RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 LENEPQ9Y5L5 61 aa6.89□□□□□ -1.31
ATG4A-202ENST00000345734 A6NDN8 102 aa6.89□□□□□ -1.31
ATG4A-202ENST00000345734 K7EQG2 157 aa6.89□□□□□ -1.31
ATG4A-202ENST00000345734 RNASE4P34096 147 aaKnown RBP6.89□□□□□ -1.31
ATG4A-202ENST00000345734 RPL32P62910 135 aaKnown RBP6.89□□□□□ -1.31
ATG4A-202ENST00000345734 Q6ZSN1 163 aa6.89□□□□□ -1.31
ATG4A-202ENST00000345734 DLX4Q92988 240 aaPredicted RBP6.89□□□□□ -1.31
ATG4A-202ENST00000345734 MSRB1Q9NZV6 116 aa6.89□□□□□ -1.31
ATG4A-202ENST00000345734 SS18L2Q9UHA2 77 aa6.89□□□□□ -1.31
ATG4A-202ENST00000345734 ERG28Q9UKR5 140 aa6.89□□□□□ -1.31
ATG4A-202ENST00000345734 NUDT3O95989 172 aa6.88□□□□□ -1.31
ATG4A-202ENST00000345734 PMCHP20382 165 aa6.88□□□□□ -1.31
ATG4A-202ENST00000345734 NTF3P20783 257 aa6.88□□□□□ -1.31
ATG4A-202ENST00000345734 TWIST1Q15672 202 aa6.88□□□□□ -1.31
ATG4A-202ENST00000345734 ZNF493Q6ZR52 646 aa6.88□□□□□ -1.31
ATG4A-202ENST00000345734 FAM19A2Q8N3H0 131 aa6.88□□□□□ -1.31
ATG4A-202ENST00000345734 OR9G4Q8NGQ1 327 aa6.88□□□□□ -1.31
ATG4A-202ENST00000345734 LINC01006Q8NI28 216 aa6.88□□□□□ -1.31
ATG4A-202ENST00000345734 URB1-AS1Q96HZ7 61 aa6.88□□□□□ -1.31
ATG4A-202ENST00000345734 CITED1Q99966 193 aa6.88□□□□□ -1.31
ATG4A-202ENST00000345734 TMEM160Q9NX00 188 aa6.88□□□□□ -1.31
ATG4A-202ENST00000345734 AMTP48728 403 aa6.88□□□□□ -1.31
ATG4A-202ENST00000345734 HILS1P60008 231 aa6.88□□□□□ -1.31
ATG4A-202ENST00000345734 AMN1Q8IY45 258 aa6.88□□□□□ -1.31
ATG4A-202ENST00000345734 WWC2-AS2Q96NR7 200 aa6.88□□□□□ -1.31
ATG4A-202ENST00000345734 VCX2Q9H322 139 aa6.88□□□□□ -1.31
ATG4A-202ENST00000345734 C7orf71A4D174 169 aa6.87□□□□□ -1.31
ATG4A-202ENST00000345734 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.87□□□□□ -1.31
ATG4A-202ENST00000345734 H3BRM9 83 aa6.87□□□□□ -1.31
ATG4A-202ENST00000345734 CSN3P07498 182 aa6.87□□□□□ -1.31
ATG4A-202ENST00000345734 C3orf79P0CE67 100 aa6.87□□□□□ -1.31
ATG4A-202ENST00000345734 SNRPD3P62318 126 aaKnown RBP6.87□□□□□ -1.31
ATG4A-202ENST00000345734 C5orf47Q569G3 176 aa6.87□□□□□ -1.31
ATG4A-202ENST00000345734 FAM104BQ5XKR9 115 aa6.87□□□□□ -1.31
ATG4A-202ENST00000345734 RNASEKQ6P5S7 137 aaKnown RBP6.87□□□□□ -1.31
ATG4A-202ENST00000345734 BOD1L2Q8IYS8 172 aa6.87□□□□□ -1.31
ATG4A-202ENST00000345734 PMCHL2Q9BQD1 86 aa6.87□□□□□ -1.31
ATG4A-202ENST00000345734 CNFNQ9BYD5 112 aa6.87□□□□□ -1.31
ATG4A-202ENST00000345734 C16orf95Q9H693 158 aa6.87□□□□□ -1.31
ATG4A-202ENST00000345734 FLNBO75369 2602 aaKnown RBP6.87□□□□□ -1.31
ATG4A-202ENST00000345734 TRAV21A0A0B4J279 112 aa6.86□□□□□ -1.31
ATG4A-202ENST00000345734 ZNF324O75467 553 aaPredicted RBP6.86□□□□□ -1.31
ATG4A-202ENST00000345734 IGKV3-20P01619 116 aa6.86□□□□□ -1.31
ATG4A-202ENST00000345734 APRG1Q8IVJ8 170 aa6.86□□□□□ -1.31
ATG4A-202ENST00000345734 OR2K2Q8NGT1 345 aa6.86□□□□□ -1.31
ATG4A-202ENST00000345734 OR10AG1Q8NH19 301 aa6.86□□□□□ -1.31
ATG4A-202ENST00000345734 PEMTQ9UBM1 199 aa6.86□□□□□ -1.31
ATG4A-202ENST00000345734 TSSC4Q9Y5U2 329 aaPredicted RBP6.86□□□□□ -1.31
ATG4A-202ENST00000345734 A0A0J9YX75 114 aa6.86□□□□□ -1.31
ATG4A-202ENST00000345734 H3BVH4 76 aa6.86□□□□□ -1.31
ATG4A-202ENST00000345734 SPRY2O43597 315 aa6.86□□□□□ -1.31
ATG4A-202ENST00000345734 TRIAP1O43715 76 aa6.86□□□□□ -1.31
ATG4A-202ENST00000345734 ANXA2RQ3ZCQ2 193 aa6.86□□□□□ -1.31
ATG4A-202ENST00000345734 MRPL51Q4U2R6 128 aaKnown RBP6.86□□□□□ -1.31
ATG4A-202ENST00000345734 SLC25A34Q6PIV7 304 aa6.86□□□□□ -1.31
ATG4A-202ENST00000345734 TIMM8BQ9Y5J9 83 aaPredicted RBP6.86□□□□□ -1.31
ATG4A-202ENST00000345734 FN1P02751 2386 aaKnown RBP6.86□□□□□ -1.31
ATG4A-202ENST00000345734 KLLNB2CW77 178 aa6.85□□□□□ -1.31
ATG4A-202ENST00000345734 D6R8Y8 96 aa6.85□□□□□ -1.31
ATG4A-202ENST00000345734 SMKR1H3BMG3 65 aa6.85□□□□□ -1.31
ATG4A-202ENST00000345734 SIVA1O15304 175 aa6.85□□□□□ -1.31
ATG4A-202ENST00000345734 IGLL1P15814 213 aa6.85□□□□□ -1.31
ATG4A-202ENST00000345734 TMEM61Q8N0U2 210 aa6.85□□□□□ -1.31
ATG4A-202ENST00000345734 MUC4Q99102 2169 aa6.85□□□□□ -1.31
ATG4A-202ENST00000345734 C2CD3Q4AC94 2353 aa6.85□□□□□ -1.31
ATG4A-202ENST00000345734 TRAV25A0A0B4J276 109 aa6.85□□□□□ -1.31
ATG4A-202ENST00000345734 A4D1N5 150 aa6.85□□□□□ -1.31
ATG4A-202ENST00000345734 INAFM1C9JVW0 142 aa6.85□□□□□ -1.31
ATG4A-202ENST00000345734 ERASQ7Z444 233 aa6.85□□□□□ -1.31
ATG4A-202ENST00000345734 RNF185Q96GF1 192 aa6.85□□□□□ -1.31
ATG4A-202ENST00000345734 TMEM191AQ9H0A3 160 aa6.85□□□□□ -1.31
ATG4A-202ENST00000345734 HSPB8Q9UJY1 196 aa6.85□□□□□ -1.31
ATG4A-202ENST00000345734 TRGV11A0A075B6L2 103 aa6.84□□□□□ -1.31
ATG4A-202ENST00000345734 TRAV12-2A0A075B6T6 113 aa6.84□□□□□ -1.31
ATG4A-202ENST00000345734 TEX48A0A1B0GUV7 120 aa6.84□□□□□ -1.31
ATG4A-202ENST00000345734 CCL24O00175 119 aa6.84□□□□□ -1.31
ATG4A-202ENST00000345734 GNRH2O43555 120 aa6.84□□□□□ -1.31
ATG4A-202ENST00000345734 SNAI2O43623 268 aa6.84□□□□□ -1.31
ATG4A-202ENST00000345734 HSBP1O75506 76 aa6.84□□□□□ -1.31
ATG4A-202ENST00000345734 NCR2O95944 276 aa6.84□□□□□ -1.31
ATG4A-202ENST00000345734 EBLN2Q6P2I7 272 aa6.84□□□□□ -1.31
ATG4A-202ENST00000345734 DYNLRB2Q8TF09 96 aa6.84□□□□□ -1.31
ATG4A-202ENST00000345734 U3KQK5 164 aa6.84□□□□□ -1.31
ATG4A-202ENST00000345734 TRAV12-3A0A0B4J271 114 aa6.83□□□□□ -1.32
ATG4A-202ENST00000345734 KNCNA6PVL3 124 aa6.83□□□□□ -1.32
ATG4A-202ENST00000345734 M0R2Z0 102 aa6.83□□□□□ -1.32
ATG4A-202ENST00000345734 GAS8-AS1O95177 125 aa6.83□□□□□ -1.32
ATG4A-202ENST00000345734 OR5AL1P0C617 328 aa6.83□□□□□ -1.32
ATG4A-202ENST00000345734 RPL24P83731 157 aaKnown RBP6.83□□□□□ -1.32
ATG4A-202ENST00000345734 DEFB114Q30KQ6 69 aa6.83□□□□□ -1.32
ATG4A-202ENST00000345734 SMIM20Q8N5G0 67 aa6.83□□□□□ -1.32
ATG4A-202ENST00000345734 PRELID3AQ96N28 172 aa6.83□□□□□ -1.32
ATG4A-202ENST00000345734 CYSLTR1Q9Y271 337 aa6.83□□□□□ -1.32
ATG4A-202ENST00000345734 JMJD1CQ15652 2540 aa6.83□□□□□ -1.32
ATG4A-202ENST00000345734 LOC389332A0A1B0GUA5 103 aa6.83□□□□□ -1.32
ATG4A-202ENST00000345734 EVI2AP22794 236 aa6.83□□□□□ -1.32
ATG4A-202ENST00000345734 DEFB131AP59861 70 aa6.83□□□□□ -1.32
ATG4A-202ENST00000345734 ORMDL3Q8N138 153 aa6.83□□□□□ -1.32
ATG4A-202ENST00000345734 NDUFA7O95182 113 aa6.82□□□□□ -1.32
ATG4A-202ENST00000345734 S100A4P26447 101 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms