RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 TOMM6Q96B49 74 aa14.32□□□□□ -0.12
HERPUD2-201ENST00000311350 CELSR1Q9NYQ6 3014 aa14.31□□□□□ -0.12
HERPUD2-201ENST00000311350 TRBV20-1A0A075B6N2 111 aa14.31□□□□□ -0.12
HERPUD2-201ENST00000311350 CRIP2P52943 208 aaPredicted RBP14.31□□□□□ -0.12
HERPUD2-201ENST00000311350 ARHGAP32A7KAX9 2087 aa14.31□□□□□ -0.12
HERPUD2-201ENST00000311350 C9orf47Q6ZRZ4 202 aa14.31□□□□□ -0.12
HERPUD2-201ENST00000311350 CITED1Q99966 193 aa14.31□□□□□ -0.12
HERPUD2-201ENST00000311350 CFC1BP0CG36 223 aa14.3□□□□□ -0.12
HERPUD2-201ENST00000311350 CFC1P0CG37 223 aa14.3□□□□□ -0.12
HERPUD2-201ENST00000311350 U3KQE9 123 aa14.3□□□□□ -0.12
HERPUD2-201ENST00000311350 A0A1W2PPR1 153 aa14.3□□□□□ -0.12
HERPUD2-201ENST00000311350 CRLF1O75462 422 aa14.3□□□□□ -0.12
HERPUD2-201ENST00000311350 UBE2E1P51965 193 aa14.3□□□□□ -0.12
HERPUD2-201ENST00000311350 SBSPONQ8IVN8 264 aa14.3□□□□□ -0.12
HERPUD2-201ENST00000311350 TRBV7-1A0A0A6YYK4 115 aa14.29□□□□□ -0.12
HERPUD2-201ENST00000311350 CLEC3BP05452 202 aa14.29□□□□□ -0.12
HERPUD2-201ENST00000311350 SCGB1C2P0DMR2 95 aa14.29□□□□□ -0.12
HERPUD2-201ENST00000311350 EEF1AKMT3Q96AZ1 226 aa14.29□□□□□ -0.12
HERPUD2-201ENST00000311350 LENEPQ9Y5L5 61 aa14.29□□□□□ -0.12
HERPUD2-201ENST00000311350 ABCA4P78363 2273 aa14.29□□□□□ -0.12
HERPUD2-201ENST00000311350 TRAV8-2A0A0B4J237 113 aa14.29□□□□□ -0.12
HERPUD2-201ENST00000311350 CCDC179H3BU77 68 aa14.29□□□□□ -0.12
HERPUD2-201ENST00000311350 J3KRW8 73 aa14.29□□□□□ -0.12
HERPUD2-201ENST00000311350 C2orf66Q6UXQ4 117 aa14.29□□□□□ -0.12
HERPUD2-201ENST00000311350 METTL26Q96S19 204 aa14.29□□□□□ -0.12
HERPUD2-201ENST00000311350 AKAP6Q13023 2319 aa14.28□□□□□ -0.12
HERPUD2-201ENST00000311350 IGHV3-49A0A0A0MS15 119 aa14.28□□□□□ -0.12
HERPUD2-201ENST00000311350 TRAV4A0A0B4J268 109 aa14.28□□□□□ -0.12
HERPUD2-201ENST00000311350 TRPT1Q86TN4 253 aaKnown RBP14.28□□□□□ -0.12
HERPUD2-201ENST00000311350 CCDC140Q96MF4 163 aa14.28□□□□□ -0.12
HERPUD2-201ENST00000311350 A0A0J9YY99 117 aa14.27□□□□□ -0.12
HERPUD2-201ENST00000311350 ZFP36P26651 326 aaKnown RBP14.27□□□□□ -0.12
HERPUD2-201ENST00000311350 SHISA2Q6UWI4 295 aa14.27□□□□□ -0.12
HERPUD2-201ENST00000311350 ATP6V0E1O15342 81 aa14.27□□□□□ -0.13
HERPUD2-201ENST00000311350 SUMO2P61956 95 aaKnown RBP14.26□□□□□ -0.13
HERPUD2-201ENST00000311350 RAX2Q96IS3 184 aa14.26□□□□□ -0.13
HERPUD2-201ENST00000311350 C11orf86A6NJI1 115 aa14.26□□□□□ -0.13
HERPUD2-201ENST00000311350 M0R381 172 aa14.26□□□□□ -0.13
HERPUD2-201ENST00000311350 IGF1P05019 195 aa14.26□□□□□ -0.13
HERPUD2-201ENST00000311350 CRYGDP07320 174 aa14.26□□□□□ -0.13
HERPUD2-201ENST00000311350 TSPEAR-AS2P59090 65 aa14.26□□□□□ -0.13
HERPUD2-201ENST00000311350 ECSCRQ19T08 205 aa14.26□□□□□ -0.13
HERPUD2-201ENST00000311350 ORMDL2Q53FV1 153 aa14.26□□□□□ -0.13
HERPUD2-201ENST00000311350 PRR9Q5T870 116 aa14.25□□□□□ -0.13
HERPUD2-201ENST00000311350 C9JAW5 83 aa14.25□□□□□ -0.13
HERPUD2-201ENST00000311350 RNF223E7ERA6 249 aa14.25□□□□□ -0.13
HERPUD2-201ENST00000311350 DUSP14O95147 198 aaKnown RBP14.24□□□□□ -0.13
HERPUD2-201ENST00000311350 IGHV3-30P01768 117 aa14.24□□□□□ -0.13
HERPUD2-201ENST00000311350 IGHV3-30-5P0DP03 117 aa14.24□□□□□ -0.13
HERPUD2-201ENST00000311350 C14orf178Q8N769 122 aaPredicted RBP14.24□□□□□ -0.13
HERPUD2-201ENST00000311350 RHODO00212 210 aa14.24□□□□□ -0.13
HERPUD2-201ENST00000311350 SLC25A20O43772 301 aa14.24□□□□□ -0.13
HERPUD2-201ENST00000311350 NDUFV3P56181 108 aaKnown RBP14.24□□□□□ -0.13
HERPUD2-201ENST00000311350 CLEC19AQ6UXS0 136 aa14.24□□□□□ -0.13
HERPUD2-201ENST00000311350 H7C2G1 150 aa14.23□□□□□ -0.13
HERPUD2-201ENST00000311350 SRD5A1P18405 259 aa14.23□□□□□ -0.13
HERPUD2-201ENST00000311350 DEFB113Q30KQ7 82 aa14.23□□□□□ -0.13
HERPUD2-201ENST00000311350 C10orf126Q8N4M7 172 aa14.23□□□□□ -0.13
HERPUD2-201ENST00000311350 EIF4EBP3O60516 100 aaPredicted RBP14.23□□□□□ -0.13
HERPUD2-201ENST00000311350 LYRM7Q5U5X0 104 aa14.23□□□□□ -0.13
HERPUD2-201ENST00000311350 VCX2Q9H322 139 aa14.23□□□□□ -0.13
HERPUD2-201ENST00000311350 UBTD1Q9HAC8 227 aa14.23□□□□□ -0.13
HERPUD2-201ENST00000311350 IGLV4-69A0A075B6H9 119 aa14.22□□□□□ -0.13
HERPUD2-201ENST00000311350 GAGE2BQ13066 116 aa14.22□□□□□ -0.13
HERPUD2-201ENST00000311350 GAGE2EQ4V326 116 aa14.22□□□□□ -0.13
HERPUD2-201ENST00000311350 C9orf139Q6ZV77 190 aa14.22□□□□□ -0.13
HERPUD2-201ENST00000311350 GAGE2DQ9UEU5 116 aa14.22□□□□□ -0.13
HERPUD2-201ENST00000311350 HIVEP1P15822 2718 aa14.22□□□□□ -0.13
HERPUD2-201ENST00000311350 CENPVL3A0A0U1RRI6 287 aa14.22□□□□□ -0.13
HERPUD2-201ENST00000311350 TMEM262E9PQX1 116 aa14.22□□□□□ -0.13
HERPUD2-201ENST00000311350 TSHBP01222 138 aa14.22□□□□□ -0.13
HERPUD2-201ENST00000311350 HERV-K104P63124 156 aa14.22□□□□□ -0.13
HERPUD2-201ENST00000311350 F8P00451 2351 aa14.22□□□□□ -0.13
HERPUD2-201ENST00000311350 TRBV7-9A0A0J9YWB2 115 aa14.21□□□□□ -0.13
HERPUD2-201ENST00000311350 MGPP08493 103 aa14.21□□□□□ -0.13
HERPUD2-201ENST00000311350 CFAP161Q6P656 301 aa14.21□□□□□ -0.13
HERPUD2-201ENST00000311350 ELANEP08246 267 aa14.21□□□□□ -0.13
HERPUD2-201ENST00000311350 SMIM20Q8N5G0 67 aa14.21□□□□□ -0.13
HERPUD2-201ENST00000311350 FAM223BA6NKX1 122 aa14.2□□□□□ -0.14
HERPUD2-201ENST00000311350 FAM223AQ8IWN6 122 aa14.2□□□□□ -0.14
HERPUD2-201ENST00000311350 BEX4Q9NWD9 120 aaPredicted RBP14.2□□□□□ -0.14
HERPUD2-201ENST00000311350 PRO1854Q9UHT4 67 aa14.2□□□□□ -0.14
HERPUD2-201ENST00000311350 MED14OSP0DP75 135 aa14.2□□□□□ -0.14
HERPUD2-201ENST00000311350 LINC00477Q96M19 166 aa14.2□□□□□ -0.14
HERPUD2-201ENST00000311350 SNCGO76070 127 aa14.19□□□□□ -0.14
HERPUD2-201ENST00000311350 SAA4P35542 130 aa14.19□□□□□ -0.14
HERPUD2-201ENST00000311350 C19orf54Q5BKX5 351 aa14.19□□□□□ -0.14
HERPUD2-201ENST00000311350 NTN5Q8WTR8 489 aaPredicted RBP14.19□□□□□ -0.14
HERPUD2-201ENST00000311350 GAGE12JA6NER3 117 aa14.19□□□□□ -0.14
HERPUD2-201ENST00000311350 GAGE7O76087 117 aa14.19□□□□□ -0.14
HERPUD2-201ENST00000311350 GAGE12FP0CL80 117 aa14.19□□□□□ -0.14
HERPUD2-201ENST00000311350 GAGE12GP0CL81 117 aa14.19□□□□□ -0.14
HERPUD2-201ENST00000311350 GAGE12IP0CL82 117 aa14.19□□□□□ -0.14
HERPUD2-201ENST00000311350 GAGE4Q13068 117 aa14.19□□□□□ -0.14
HERPUD2-201ENST00000311350 C5orf56Q8N8D9 126 aa14.19□□□□□ -0.14
HERPUD2-201ENST00000311350 CCL19Q99731 98 aa14.19□□□□□ -0.14
HERPUD2-201ENST00000311350 TEP1Q99973 2627 aaKnown RBP14.18□□□□□ -0.14
HERPUD2-201ENST00000311350 PRRC2AP48634 2157 aaKnown RBP14.18□□□□□ -0.14
HERPUD2-201ENST00000311350 G3V318 75 aa14.18□□□□□ -0.14
HERPUD2-201ENST00000311350 DEFB1P60022 68 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms