RNA–Protein interactions for RNA: ENST00000301480.4

ZNF560-201, Transcript of zinc finger protein 560, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF560, Length 2,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-201ENST00000301480 CR1P17927 2039 aa3.48□□□□□ -1.85
ZNF560-201ENST00000301480 TRBV20OR9-2A0A075B6H5 130 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 TRBV5-7A0A0A0MS05 114 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 IRGMA1A4Y4 181 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 CCL8P80075 99 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 TMEM155Q4W5P6 130 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 S100A7L2Q5SY68 101 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 LCE1DQ5T752 114 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 C6orf201Q7Z4U5 140 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 ZNF491Q8N8L2 437 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 H1FXQ92522 213 aaKnown RBP3.47□□□□□ -1.85
ZNF560-201ENST00000301480 TMEM230Q96A57 120 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 CSPG4Q6UVK1 2322 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 IGKV1D-42A0A075B6H8 117 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 TRBV5-5A0A0J9YX44 114 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 SCO2A0A1W2PP80 73 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 LINC00313P59037 77 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 UBE2L3P68036 154 aaKnown RBP3.47□□□□□ -1.85
ZNF560-201ENST00000301480 FOXL2NBQ6ZUU3 175 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 C11orf72Q8NBR9 251 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 MAPK1IP1LQ8NDC0 245 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 C4orf45Q96LM5 186 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 KRTAP4-9Q9BYQ8 210 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 PCNX3Q9H6A9 2034 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 TRAV9-1A0A075B6T8 112 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 UBE2L5PA0A1B0GUS4 154 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 H3BVH4 76 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 PSMB2P49721 201 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 SSBP1Q04837 148 aaKnown RBP3.47□□□□□ -1.85
ZNF560-201ENST00000301480 FHL2Q14192 279 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 LINC01545Q5VT33 79 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 Q6ZS49 121 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 SERP2Q8N6R1 65 aa3.47□□□□□ -1.85
ZNF560-201ENST00000301480 ZNF469Q96JG9 3925 aaPredicted RBP3.46□□□□□ -1.86
ZNF560-201ENST00000301480 USF3Q68DE3 2245 aa3.46□□□□□ -1.86
ZNF560-201ENST00000301480 TRBV27A0A0K0K1C4 114 aa3.46□□□□□ -1.86
ZNF560-201ENST00000301480 CEBPZOSA8MTT3 80 aa3.46□□□□□ -1.86
ZNF560-201ENST00000301480 H0Y9J4 135 aa3.46□□□□□ -1.86
ZNF560-201ENST00000301480 FSHBP01225 129 aa3.46□□□□□ -1.86
ZNF560-201ENST00000301480 FRMD6-AS1P0C7T7 363 aa3.46□□□□□ -1.86
ZNF560-201ENST00000301480 RNASE2P10153 161 aaKnown RBP3.46□□□□□ -1.86
ZNF560-201ENST00000301480 LMO4P61968 165 aa3.46□□□□□ -1.86
ZNF560-201ENST00000301480 FAM27BQ5VT28 67 aa3.46□□□□□ -1.86
ZNF560-201ENST00000301480 FAM57BQ71RH2 274 aa3.46□□□□□ -1.86
ZNF560-201ENST00000301480 MGST2Q99735 147 aa3.46□□□□□ -1.86
ZNF560-201ENST00000301480 HDHD3Q9BSH5 251 aaPredicted RBP3.46□□□□□ -1.86
ZNF560-201ENST00000301480 ZNF747Q9BV97 191 aa3.46□□□□□ -1.86
ZNF560-201ENST00000301480 LINC00588Q9Y4M8 146 aa3.46□□□□□ -1.86
ZNF560-201ENST00000301480 TRAV1-2A0A0B4J238 106 aa3.46□□□□□ -1.86
ZNF560-201ENST00000301480 TCRBV4S1A1TA0A5B7 111 aa3.46□□□□□ -1.86
ZNF560-201ENST00000301480 KLLNB2CW77 178 aa3.46□□□□□ -1.86
ZNF560-201ENST00000301480 K7EMI3 77 aa3.46□□□□□ -1.86
ZNF560-201ENST00000301480 UBE2L6O14933 153 aa3.46□□□□□ -1.86
ZNF560-201ENST00000301480 CCKP06307 115 aa3.46□□□□□ -1.86
ZNF560-201ENST00000301480 SUMO2P61956 95 aaKnown RBP3.46□□□□□ -1.86
ZNF560-201ENST00000301480 HIST1H4AP62805 103 aaKnown RBP3.46□□□□□ -1.86
ZNF560-201ENST00000301480 OR5AS1Q8N127 324 aa3.46□□□□□ -1.86
ZNF560-201ENST00000301480 TMEM252Q8N6L7 170 aa3.46□□□□□ -1.86
ZNF560-201ENST00000301480 TAF15Q92804 592 aaKnown RBP eCLIP3.46□□□□□ -1.86
ZNF560-201ENST00000301480 TMEM243Q9BU79 118 aa3.46□□□□□ -1.86
ZNF560-201ENST00000301480 ABCA1O95477 2261 aa3.45□□□□□ -1.86
ZNF560-201ENST00000301480 GCHFRP30047 84 aa3.45□□□□□ -1.86
ZNF560-201ENST00000301480 REG3AQ06141 175 aa3.45□□□□□ -1.86
ZNF560-201ENST00000301480 MORN5Q5VZ52 161 aa3.45□□□□□ -1.86
ZNF560-201ENST00000301480 LINC00173Q6ZV60 143 aa3.45□□□□□ -1.86
ZNF560-201ENST00000301480 COPS9Q8WXC6 57 aa3.45□□□□□ -1.86
ZNF560-201ENST00000301480 VSIG2Q96IQ7 327 aa3.45□□□□□ -1.86
ZNF560-201ENST00000301480 JMJD1CQ15652 2540 aa3.45□□□□□ -1.86
ZNF560-201ENST00000301480 LOC100131303A0A0U1RQF7 123 aa3.45□□□□□ -1.86
ZNF560-201ENST00000301480 NDUFB3O43676 98 aa3.45□□□□□ -1.86
ZNF560-201ENST00000301480 LEPROTL1O95214 131 aa3.45□□□□□ -1.86
ZNF560-201ENST00000301480 C12orf73Q69YU5 71 aa3.45□□□□□ -1.86
ZNF560-201ENST00000301480 ZFP2Q6ZN57 461 aa3.45□□□□□ -1.86
ZNF560-201ENST00000301480 Q6ZPA2 131 aa3.45□□□□□ -1.86
ZNF560-201ENST00000301480 Q6ZSV7 163 aa3.45□□□□□ -1.86
ZNF560-201ENST00000301480 ZNF329Q86UD4 541 aa3.45□□□□□ -1.86
ZNF560-201ENST00000301480 FAM223AQ8IWN6 122 aa3.45□□□□□ -1.86
ZNF560-201ENST00000301480 MAP1AP78559 2803 aaPredicted RBP3.44□□□□□ -1.86
ZNF560-201ENST00000301480 COX7A2LO14548 114 aa3.44□□□□□ -1.86
ZNF560-201ENST00000301480 LTAP01374 205 aa3.44□□□□□ -1.86
ZNF560-201ENST00000301480 MGST1P10620 155 aaKnown RBP3.44□□□□□ -1.86
ZNF560-201ENST00000301480 Q6ZVQ6 151 aa3.44□□□□□ -1.86
ZNF560-201ENST00000301480 MPLKIPQ8TAP9 179 aa3.44□□□□□ -1.86
ZNF560-201ENST00000301480 RNF185Q96GF1 192 aa3.44□□□□□ -1.86
ZNF560-201ENST00000301480 ANK2Q01484 3957 aa3.44□□□□□ -1.86
ZNF560-201ENST00000301480 FREM1Q5H8C1 2179 aa3.44□□□□□ -1.86
ZNF560-201ENST00000301480 COL6A5A8TX70 2615 aa3.44□□□□□ -1.86
ZNF560-201ENST00000301480 A0A087WZ39 114 aa3.44□□□□□ -1.86
ZNF560-201ENST00000301480 C19orf71A6NCJ1 209 aa3.44□□□□□ -1.86
ZNF560-201ENST00000301480 RNASE1P07998 156 aaKnown RBP3.44□□□□□ -1.86
ZNF560-201ENST00000301480 MP68P56378 58 aa3.44□□□□□ -1.86
ZNF560-201ENST00000301480 SYNJ2BPP57105 145 aa3.44□□□□□ -1.86
ZNF560-201ENST00000301480 LYPD5Q6UWN5 251 aa3.44□□□□□ -1.86
ZNF560-201ENST00000301480 LCA10Q71F78 164 aa3.44□□□□□ -1.86
ZNF560-201ENST00000301480 PHF5AQ7RTV0 110 aaKnown RBP3.44□□□□□ -1.86
ZNF560-201ENST00000301480 C5orf38Q86SI9 138 aa3.44□□□□□ -1.86
ZNF560-201ENST00000301480 ZNF645Q8N7E2 425 aa3.44□□□□□ -1.86
ZNF560-201ENST00000301480 MAPKAPK5-AS1Q8N8E1 139 aa3.44□□□□□ -1.86
ZNF560-201ENST00000301480 NTN5Q8WTR8 489 aaPredicted RBP3.44□□□□□ -1.86
ZNF560-201ENST00000301480 Q9HAA7 133 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms