748 I3L2K1 104 aa8.04□□□□□ -1.12
CAPN3-203ENST00000349748 LST1O00453 97 aa8.04□□□□□ -1.12
CAPN3-203ENST00000349748 CRYGBP07316 175 aa8.04□□□□□ -1.12
CAPN3-203ENST00000349748 RPL39P62891 51 aaKnown RBP8.04□□□□□ -1.12
CAPN3-203ENST00000349748 Q6ZT83 130 aa8.04□□□□□ -1.12
CAPN3-203ENST00000349748 ACYP1P07311 99 aa8.04□□□□□ -1.12
CAPN3-203ENST00000349748 MSMPQ1L6U9 139 aa8.04□□□□□ -1.12
CAPN3-203ENST00000349748 SDIM1Q6ZPB5 146 aa8.04□□□□□ -1.12
CAPN3-203ENST00000349748 TACC2O95359 2948 aa8.04□□□□□ -1.12
CAPN3-203ENST00000349748 IGHV3OR16-8A0A075B7F1 116 aa8.04□□□□□ -1.12
CAPN3-203ENST00000349748 SPRY3O43610 288 aa8.04□□□□□ -1.12
CAPN3-203ENST00000349748 COX6CP09669 75 aa8.04□□□□□ -1.12
CAPN3-203ENST00000349748 PDE6HQ13956 83 aa8.04□□□□□ -1.12
CAPN3-203ENST00000349748 MBD3L2Q8NHZ7 208 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-203ENST00000349748 UPK3BQ9BT76 320 aa8.04□□□□□ -1.12
CAPN3-203ENST00000349748 TP53TG1Q9Y2A0 90 aa8.04□□□□□ -1.12
CAPN3-203ENST00000349748 I3L3M4 83 aa8.03□□□□□ -1.12
CAPN3-203ENST00000349748 HIST1H4AP62805 103 aaKnown RBP8.03□□□□□ -1.12
CAPN3-203ENST00000349748 TMEM190Q8WZ59 177 aa8.03□□□□□ -1.12
CAPN3-203ENST00000349748 PEMTQ9UBM1 199 aa8.03□□□□□ -1.12
CAPN3-203ENST00000349748 RNF223E7ERA6 249 aa8.03□□□□□ -1.12
CAPN3-203ENST00000349748 FAM27E3Q08E93 113 aa8.03□□□□□ -1.12
CAPN3-203ENST00000349748 DCANP1Q8TF63 244 aa8.02□□□□□ -1.13
CAPN3-203ENST00000349748 GAFA1Q96PS6 74 aa8.02□□□□□ -1.13
CAPN3-203ENST00000349748 TEX22C9J3V5 150 aa8.02□□□□□ -1.13
CAPN3-203ENST00000349748 K7ENP7 123 aa8.02□□□□□ -1.13
CAPN3-203ENST00000349748 M0R381 172 aa8.02□□□□□ -1.13
CAPN3-203ENST00000349748 CXCL5P42830 114 aa8.02□□□□□ -1.13
CAPN3-203ENST00000349748 RNF182Q8N6D2 247 aa8.02□□□□□ -1.13
CAPN3-203ENST00000349748 SPANXDQ9BXN6 97 aa8.02□□□□□ -1.13
CAPN3-203ENST00000349748 AGPAT4-IT1Q9H0P7 198 aa8.02□□□□□ -1.13
CAPN3-203ENST00000349748 A0A087WVE0 104 aa8.01□□□□□ -1.13
CAPN3-203ENST00000349748 MGPP08493 103 aa8.01□□□□□ -1.13
CAPN3-203ENST00000349748 PRB3Q04118 309 aaPredicted RBP8.01□□□□□ -1.13
CAPN3-203ENST00000349748 TIMM21Q9BVV7 248 aa8.01□□□□□ -1.13
CAPN3-203ENST00000349748 COL6A6A6NMZ7 2263 aa8.01□□□□□ -1.13
CAPN3-203ENST00000349748 FAM236DA0A1B0GTK5 79 aa8.01□□□□□ -1.13
CAPN3-203ENST00000349748 FAM236CP0DP71 79 aa8.01□□□□□ -1.13
CAPN3-203ENST00000349748 RPL18AQ02543 176 aaKnown RBP8.01□□□□□ -1.13
CAPN3-203ENST00000349748 PAPPA-AS1Q5QFB9 102 aa8.01□□□□□ -1.13
CAPN3-203ENST00000349748 K7EIM0 57 aa8.01□□□□□ -1.13
CAPN3-203ENST00000349748 LINC00311Q8N616 119 aa8.01□□□□□ -1.13
CAPN3-203ENST00000349748 TMEM86BQ8N661 226 aa8.01□□□□□ -1.13
CAPN3-203ENST00000349748 CNEP1R1Q8N9A8 125 aa8.01□□□□□ -1.13
CAPN3-203ENST00000349748 OPRPNQ99935 248 aaPredicted RBP8.01□□□□□ -1.13
CAPN3-203ENST00000349748 SLC50A1Q9BRV3 221 aa8.01□□□□□ -1.13
CAPN3-203ENST00000349748 IGKV3D-7A0A0C4DH55 119 aa8□□□□□ -1.13
CAPN3-203ENST00000349748 IGIPA6NJ69 53 aa8□□□□□ -1.13
CAPN3-203ENST00000349748 LHBP01229 141 aa8□□□□□ -1.13
CAPN3-203ENST00000349748 IGKV3-15P01624 115 aa8□□□□□ -1.13
CAPN3-203ENST00000349748 SERP2Q8N6R1 65 aa8□□□□□ -1.13
CAPN3-203ENST00000349748 ARHGAP32A7KAX9 2087 aa8□□□□□ -1.13
CAPN3-203ENST00000349748 USP24Q9UPU5 2620 aa8□□□□□ -1.13
CAPN3-203ENST00000349748 WFDC11Q8NEX6 87 aa8□□□□□ -1.13
CAPN3-203ENST00000349748 LINC00574Q9H8X3 128 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms