RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 COX7A2LO14548 114 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 C14orf178Q8N769 122 aaPredicted RBP3.13□□□□□ -1.91
USH2A-201ENST00000307340 TRGV1A0A0A0MS02 117 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 ATP6V0E1O15342 81 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 NCOR2Q9Y618 2525 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 IGKV1-6A0A0C4DH72 117 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 UNQ6494/PRO21346Q6UXR6 183 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 G3V4G9 280 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 LOXP28300 417 aaPredicted RBP3.13□□□□□ -1.91
USH2A-201ENST00000307340 IGLL1P15814 213 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 SPART-AS1P0CW21 52 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 KLHL30-AS1Q8NEE0 82 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 ZNF837Q96EG3 531 aaPredicted RBP3.13□□□□□ -1.91
USH2A-201ENST00000307340 ZNF503Q96F45 646 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 PATE3B3GLJ2 98 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 MUC4Q99102 2169 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 MDKP21741 143 aaPredicted RBP3.13□□□□□ -1.91
USH2A-201ENST00000307340 IGHV3-72A0A0B4J1Y9 119 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 NDUFA11Q86Y39 141 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 GTSF1Q8WW33 167 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 YPEL4Q96NS1 127 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 MLST8Q9BVC4 326 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 TOMM7Q9P0U1 55 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 ZNF706Q9Y5V0 76 aaPredicted RBP3.13□□□□□ -1.91
USH2A-201ENST00000307340 RSPO4Q2I0M5 234 aaPredicted RBP3.13□□□□□ -1.91
USH2A-201ENST00000307340 ATRAIDQ6UW56 229 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 Q6ZRM9 215 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 C5orf56Q8N8D9 126 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 PRR13Q9NZ81 148 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 MYO18BQ8IUG5 2567 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 NDUFS7O75251 213 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 H3BTX0 84 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 PTPN13Q12923 2485 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 FOXL2P58012 376 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 Q0VFX4 171 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 ADAMTSL5Q6ZMM2 481 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 WFDC11Q8NEX6 87 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 LINC00467Q9BRT7 94 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 ICOSQ9Y6W8 199 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 CELA2AP08217 269 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 PROK2Q9HC23 129 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 Q96MF0 132 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 PRO0255Q9UI72 69 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 WT1P19544 449 aaPredicted RBP3.12□□□□□ -1.91
USH2A-201ENST00000307340 TFF2Q03403 129 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 TPSG1Q9NRR2 321 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 PSCAO43653 123 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 IGHV4-39P01824 125 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 MIAQ16674 131 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 PIEZO2Q9H5I5 2752 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 ABCA2Q9BZC7 2435 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 HOXB4P17483 251 aaPredicted RBP3.12□□□□□ -1.91
USH2A-201ENST00000307340 HIST1H4AP62805 103 aaKnown RBP3.12□□□□□ -1.91
USH2A-201ENST00000307340 FOXI1Q12951 378 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 ODF1Q14990 250 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 TRAV26-2A0A0B4J265 109 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 NDUFA1O15239 70 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 UBE2AP49459 152 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 SPAARA0A1B0GVQ0 90 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 MYCNOSP40205 109 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 TLN1Q9Y490 2541 aaKnown RBP3.12□□□□□ -1.91
USH2A-201ENST00000307340 DAD1P61803 113 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 TEX22C9J3V5 150 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 TTC28Q96AY4 2481 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 TRIAP1O43715 76 aa3.12□□□□□ -1.91
USH2A-201ENST00000307340 TNFRSF13BO14836 293 aaPredicted RBP3.11□□□□□ -1.91
USH2A-201ENST00000307340 MBD6Q96DN6 1003 aa3.11□□□□□ -1.91
USH2A-201ENST00000307340 C10orf142B7Z368 130 aa3.11□□□□□ -1.91
USH2A-201ENST00000307340 E7EQL1 145 aa3.11□□□□□ -1.91
USH2A-201ENST00000307340 VSIRQ9H7M9 311 aa3.11□□□□□ -1.91
USH2A-201ENST00000307340 FAM167A-AS1Q96KT0 104 aa3.11□□□□□ -1.91
USH2A-201ENST00000307340 TRAV3A0A0B4J244 114 aa3.11□□□□□ -1.91
USH2A-201ENST00000307340 MIFP14174 115 aa3.11□□□□□ -1.91
USH2A-201ENST00000307340 AMTNQ6UX39 209 aa3.11□□□□□ -1.91
USH2A-201ENST00000307340 TMEM213A2RRL7 107 aa3.11□□□□□ -1.91
USH2A-201ENST00000307340 APELAP0DMC3 54 aa3.11□□□□□ -1.91
USH2A-201ENST00000307340 MRPL35Q9NZE8 188 aaKnown RBP3.11□□□□□ -1.91
USH2A-201ENST00000307340 A0A087WZ39 114 aa3.11□□□□□ -1.91
USH2A-201ENST00000307340 TRBV7-6A0A0J9YX20 115 aa3.11□□□□□ -1.91
USH2A-201ENST00000307340 CTSGP08311 255 aa3.11□□□□□ -1.91
USH2A-201ENST00000307340 SEC61GP60059 68 aa3.11□□□□□ -1.91
USH2A-201ENST00000307340 ETDBQ3ZM63 59 aa3.11□□□□□ -1.91
USH2A-201ENST00000307340 TRAV12-3A0A0B4J271 114 aa3.11□□□□□ -1.91
USH2A-201ENST00000307340 IGKV2-40A0A087WW87 121 aaPredicted RBP3.11□□□□□ -1.91
USH2A-201ENST00000307340 IGKV1-17P01599 117 aa3.11□□□□□ -1.91
USH2A-201ENST00000307340 IGKV2D-40P01614 121 aaPredicted RBP3.11□□□□□ -1.91
USH2A-201ENST00000307340 KMT2BQ9UMN6 2715 aaPredicted RBP3.11□□□□□ -1.91
USH2A-201ENST00000307340 TFPI2P48307 235 aa3.11□□□□□ -1.91
USH2A-201ENST00000307340 DHRS4-AS1Q9P1J3 65 aa3.11□□□□□ -1.91
USH2A-201ENST00000307340 LINC01546A6NGU7 62 aa3.11□□□□□ -1.91
USH2A-201ENST00000307340 UFSP1Q6NVU6 142 aa3.11□□□□□ -1.91
USH2A-201ENST00000307340 KLK5Q9Y337 293 aaPredicted RBP3.11□□□□□ -1.91
USH2A-201ENST00000307340 CGB3P0DN86 165 aa3.11□□□□□ -1.91
USH2A-201ENST00000307340 CGB7P0DN87 165 aa3.11□□□□□ -1.91
USH2A-201ENST00000307340 RSPO1Q2MKA7 263 aaPredicted RBP3.11□□□□□ -1.91
USH2A-201ENST00000307340 COL27A1Q8IZC6 1860 aaPredicted RBP3.11□□□□□ -1.91
USH2A-201ENST00000307340 CD164L2Q6UWJ8 174 aa3.11□□□□□ -1.91
USH2A-201ENST00000307340 WFDC3Q8IUB2 231 aa3.11□□□□□ -1.91
USH2A-201ENST00000307340 CENPVL3A0A0U1RRI6 287 aa3.1□□□□□ -1.91
USH2A-201ENST00000307340 PFN2P35080 140 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms