RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 FANCD2OSQ96PS1 177 aa11.57□□□□□ -0.56
UBE3B-202ENST00000342494 FUSP35637 526 aaKnown RBP eCLIP11.57□□□□□ -0.56
UBE3B-202ENST00000342494 TEX22C9J3V5 150 aa11.56□□□□□ -0.56
UBE3B-202ENST00000342494 WISP2O76076 250 aa11.56□□□□□ -0.56
UBE3B-202ENST00000342494 PATE2Q6UY27 113 aa11.56□□□□□ -0.56
UBE3B-202ENST00000342494 NUP210Q8TEM1 1887 aaPredicted RBP11.56□□□□□ -0.56
UBE3B-202ENST00000342494 PTPN13Q12923 2485 aa11.56□□□□□ -0.56
UBE3B-202ENST00000342494 WI2-2373I1.2A0A1W2PRP0 233 aa11.56□□□□□ -0.56
UBE3B-202ENST00000342494 ZFP2Q6ZN57 461 aa11.56□□□□□ -0.56
UBE3B-202ENST00000342494 KLK12Q9UKR0 248 aa11.56□□□□□ -0.56
UBE3B-202ENST00000342494 CSPG4Q6UVK1 2322 aa11.55□□□□□ -0.56
UBE3B-202ENST00000342494 PRAC2D3DTV9 90 aa11.55□□□□□ -0.56
UBE3B-202ENST00000342494 C19orf84I3L1E1 186 aa11.55□□□□□ -0.56
UBE3B-202ENST00000342494 TNFRSF13BO14836 293 aaPredicted RBP11.55□□□□□ -0.56
UBE3B-202ENST00000342494 IL15RAQ13261 267 aa11.55□□□□□ -0.56
UBE3B-202ENST00000342494 ZNF747Q9BV97 191 aa11.55□□□□□ -0.56
UBE3B-202ENST00000342494 ETDBQ3ZM63 59 aa11.55□□□□□ -0.56
UBE3B-202ENST00000342494 DEFB125Q8N687 156 aa11.55□□□□□ -0.56
UBE3B-202ENST00000342494 COX7B2Q8TF08 81 aa11.55□□□□□ -0.56
UBE3B-202ENST00000342494 VSIG2Q96IQ7 327 aa11.55□□□□□ -0.56
UBE3B-202ENST00000342494 A0A0J9YXV3 536 aa11.55□□□□□ -0.56
UBE3B-202ENST00000342494 C9orf153Q5TBE3 101 aa11.54□□□□□ -0.56
UBE3B-202ENST00000342494 WFDC11Q8NEX6 87 aa11.54□□□□□ -0.56
UBE3B-202ENST00000342494 MSRB1Q9NZV6 116 aa11.54□□□□□ -0.56
UBE3B-202ENST00000342494 CACNA1AO00555 2505 aa11.54□□□□□ -0.56
UBE3B-202ENST00000342494 PRSS47A8MTI9 375 aa11.54□□□□□ -0.56
UBE3B-202ENST00000342494 NDUFA11Q86Y39 141 aa11.54□□□□□ -0.56
UBE3B-202ENST00000342494 SND1-IT1Q9HBX3 110 aa11.54□□□□□ -0.56
UBE3B-202ENST00000342494 K7ERJ3 54 aa11.54□□□□□ -0.56
UBE3B-202ENST00000342494 C9orf47Q6ZRZ4 202 aa11.54□□□□□ -0.56
UBE3B-202ENST00000342494 INAFM1C9JVW0 142 aa11.54□□□□□ -0.56
UBE3B-202ENST00000342494 Q6ZSR3 168 aa11.54□□□□□ -0.56
UBE3B-202ENST00000342494 C11orf45Q8TAV5 145 aa11.54□□□□□ -0.56
UBE3B-202ENST00000342494 CFC1BP0CG36 223 aa11.53□□□□□ -0.56
UBE3B-202ENST00000342494 CFC1P0CG37 223 aa11.53□□□□□ -0.56
UBE3B-202ENST00000342494 F8W1H4 67 aa11.53□□□□□ -0.56
UBE3B-202ENST00000342494 PRO0255Q9UI72 69 aa11.53□□□□□ -0.56
UBE3B-202ENST00000342494 TRBV12-3P01733 135 aa11.52□□□□□ -0.57
UBE3B-202ENST00000342494 UNQ9165/PRO28630Q6UXU0 137 aa11.52□□□□□ -0.57
UBE3B-202ENST00000342494 DEFB1P60022 68 aa11.52□□□□□ -0.57
UBE3B-202ENST00000342494 MSMPQ1L6U9 139 aa11.52□□□□□ -0.57
UBE3B-202ENST00000342494 TMEM263Q8WUH6 116 aaKnown RBP11.52□□□□□ -0.57
UBE3B-202ENST00000342494 NDUFS6O75380 124 aaKnown RBP11.52□□□□□ -0.57
UBE3B-202ENST00000342494 BAALC-AS2P0C853 105 aa11.52□□□□□ -0.57
UBE3B-202ENST00000342494 LMO4P61968 165 aa11.52□□□□□ -0.57
UBE3B-202ENST00000342494 SIVA1O15304 175 aa11.51□□□□□ -0.57
UBE3B-202ENST00000342494 SPAG11BQ08648 103 aa11.51□□□□□ -0.57
UBE3B-202ENST00000342494 IGHV4-28A0A0C4DH34 117 aa11.51□□□□□ -0.57
UBE3B-202ENST00000342494 NDUFB1O75438 58 aa11.51□□□□□ -0.57
UBE3B-202ENST00000342494 TRACP01848 142 aa11.51□□□□□ -0.57
UBE3B-202ENST00000342494 IGHV4-31P0DP07 118 aa11.51□□□□□ -0.57
UBE3B-202ENST00000342494 IFITM1P13164 125 aa11.51□□□□□ -0.57
UBE3B-202ENST00000342494 ZNF124Q15973 351 aa11.51□□□□□ -0.57
UBE3B-202ENST00000342494 C15orf53Q8NAA6 179 aa11.51□□□□□ -0.57
UBE3B-202ENST00000342494 C12orf74Q32Q52 190 aa11.51□□□□□ -0.57
UBE3B-202ENST00000342494 RNF183Q96D59 192 aa11.5□□□□□ -0.57
UBE3B-202ENST00000342494 MAP6D1Q9H9H5 199 aa11.5□□□□□ -0.57
UBE3B-202ENST00000342494 WNK1Q9H4A3 2382 aa11.5□□□□□ -0.57
UBE3B-202ENST00000342494 OPRPNQ99935 248 aaPredicted RBP11.5□□□□□ -0.57
UBE3B-202ENST00000342494 A0A1W2PPM0 123 aa11.5□□□□□ -0.57
UBE3B-202ENST00000342494 PROP1O75360 226 aa11.5□□□□□ -0.57
UBE3B-202ENST00000342494 ODF3L1Q8IXM7 274 aa11.5□□□□□ -0.57
UBE3B-202ENST00000342494 K7EP34 96 aa11.49□□□□□ -0.57
UBE3B-202ENST00000342494 A0A0J9YX75 114 aa11.49□□□□□ -0.57
UBE3B-202ENST00000342494 H3BMG7 143 aa11.49□□□□□ -0.57
UBE3B-202ENST00000342494 ANKHD1Q8IWZ3 2542 aaKnown RBP11.49□□□□□ -0.57
UBE3B-202ENST00000342494 CXCL5P42830 114 aa11.48□□□□□ -0.57
UBE3B-202ENST00000342494 NTN5Q8WTR8 489 aaPredicted RBP11.48□□□□□ -0.57
UBE3B-202ENST00000342494 NCR3O14931 201 aa11.48□□□□□ -0.57
UBE3B-202ENST00000342494 RPL39P62891 51 aaKnown RBP11.48□□□□□ -0.57
UBE3B-202ENST00000342494 C10orf91Q5T1B1 145 aa11.48□□□□□ -0.57
UBE3B-202ENST00000342494 E7EUB6 86 aa11.47□□□□□ -0.57
UBE3B-202ENST00000342494 H0YGX0 51 aa11.47□□□□□ -0.57
UBE3B-202ENST00000342494 Q6YL49 198 aa11.47□□□□□ -0.57
UBE3B-202ENST00000342494 NCKAP5O14513 1909 aa11.47□□□□□ -0.57
UBE3B-202ENST00000342494 PCP2Q8IVA1 136 aa11.47□□□□□ -0.57
UBE3B-202ENST00000342494 MED14OSP0DP75 135 aa11.47□□□□□ -0.57
UBE3B-202ENST00000342494 CRYBA4P53673 196 aa11.47□□□□□ -0.57
UBE3B-202ENST00000342494 ZNF843Q8N446 348 aa11.47□□□□□ -0.57
UBE3B-202ENST00000342494 SHISA2Q6UWI4 295 aa11.47□□□□□ -0.57
UBE3B-202ENST00000342494 ANKRD29Q8N6D5 301 aa11.47□□□□□ -0.57
UBE3B-202ENST00000342494 FAM167A-AS1Q96KT0 104 aa11.47□□□□□ -0.57
UBE3B-202ENST00000342494 RS1O15537 224 aa11.46□□□□□ -0.57
UBE3B-202ENST00000342494 CCL25O15444 150 aa11.46□□□□□ -0.57
UBE3B-202ENST00000342494 C14orf177Q52M58 125 aa11.46□□□□□ -0.57
UBE3B-202ENST00000342494 MDFICQ9P1T7 246 aa11.46□□□□□ -0.57
UBE3B-202ENST00000342494 MAJINQ3KP22 176 aa11.46□□□□□ -0.58
UBE3B-202ENST00000342494 NACAE9PAV3 2078 aa11.45□□□□□ -0.58
UBE3B-202ENST00000342494 HILS1P60008 231 aa11.45□□□□□ -0.58
UBE3B-202ENST00000342494 LINC01545Q5VT33 79 aa11.45□□□□□ -0.58
UBE3B-202ENST00000342494 SPANXDQ9BXN6 97 aa11.45□□□□□ -0.58
UBE3B-202ENST00000342494 TRAV26-1A0A087WT03 109 aa11.44□□□□□ -0.58
UBE3B-202ENST00000342494 MUSTN1Q8IVN3 82 aa11.44□□□□□ -0.58
UBE3B-202ENST00000342494 K7EP13 123 aa11.44□□□□□ -0.58
UBE3B-202ENST00000342494 IGKV2-24A0A0C4DH68 120 aa11.44□□□□□ -0.58
UBE3B-202ENST00000342494 ODF3BA8MYP8 253 aa11.44□□□□□ -0.58
UBE3B-202ENST00000342494 DAND5Q8N907 189 aa11.43□□□□□ -0.58
UBE3B-202ENST00000342494 Q6ZVH6 145 aa11.43□□□□□ -0.58
UBE3B-202ENST00000342494 TRBV10-1A0A0K0K1A3 114 aa11.43□□□□□ -0.58
UBE3B-202ENST00000342494 SPATA25Q9BR10 227 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms